RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 IL13P35225 146 aa19.26■□□□□ 0.67
COL6A1-202ENST00000463060 AMPHP49418 695 aa19.26■□□□□ 0.67
COL6A1-202ENST00000463060 KIAA0232Q92628 1395 aa19.26■□□□□ 0.67
COL6A1-202ENST00000463060 AXIN2Q9Y2T1 843 aa19.25■□□□□ 0.67
COL6A1-202ENST00000463060 ABCC6O95255 1503 aa19.25■□□□□ 0.67
COL6A1-202ENST00000463060 DIAPH1O60610 1272 aaKnown RBP19.24■□□□□ 0.67
COL6A1-202ENST00000463060 FAM83GA6ND36 823 aa19.23■□□□□ 0.67
COL6A1-202ENST00000463060 EIF4A2Q14240 407 aaKnown RBP19.23■□□□□ 0.67
COL6A1-202ENST00000463060 LMO7Q8WWI1 1683 aa19.22■□□□□ 0.67
COL6A1-202ENST00000463060 BLMP54132 1417 aaPredicted RBP19.22■□□□□ 0.67
COL6A1-202ENST00000463060 CHRNA2Q15822 529 aa19.21■□□□□ 0.67
COL6A1-202ENST00000463060 ADAMTS8Q9UP79 889 aa19.21■□□□□ 0.67
COL6A1-202ENST00000463060 SPATA31A6Q5VVP1 1343 aa19.21■□□□□ 0.67
COL6A1-202ENST00000463060 HAP1P54257 671 aaPredicted RBP19.2■□□□□ 0.66
COL6A1-202ENST00000463060 PRDM11Q9NQV5 511 aa19.2■□□□□ 0.66
COL6A1-202ENST00000463060 RGPD5Q99666 1765 aa19.19■□□□□ 0.66
COL6A1-202ENST00000463060 FAM9BQ8IZU0 186 aa19.19■□□□□ 0.66
COL6A1-202ENST00000463060 NUDCQ9Y266 331 aa19.19■□□□□ 0.66
COL6A1-202ENST00000463060 CAMTA1Q9Y6Y1 1673 aa19.19■□□□□ 0.66
COL6A1-202ENST00000463060 RGPD1P0DJD0 1748 aa19.19■□□□□ 0.66
COL6A1-202ENST00000463060 ZBTB7CA1YPR0 619 aa19.18■□□□□ 0.66
COL6A1-202ENST00000463060 WDR43Q15061 677 aaKnown RBP eCLIP19.16■□□□□ 0.66
COL6A1-202ENST00000463060 ANKRD24Q8TF21 1146 aa19.16■□□□□ 0.66
COL6A1-202ENST00000463060 EYA1Q99502 592 aa19.16■□□□□ 0.66
COL6A1-202ENST00000463060 ERBB3P21860 1342 aa19.16■□□□□ 0.66
COL6A1-202ENST00000463060 COL14A1Q05707 1796 aaKnown RBP19.16■□□□□ 0.66
COL6A1-202ENST00000463060 LRP6O75581 1613 aa19.15■□□□□ 0.66
COL6A1-202ENST00000463060 NUTM2BA6NNL0 878 aaPredicted RBP19.15■□□□□ 0.66
COL6A1-202ENST00000463060 NUTM2EB1AL46 878 aaPredicted RBP19.15■□□□□ 0.66
COL6A1-202ENST00000463060 NUTM2AQ8IVF1 878 aaPredicted RBP19.15■□□□□ 0.66
COL6A1-202ENST00000463060 IGSF1Q8N6C5 1336 aa19.15■□□□□ 0.66
COL6A1-202ENST00000463060 NCAPD2Q15021 1401 aa19.15■□□□□ 0.66
COL6A1-202ENST00000463060 U2SURPO15042 1029 aaKnown RBP19.14■□□□□ 0.65
COL6A1-202ENST00000463060 ADAMTS2O95450 1211 aa19.14■□□□□ 0.65
COL6A1-202ENST00000463060 U2AF1L5P0DN76 240 aaPredicted RBP19.14■□□□□ 0.65
COL6A1-202ENST00000463060 U2AF1Q01081 240 aaKnown RBP eCLIP19.14■□□□□ 0.65
COL6A1-202ENST00000463060 FCHSD2O94868 740 aa19.13■□□□□ 0.65
COL6A1-202ENST00000463060 NBPF6Q5VWK0 638 aa19.13■□□□□ 0.65
COL6A1-202ENST00000463060 LTV1Q96GA3 475 aaPredicted RBP19.13■□□□□ 0.65
COL6A1-202ENST00000463060 NBPF4Q96M43 638 aa19.13■□□□□ 0.65
COL6A1-202ENST00000463060 COL5A2P05997 1499 aaPredicted RBP19.13■□□□□ 0.65
COL6A1-202ENST00000463060 KDRP35968 1356 aa19.12■□□□□ 0.65
COL6A1-202ENST00000463060 PLEKHF1Q96S99 279 aa19.12■□□□□ 0.65
COL6A1-202ENST00000463060 RSPH6AQ9H0K4 717 aa19.12■□□□□ 0.65
COL6A1-202ENST00000463060 SLIT2O94813 1529 aa19.11■□□□□ 0.65
COL6A1-202ENST00000463060 BTG4Q9NY30 223 aa19.11■□□□□ 0.65
COL6A1-202ENST00000463060 WDR17Q8IZU2 1322 aa19.1■□□□□ 0.65
COL6A1-202ENST00000463060 AEBP1Q8IUX7 1158 aa19.1■□□□□ 0.65
COL6A1-202ENST00000463060 RGPD2P0DJD1 1756 aa19.1■□□□□ 0.65
COL6A1-202ENST00000463060 SULT6B1Q6IMI4 303 aa19.09■□□□□ 0.65
COL6A1-202ENST00000463060 FNBP4Q8N3X1 1017 aaPredicted RBP19.09■□□□□ 0.65
COL6A1-202ENST00000463060 PLCH1Q4KWH8 1693 aa19.08■□□□□ 0.65
COL6A1-202ENST00000463060 HMOX1P09601 288 aa19.08■□□□□ 0.64
COL6A1-202ENST00000463060 FAM208AQ9UK61 1670 aaKnown RBP19.08■□□□□ 0.64
COL6A1-202ENST00000463060 RUNDC1Q96C34 613 aa19.07■□□□□ 0.64
COL6A1-202ENST00000463060 NWD2Q9ULI1 1742 aa19.07■□□□□ 0.64
COL6A1-202ENST00000463060 NRAPQ86VF7 1730 aa19.06■□□□□ 0.64
COL6A1-202ENST00000463060 LARP1Q6PKG0 1096 aaKnown RBP19.06■□□□□ 0.64
COL6A1-202ENST00000463060 CARD10Q9BWT7 1032 aa19.06■□□□□ 0.64
COL6A1-202ENST00000463060 BCL9LQ86UU0 1499 aa19.05■□□□□ 0.64
COL6A1-202ENST00000463060 PRKAR2BP31323 418 aa19.05■□□□□ 0.64
COL6A1-202ENST00000463060 EVA1CP58658 441 aa19.05■□□□□ 0.64
COL6A1-202ENST00000463060 CCDC146Q8IYE0 955 aa19.05■□□□□ 0.64
COL6A1-202ENST00000463060 USHBP1Q8N6Y0 703 aa19.05■□□□□ 0.64
COL6A1-202ENST00000463060 PHACTR3Q96KR7 559 aa19.05■□□□□ 0.64
COL6A1-202ENST00000463060 PNNQ9H307 717 aaKnown RBP19.05■□□□□ 0.64
COL6A1-202ENST00000463060 NLRP2Q9NX02 1062 aa19.05■□□□□ 0.64
COL6A1-202ENST00000463060 NGLY1Q96IV0 654 aa19.04■□□□□ 0.64
COL6A1-202ENST00000463060 C8orf37Q96NL8 207 aa19.04■□□□□ 0.64
COL6A1-202ENST00000463060 CRB1P82279 1406 aa19.03■□□□□ 0.64
COL6A1-202ENST00000463060 CSB-PGBD3P0DP91 1061 aa19.03■□□□□ 0.64
COL6A1-202ENST00000463060 STRN4Q9NRL3 753 aa19.03■□□□□ 0.64
COL6A1-202ENST00000463060 NCBP3Q53F19 620 aaKnown RBP19.02■□□□□ 0.64
COL6A1-202ENST00000463060 TOM1L2Q6ZVM7 507 aa19.02■□□□□ 0.64
COL6A1-202ENST00000463060 UNC5CLQ8IV45 518 aa19.02■□□□□ 0.64
COL6A1-202ENST00000463060 TCP11L2Q8N4U5 519 aa19.02■□□□□ 0.64
COL6A1-202ENST00000463060 APAF1O14727 1248 aa19.01■□□□□ 0.63
COL6A1-202ENST00000463060 PLEKHG2Q9H7P9 1386 aa19■□□□□ 0.63
COL6A1-202ENST00000463060 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.99■□□□□ 0.63
COL6A1-202ENST00000463060 SPATA31A5Q5VU36 1347 aa18.99■□□□□ 0.63
COL6A1-202ENST00000463060 SPATA31A7Q8IWB4 1347 aa18.99■□□□□ 0.63
COL6A1-202ENST00000463060 TMPOP42166 694 aaKnown RBP18.98■□□□□ 0.63
COL6A1-202ENST00000463060 HNRNPUQ00839 825 aaKnown RBP eCLIP18.98■□□□□ 0.63
COL6A1-202ENST00000463060 VPS72Q15906 364 aa18.98■□□□□ 0.63
COL6A1-202ENST00000463060 MEX3CQ5U5Q3 659 aaKnown RBP18.98■□□□□ 0.63
COL6A1-202ENST00000463060 NGEFQ8N5V2 710 aa18.98■□□□□ 0.63
COL6A1-202ENST00000463060 PHF23Q9BUL5 403 aaPredicted RBP18.98■□□□□ 0.63
COL6A1-202ENST00000463060 AFF2P51816 1311 aa18.98■□□□□ 0.63
COL6A1-202ENST00000463060 SPATA31A1Q5TZJ5 1347 aa18.98■□□□□ 0.63
COL6A1-202ENST00000463060 NFE2L2Q16236 605 aa18.97■□□□□ 0.63
COL6A1-202ENST00000463060 USP21Q9UK80 565 aa18.97■□□□□ 0.63
COL6A1-202ENST00000463060 MEGF6O75095 1541 aa18.96■□□□□ 0.63
COL6A1-202ENST00000463060 MTHFSDQ2M296 383 aaKnown RBP18.96■□□□□ 0.63
COL6A1-202ENST00000463060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.96■□□□□ 0.63
COL6A1-202ENST00000463060 DISP2A7MBM2 1401 aa18.96■□□□□ 0.63
COL6A1-202ENST00000463060 MAPK8IP3Q9UPT6 1336 aa18.96■□□□□ 0.63
COL6A1-202ENST00000463060 SENP3-EIF4A1A0A087X0R7 540 aa18.95■□□□□ 0.62
COL6A1-202ENST00000463060 CCDC27Q2M243 656 aa18.95■□□□□ 0.62
COL6A1-202ENST00000463060 YTHDC1Q96MU7 727 aaKnown RBP18.95■□□□□ 0.62
COL6A1-202ENST00000463060 THRAP3Q9Y2W1 955 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms