RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 MAP3K19Q56UN5 1328 aa27.65■■■□□ 2.02
NUP43-205ENST00000463048 AATKQ6ZMQ8 1374 aa27.64■■■□□ 2.02
NUP43-205ENST00000463048 RGPD5Q99666 1765 aa27.64■■■□□ 2.02
NUP43-205ENST00000463048 LMO7Q8WWI1 1683 aa27.64■■■□□ 2.02
NUP43-205ENST00000463048 NRAPQ86VF7 1730 aa27.64■■■□□ 2.01
NUP43-205ENST00000463048 PPM1GO15355 546 aaPredicted RBP27.63■■■□□ 2.01
NUP43-205ENST00000463048 AMPHP49418 695 aa27.63■■■□□ 2.01
NUP43-205ENST00000463048 COL18A1P39060 1754 aa27.63■■■□□ 2.01
NUP43-205ENST00000463048 TRPC5Q9UL62 973 aaPredicted RBP27.61■■■□□ 2.01
NUP43-205ENST00000463048 EMILIN1Q9Y6C2 1016 aa27.61■■■□□ 2.01
NUP43-205ENST00000463048 LTV1Q96GA3 475 aaPredicted RBP27.6■■■□□ 2.01
NUP43-205ENST00000463048 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.6■■■□□ 2.01
NUP43-205ENST00000463048 ATRNO75882 1429 aa27.58■■■□□ 2.01
NUP43-205ENST00000463048 CSB-PGBD3P0DP91 1061 aa27.58■■■□□ 2.01
NUP43-205ENST00000463048 LARP1Q6PKG0 1096 aaKnown RBP27.58■■■□□ 2.01
NUP43-205ENST00000463048 COL5A2P05997 1499 aaPredicted RBP27.57■■■□□ 2
NUP43-205ENST00000463048 USP35Q9P2H5 1018 aa27.57■■■□□ 2
NUP43-205ENST00000463048 MAP2P11137 1827 aaKnown RBP27.57■■■□□ 2
NUP43-205ENST00000463048 PEAK1Q9H792 1746 aa27.56■■■□□ 2
NUP43-205ENST00000463048 HOXC9P31274 260 aa27.56■■■□□ 2
NUP43-205ENST00000463048 VPS72Q15906 364 aa27.56■■■□□ 2
NUP43-205ENST00000463048 IP6K1Q92551 441 aa27.56■■■□□ 2
NUP43-205ENST00000463048 RXRBP28702 533 aa27.55■■■□□ 2
NUP43-205ENST00000463048 GJD4Q96KN9 370 aaPredicted RBP27.54■■■□□ 2
NUP43-205ENST00000463048 POLKQ9UBT6 870 aa27.54■■■□□ 2
NUP43-205ENST00000463048 ANKRD24Q8TF21 1146 aa27.53■■■□□ 2
NUP43-205ENST00000463048 NPC1L1Q9UHC9 1359 aa27.52■■■□□ 2
NUP43-205ENST00000463048 RBM6P78332 1123 aaKnown RBP27.52■■■□□ 2
NUP43-205ENST00000463048 HSP90AB2PQ58FF8 381 aa27.52■■■□□ 2
NUP43-205ENST00000463048 TOM1L2Q6ZVM7 507 aa27.52■■■□□ 2
NUP43-205ENST00000463048 GLI3P10071 1580 aa27.5■■□□□ 1.99
NUP43-205ENST00000463048 ABCC6O95255 1503 aa27.5■■□□□ 1.99
NUP43-205ENST00000463048 RTL1A6NKG5 1358 aa27.49■■□□□ 1.99
NUP43-205ENST00000463048 FLT4P35916 1363 aa27.49■■□□□ 1.99
NUP43-205ENST00000463048 SPATA31A5Q5VU36 1347 aa27.49■■□□□ 1.99
NUP43-205ENST00000463048 SPATA31A7Q8IWB4 1347 aa27.49■■□□□ 1.99
NUP43-205ENST00000463048 WDR17Q8IZU2 1322 aa27.49■■□□□ 1.99
NUP43-205ENST00000463048 NLRP2Q9NX02 1062 aa27.49■■□□□ 1.99
NUP43-205ENST00000463048 BLMP54132 1417 aaPredicted RBP27.49■■□□□ 1.99
NUP43-205ENST00000463048 A0A0G2JS52 829 aa27.48■■□□□ 1.99
NUP43-205ENST00000463048 MYT1Q01538 1121 aa27.48■■□□□ 1.99
NUP43-205ENST00000463048 ERBB3P21860 1342 aa27.47■■□□□ 1.99
NUP43-205ENST00000463048 SPATA31A1Q5TZJ5 1347 aa27.47■■□□□ 1.99
NUP43-205ENST00000463048 FAM98CQ17RN3 349 aaKnown RBP27.47■■□□□ 1.99
NUP43-205ENST00000463048 ILDR2Q71H61 639 aa27.47■■□□□ 1.99
NUP43-205ENST00000463048 CRB1P82279 1406 aa27.46■■□□□ 1.99
NUP43-205ENST00000463048 MTHFSP49914 203 aa27.44■■□□□ 1.98
NUP43-205ENST00000463048 INSRP06213 1382 aa27.44■■□□□ 1.98
NUP43-205ENST00000463048 RGPD2P0DJD1 1756 aa27.43■■□□□ 1.98
NUP43-205ENST00000463048 KIF24Q5T7B8 1368 aa27.42■■□□□ 1.98
NUP43-205ENST00000463048 SMG6Q86US8 1419 aaKnown RBP27.41■■□□□ 1.98
NUP43-205ENST00000463048 TCP11L2Q8N4U5 519 aa27.41■■□□□ 1.98
NUP43-205ENST00000463048 USHBP1Q8N6Y0 703 aa27.41■■□□□ 1.98
NUP43-205ENST00000463048 RGS12O14924 1447 aa27.41■■□□□ 1.98
NUP43-205ENST00000463048 PPP2R1AP30153 589 aa27.4■■□□□ 1.98
NUP43-205ENST00000463048 CARD10Q9BWT7 1032 aa27.39■■□□□ 1.98
NUP43-205ENST00000463048 SEPT12Q8IYM1 358 aa27.38■■□□□ 1.97
NUP43-205ENST00000463048 CDK12Q9NYV4 1490 aaPredicted RBP27.38■■□□□ 1.97
NUP43-205ENST00000463048 PARD3Q8TEW0 1356 aa27.37■■□□□ 1.97
NUP43-205ENST00000463048 EIF4A2Q14240 407 aaKnown RBP27.37■■□□□ 1.97
NUP43-205ENST00000463048 NBPF6Q5VWK0 638 aa27.37■■□□□ 1.97
NUP43-205ENST00000463048 NBPF4Q96M43 638 aa27.37■■□□□ 1.97
NUP43-205ENST00000463048 FAM208AQ9UK61 1670 aaKnown RBP27.36■■□□□ 1.97
NUP43-205ENST00000463048 RALBP1Q15311 655 aa27.33■■□□□ 1.97
NUP43-205ENST00000463048 THRAP3Q9Y2W1 955 aaKnown RBP27.33■■□□□ 1.97
NUP43-205ENST00000463048 BARGINQ6ZT62 677 aa27.32■■□□□ 1.96
NUP43-205ENST00000463048 EYA1Q99502 592 aa27.31■■□□□ 1.96
NUP43-205ENST00000463048 BRWD3Q6RI45 1802 aa27.3■■□□□ 1.96
NUP43-205ENST00000463048 WNK3Q9BYP7 1800 aa27.3■■□□□ 1.96
NUP43-205ENST00000463048 ONECUT3O60422 494 aaPredicted RBP27.3■■□□□ 1.96
NUP43-205ENST00000463048 THSD7AQ9UPZ6 1657 aa27.3■■□□□ 1.96
NUP43-205ENST00000463048 PRKRIP1Q9H875 184 aaPredicted RBP27.29■■□□□ 1.96
NUP43-205ENST00000463048 DIAPH1O60610 1272 aaKnown RBP27.28■■□□□ 1.96
NUP43-205ENST00000463048 CFAP53Q96M91 514 aa27.28■■□□□ 1.96
NUP43-205ENST00000463048 IL2RBP14784 551 aa27.27■■□□□ 1.96
NUP43-205ENST00000463048 IL13P35225 146 aa27.27■■□□□ 1.96
NUP43-205ENST00000463048 FAM182BQ5T319 152 aa27.26■■□□□ 1.95
NUP43-205ENST00000463048 COL3A1P02461 1466 aaPredicted RBP27.25■■□□□ 1.95
NUP43-205ENST00000463048 DISP2A7MBM2 1401 aa27.24■■□□□ 1.95
NUP43-205ENST00000463048 MYBBP1AQ9BQG0 1328 aaKnown RBP27.24■■□□□ 1.95
NUP43-205ENST00000463048 U2SURPO15042 1029 aaKnown RBP27.24■■□□□ 1.95
NUP43-205ENST00000463048 DDB1Q16531 1140 aa27.24■■□□□ 1.95
NUP43-205ENST00000463048 KRT27Q7Z3Y8 459 aa27.24■■□□□ 1.95
NUP43-205ENST00000463048 LRRC37A3O60309 1634 aa27.23■■□□□ 1.95
NUP43-205ENST00000463048 MEGF6O75095 1541 aa27.23■■□□□ 1.95
NUP43-205ENST00000463048 ANP32CO43423 234 aa27.23■■□□□ 1.95
NUP43-205ENST00000463048 PDE3BQ13370 1112 aa27.23■■□□□ 1.95
NUP43-205ENST00000463048 RAPGEF4Q8WZA2 1011 aa27.23■■□□□ 1.95
NUP43-205ENST00000463048 PARP4Q9UKK3 1724 aaKnown RBP27.22■■□□□ 1.95
NUP43-205ENST00000463048 AEBP1Q8IUX7 1158 aa27.22■■□□□ 1.95
NUP43-205ENST00000463048 IGSF1Q8N6C5 1336 aa27.21■■□□□ 1.95
NUP43-205ENST00000463048 HMOX1P09601 288 aa27.21■■□□□ 1.95
NUP43-205ENST00000463048 CDCA7Q9BWT1 371 aaPredicted RBP27.21■■□□□ 1.95
NUP43-205ENST00000463048 EXOC5O00471 708 aa27.2■■□□□ 1.94
NUP43-205ENST00000463048 TATP17735 454 aaPredicted RBP27.2■■□□□ 1.94
NUP43-205ENST00000463048 SULT6B1Q6IMI4 303 aa27.2■■□□□ 1.94
NUP43-205ENST00000463048 RGPD1P0DJD0 1748 aa27.19■■□□□ 1.94
NUP43-205ENST00000463048 DDX54Q8TDD1 881 aaKnown RBP27.16■■□□□ 1.94
NUP43-205ENST00000463048 NCAPD2Q15021 1401 aa27.15■■□□□ 1.94
NUP43-205ENST00000463048 TNS2Q63HR2 1409 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms