RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 FAM174AQ8TBP5 190 aa7.89□□□□□ -1.15
VRK2-208ENST00000463222 FOXD4L4Q8WXT5 416 aaPredicted RBP7.89□□□□□ -1.15
VRK2-208ENST00000463222 SPSB2Q99619 263 aa7.89□□□□□ -1.15
VRK2-208ENST00000463222 RPIAP49247 311 aa7.88□□□□□ -1.15
VRK2-208ENST00000463222 CRIPAKQ8N1N5 446 aa7.88□□□□□ -1.15
VRK2-208ENST00000463222 IVNS1ABPQ9Y6Y0 642 aa7.88□□□□□ -1.15
VRK2-208ENST00000463222 ZC3H4Q9UPT8 1303 aaKnown RBP7.87□□□□□ -1.15
VRK2-208ENST00000463222 USP17L3A6NCW0 530 aa7.87□□□□□ -1.15
VRK2-208ENST00000463222 USP17L4A6NCW7 530 aa7.87□□□□□ -1.15
VRK2-208ENST00000463222 CCNYL3P0C7X3 344 aa7.87□□□□□ -1.15
VRK2-208ENST00000463222 KCNH2Q12809 1159 aa7.87□□□□□ -1.15
VRK2-208ENST00000463222 USP17L2Q6R6M4 530 aa7.87□□□□□ -1.15
VRK2-208ENST00000463222 USP17L1Q7RTZ2 530 aa7.87□□□□□ -1.15
VRK2-208ENST00000463222 PRDM9Q9NQV7 894 aa7.87□□□□□ -1.15
VRK2-208ENST00000463222 EVA1BQ9NVM1 165 aa7.87□□□□□ -1.15
VRK2-208ENST00000463222 PKD2L1Q9P0L9 805 aa7.87□□□□□ -1.15
VRK2-208ENST00000463222 CEP126Q9P2H0 1117 aa7.87□□□□□ -1.15
VRK2-208ENST00000463222 PCDHB9Q9Y5E1 797 aa7.87□□□□□ -1.15
VRK2-208ENST00000463222 USP17L5A8MUK1 530 aa7.86□□□□□ -1.15
VRK2-208ENST00000463222 POTECB2RU33 542 aa7.86□□□□□ -1.15
VRK2-208ENST00000463222 PTK2Q05397 1052 aa7.86□□□□□ -1.15
VRK2-208ENST00000463222 TMEM164Q5U3C3 297 aa7.86□□□□□ -1.15
VRK2-208ENST00000463222 NFATC2IPQ8NCF5 419 aa7.86□□□□□ -1.15
VRK2-208ENST00000463222 STK32AQ8WU08 396 aa7.86□□□□□ -1.15
VRK2-208ENST00000463222 NUDT12Q9BQG2 462 aa7.86□□□□□ -1.15
VRK2-208ENST00000463222 OCSTAMPQ9BR26 566 aa7.86□□□□□ -1.15
VRK2-208ENST00000463222 AAASQ9NRG9 546 aa7.86□□□□□ -1.15
VRK2-208ENST00000463222 ZMIZ1Q9ULJ6 1067 aa7.86□□□□□ -1.15
VRK2-208ENST00000463222 NOVA2Q9UNW9 492 aaKnown RBP7.86□□□□□ -1.15
VRK2-208ENST00000463222 DXOO77932 396 aaKnown RBP7.85□□□□□ -1.15
VRK2-208ENST00000463222 SLFNL1Q499Z3 407 aa7.85□□□□□ -1.15
VRK2-208ENST00000463222 MSS51Q4VC12 460 aa7.85□□□□□ -1.15
VRK2-208ENST00000463222 PDXDC2PQ6P474 469 aa7.85□□□□□ -1.15
VRK2-208ENST00000463222 MKRN1Q9UHC7 482 aaKnown RBP7.85□□□□□ -1.15
VRK2-208ENST00000463222 AVPP01185 164 aa7.84□□□□□ -1.15
VRK2-208ENST00000463222 ELOAQ14241 798 aaKnown RBP7.84□□□□□ -1.15
VRK2-208ENST00000463222 PLEKHM2Q8IWE5 1019 aa7.84□□□□□ -1.15
VRK2-208ENST00000463222 ARMC2Q8NEN0 867 aa7.84□□□□□ -1.15
VRK2-208ENST00000463222 ZNF428Q96B54 188 aa7.84□□□□□ -1.15
VRK2-208ENST00000463222 ST8SIA5O15466 376 aa7.83□□□□□ -1.16
VRK2-208ENST00000463222 MMP16P51512 607 aa7.83□□□□□ -1.16
VRK2-208ENST00000463222 TSGA10IPQ3SY00 556 aa7.83□□□□□ -1.16
VRK2-208ENST00000463222 CRTC2Q53ET0 693 aaPredicted RBP7.83□□□□□ -1.16
VRK2-208ENST00000463222 RNF135Q8IUD6 432 aa7.83□□□□□ -1.16
VRK2-208ENST00000463222 PHTF2Q8N3S3 785 aa7.83□□□□□ -1.16
VRK2-208ENST00000463222 CCDC24Q8N4L8 307 aa7.83□□□□□ -1.16
VRK2-208ENST00000463222 TOR4AQ9NXH8 423 aa7.83□□□□□ -1.16
VRK2-208ENST00000463222 GPSM3Q9Y4H4 160 aa7.83□□□□□ -1.16
VRK2-208ENST00000463222 RASA1P20936 1047 aa7.82□□□□□ -1.16
VRK2-208ENST00000463222 NCOA4Q13772 614 aa7.82□□□□□ -1.16
VRK2-208ENST00000463222 LCE2AQ5TA79 106 aaPredicted RBP7.82□□□□□ -1.16
VRK2-208ENST00000463222 PTCRAQ6ISU1 281 aaPredicted RBP7.82□□□□□ -1.16
VRK2-208ENST00000463222 ADAM32Q8TC27 787 aa7.82□□□□□ -1.16
VRK2-208ENST00000463222 ARHGAP9Q9BRR9 750 aa7.82□□□□□ -1.16
VRK2-208ENST00000463222 FCF1Q9Y324 198 aaKnown RBP7.82□□□□□ -1.16
VRK2-208ENST00000463222 USP17L15C9J2P7 530 aa7.81□□□□□ -1.16
VRK2-208ENST00000463222 USP17L10C9JJH3 530 aa7.81□□□□□ -1.16
VRK2-208ENST00000463222 USP17L13C9JLJ4 530 aa7.81□□□□□ -1.16
VRK2-208ENST00000463222 USP17L12C9JPN9 530 aa7.81□□□□□ -1.16
VRK2-208ENST00000463222 USP17L11C9JVI0 530 aa7.81□□□□□ -1.16
VRK2-208ENST00000463222 USP17L21D6R901 530 aa7.81□□□□□ -1.16
VRK2-208ENST00000463222 USP17L18D6R9N7 530 aa7.81□□□□□ -1.16
VRK2-208ENST00000463222 USP17L22D6RA61 530 aa7.81□□□□□ -1.16
VRK2-208ENST00000463222 USP17L17D6RBQ6 530 aa7.81□□□□□ -1.16
VRK2-208ENST00000463222 USP17L19D6RCP7 530 aa7.81□□□□□ -1.16
VRK2-208ENST00000463222 USP17L20D6RJB6 530 aa7.81□□□□□ -1.16
VRK2-208ENST00000463222 CD2BP2O95400 341 aaKnown RBP7.81□□□□□ -1.16
VRK2-208ENST00000463222 USP17L24Q0WX57 530 aa7.81□□□□□ -1.16
VRK2-208ENST00000463222 CTC1Q2NKJ3 1217 aa7.81□□□□□ -1.16
VRK2-208ENST00000463222 LARP1Q6PKG0 1096 aaKnown RBP7.81□□□□□ -1.16
VRK2-208ENST00000463222 TREML4Q6UXN2 200 aa7.81□□□□□ -1.16
VRK2-208ENST00000463222 PLPP7Q8NBV4 271 aa7.81□□□□□ -1.16
VRK2-208ENST00000463222 RBM25P49756 843 aaKnown RBP7.8□□□□□ -1.16
VRK2-208ENST00000463222 FOXC1Q12948 553 aa7.8□□□□□ -1.16
VRK2-208ENST00000463222 NBPF14Q5TI25 921 aa7.8□□□□□ -1.16
VRK2-208ENST00000463222 PHLDB3Q6NSJ2 640 aa7.8□□□□□ -1.16
VRK2-208ENST00000463222 ZBTB33Q86T24 672 aa7.8□□□□□ -1.16
VRK2-208ENST00000463222 GPKOWQ92917 476 aaPredicted RBP eCLIP7.8□□□□□ -1.16
VRK2-208ENST00000463222 SLAIN2Q9P270 581 aa7.8□□□□□ -1.16
VRK2-208ENST00000463222 FAM196BA6NMK8 535 aa7.79□□□□□ -1.16
VRK2-208ENST00000463222 SMCPP49901 116 aaPredicted RBP7.79□□□□□ -1.16
VRK2-208ENST00000463222 MCCD1P59942 119 aaPredicted RBP7.79□□□□□ -1.16
VRK2-208ENST00000463222 PTK7Q13308 1070 aa7.79□□□□□ -1.16
VRK2-208ENST00000463222 CCDC27Q2M243 656 aa7.79□□□□□ -1.16
VRK2-208ENST00000463222 SND1Q7KZF4 910 aaKnown RBP eCLIP7.79□□□□□ -1.16
VRK2-208ENST00000463222 FAM200AQ8TCP9 573 aa7.79□□□□□ -1.16
VRK2-208ENST00000463222 UNC93B1Q9H1C4 597 aa7.79□□□□□ -1.16
VRK2-208ENST00000463222 ATP5J2-PTCD1G3V325 749 aa7.78□□□□□ -1.16
VRK2-208ENST00000463222 B4GALNT3Q6L9W6 998 aa7.78□□□□□ -1.16
VRK2-208ENST00000463222 DZIP3Q86Y13 1208 aaKnown RBP7.78□□□□□ -1.16
VRK2-208ENST00000463222 CARD14Q9BXL6 1004 aa7.78□□□□□ -1.16
VRK2-208ENST00000463222 MAGEB6P1A0A0J9YX57 407 aa7.77□□□□□ -1.17
VRK2-208ENST00000463222 ANKMY2Q8IV38 441 aa7.77□□□□□ -1.17
VRK2-208ENST00000463222 CYP4X1Q8N118 509 aa7.77□□□□□ -1.17
VRK2-208ENST00000463222 CDCA7Q9BWT1 371 aaPredicted RBP7.77□□□□□ -1.17
VRK2-208ENST00000463222 GNEQ9Y223 722 aaKnown RBP7.77□□□□□ -1.17
VRK2-208ENST00000463222 FAM69CQ0P6D2 419 aa7.76□□□□□ -1.17
VRK2-208ENST00000463222 EML3Q32P44 896 aa7.76□□□□□ -1.17
VRK2-208ENST00000463222 MAP7D1Q3KQU3 841 aa7.76□□□□□ -1.17
VRK2-208ENST00000463222 SH3BP5LQ7L8J4 393 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms