RNA–Protein interactions for RNA: ENST00000462976.1

CDK18-206, Transcript of cyclin dependent kinase 18, human

TSL 5

Gene CDK18, Length 794 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-206	ENST00000462976	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.38	■■■□□ 2.93
CDK18-206	ENST00000462976	PDE3B	Q13370	1112 aa		33.37	■■■□□ 2.93
CDK18-206	ENST00000462976	AXIN2	Q9Y2T1	843 aa		33.37	■■■□□ 2.93
CDK18-206	ENST00000462976	PARP4	Q9UKK3	1724 aa	Known RBP	33.36	■■■□□ 2.93
CDK18-206	ENST00000462976	ABCC6	O95255	1503 aa		33.36	■■■□□ 2.93
CDK18-206	ENST00000462976		A0A1W2PP64	1363 aa		33.35	■■■□□ 2.93
CDK18-206	ENST00000462976	WDR17	Q8IZU2	1322 aa		33.35	■■■□□ 2.93
CDK18-206	ENST00000462976	DISP2	A7MBM2	1401 aa		33.35	■■■□□ 2.93
CDK18-206	ENST00000462976	SOX12	O15370	315 aa		33.34	■■■□□ 2.93
CDK18-206	ENST00000462976	TOM1L2	Q6ZVM7	507 aa		33.33	■■■□□ 2.93
CDK18-206	ENST00000462976	NME9	Q86XW9	330 aa		33.33	■■■□□ 2.93
CDK18-206	ENST00000462976	TNS1	Q9HBL0	1735 aa	Known RBP	33.33	■■■□□ 2.93
CDK18-206	ENST00000462976	USP47	Q96K76	1375 aa		33.33	■■■□□ 2.93
CDK18-206	ENST00000462976	PCGF6	Q9BYE7	350 aa		33.29	■■■□□ 2.92
CDK18-206	ENST00000462976	RGPD5	Q99666	1765 aa		33.29	■■■□□ 2.92
CDK18-206	ENST00000462976	C11orf95	C9JLR9	678 aa	Predicted RBP	33.27	■■■□□ 2.92
CDK18-206	ENST00000462976	EN1	Q05925	392 aa	Predicted RBP	33.27	■■■□□ 2.92
CDK18-206	ENST00000462976	TRIM37	O94972	964 aa		33.26	■■■□□ 2.91
CDK18-206	ENST00000462976	TMF1	P82094	1093 aa		33.26	■■■□□ 2.91
CDK18-206	ENST00000462976	CDCA7	Q9BWT1	371 aa	Predicted RBP	33.25	■■■□□ 2.91
CDK18-206	ENST00000462976	OVOS2	A0A0J9YW53	1432 aa		33.25	■■■□□ 2.91
CDK18-206	ENST00000462976	OVOS2	Q6IE36	1432 aa		33.25	■■■□□ 2.91
CDK18-206	ENST00000462976	WNK3	Q9BYP7	1800 aa		33.24	■■■□□ 2.91
CDK18-206	ENST00000462976	CARD10	Q9BWT7	1032 aa		33.24	■■■□□ 2.91
CDK18-206	ENST00000462976	LRRC37A3	O60309	1634 aa		33.24	■■■□□ 2.91
CDK18-206	ENST00000462976	CSB-PGBD3	P0DP91	1061 aa		33.23	■■■□□ 2.91
CDK18-206	ENST00000462976	DDB1	Q16531	1140 aa		33.22	■■■□□ 2.91
CDK18-206	ENST00000462976	LTN1	O94822	1766 aa		33.21	■■■□□ 2.91
CDK18-206	ENST00000462976	ANKRD36B	Q8N2N9	1353 aa		33.21	■■■□□ 2.91
CDK18-206	ENST00000462976	PARD3	Q8TEW0	1356 aa		33.2	■■■□□ 2.9
CDK18-206	ENST00000462976	CCDC7	Q96M83	1385 aa		33.2	■■■□□ 2.9
CDK18-206	ENST00000462976	OVOS2	A0A0G2JMS6	1433 aa		33.19	■■■□□ 2.9
CDK18-206	ENST00000462976	APBA3	O96018	575 aa		33.18	■■■□□ 2.9
CDK18-206	ENST00000462976	CDCA8	Q53HL2	280 aa		33.18	■■■□□ 2.9
CDK18-206	ENST00000462976	CAMKK2	Q96RR4	588 aa		33.18	■■■□□ 2.9
CDK18-206	ENST00000462976	PEAK1	Q9H792	1746 aa		33.18	■■■□□ 2.9
CDK18-206	ENST00000462976	ERBB3	P21860	1342 aa		33.17	■■■□□ 2.9
CDK18-206	ENST00000462976	SRCAP	Q6ZRS2	3230 aa		33.15	■■■□□ 2.9
CDK18-206	ENST00000462976	EZH2	Q15910	746 aa	Known RBP	33.15	■■■□□ 2.9
CDK18-206	ENST00000462976	COG3	Q96JB2	828 aa		33.13	■■■□□ 2.89
CDK18-206	ENST00000462976	BCL9	O00512	1426 aa		33.11	■■■□□ 2.89
CDK18-206	ENST00000462976	SBF2	Q86WG5	1849 aa		33.08	■■■□□ 2.89
CDK18-206	ENST00000462976	MARCH10	Q8NA82	808 aa	Predicted RBP	33.08	■■■□□ 2.89
CDK18-206	ENST00000462976	ANKRD24	Q8TF21	1146 aa		33.08	■■■□□ 2.89
CDK18-206	ENST00000462976	RREB1	Q92766	1687 aa		33.07	■■■□□ 2.89
CDK18-206	ENST00000462976	PSD	A5PKW4	1024 aa	Predicted RBP	33.07	■■■□□ 2.88
CDK18-206	ENST00000462976	EXOC5	O00471	708 aa		33.07	■■■□□ 2.88
CDK18-206	ENST00000462976	IP6K1	Q92551	441 aa		33.07	■■■□□ 2.88
CDK18-206	ENST00000462976	NLRP2	Q9NX02	1062 aa		33.07	■■■□□ 2.88
CDK18-206	ENST00000462976	TNS2	Q63HR2	1409 aa		33.04	■■■□□ 2.88
CDK18-206	ENST00000462976	FYB1	O15117	783 aa		33.03	■■■□□ 2.88
CDK18-206	ENST00000462976	CCER1	Q8TC90	406 aa	Predicted RBP	33.03	■■■□□ 2.88
CDK18-206	ENST00000462976	LRP5	O75197	1615 aa		33.02	■■■□□ 2.88
CDK18-206	ENST00000462976	BCL11B	Q9C0K0	894 aa	Predicted RBP	33.02	■■■□□ 2.88
CDK18-206	ENST00000462976	MAP3K19	Q56UN5	1328 aa		33.02	■■■□□ 2.88
CDK18-206	ENST00000462976	RGPD3	A6NKT7	1758 aa	Predicted RBP	33.01	■■■□□ 2.88
CDK18-206	ENST00000462976	RGPD4	Q7Z3J3	1758 aa		33.01	■■■□□ 2.88
CDK18-206	ENST00000462976	FAM208A	Q9UK61	1670 aa	Known RBP	33.01	■■■□□ 2.88
CDK18-206	ENST00000462976	IL2RB	P14784	551 aa		33	■■■□□ 2.87
CDK18-206	ENST00000462976	R3HDM1	Q15032	1099 aa	Known RBP	33	■■■□□ 2.87
CDK18-206	ENST00000462976	MYOM1	P52179	1685 aa		33	■■■□□ 2.87
CDK18-206	ENST00000462976	NUP188	Q5SRE5	1749 aa		32.99	■■■□□ 2.87
CDK18-206	ENST00000462976	PLSCR1	O15162	318 aa		32.99	■■■□□ 2.87
CDK18-206	ENST00000462976	HOXC9	P31274	260 aa		32.97	■■■□□ 2.87
CDK18-206	ENST00000462976	AMPH	P49418	695 aa		32.97	■■■□□ 2.87
CDK18-206	ENST00000462976	GGNBP2	Q9H3C7	697 aa		32.97	■■■□□ 2.87
CDK18-206	ENST00000462976	RTL1	A6NKG5	1358 aa		32.96	■■■□□ 2.87
CDK18-206	ENST00000462976	KIF20B	Q96Q89	1820 aa		32.95	■■■□□ 2.87
CDK18-206	ENST00000462976	NBPF14	Q5TI25	921 aa		32.95	■■■□□ 2.87
CDK18-206	ENST00000462976	FBLN1	P23142	703 aa		32.94	■■■□□ 2.86
CDK18-206	ENST00000462976	PTF1A	Q7RTS3	328 aa		32.92	■■■□□ 2.86
CDK18-206	ENST00000462976	LTV1	Q96GA3	475 aa	Predicted RBP	32.91	■■■□□ 2.86
CDK18-206	ENST00000462976	CARD14	Q9BXL6	1004 aa		32.91	■■■□□ 2.86
CDK18-206	ENST00000462976	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.9	■■■□□ 2.86
CDK18-206	ENST00000462976	NSD3	Q9BZ95	1437 aa		32.89	■■■□□ 2.86
CDK18-206	ENST00000462976	RRS1	Q15050	365 aa	Known RBP	32.88	■■■□□ 2.85
CDK18-206	ENST00000462976	KIF24	Q5T7B8	1368 aa		32.86	■■■□□ 2.85
CDK18-206	ENST00000462976	NHS	Q6T4R5	1651 aa		32.86	■■■□□ 2.85
CDK18-206	ENST00000462976	HSPA5	P11021	654 aa	Known RBP	32.82	■■■□□ 2.84
CDK18-206	ENST00000462976	SMG6	Q86US8	1419 aa	Known RBP	32.82	■■■□□ 2.84
CDK18-206	ENST00000462976	KCNQ2	O43526	872 aa		32.81	■■■□□ 2.84
CDK18-206	ENST00000462976	PROM2	Q8N271	834 aa		32.81	■■■□□ 2.84
CDK18-206	ENST00000462976	INSR	P06213	1382 aa		32.81	■■■□□ 2.84
CDK18-206	ENST00000462976	FLT4	P35916	1363 aa		32.81	■■■□□ 2.84
CDK18-206	ENST00000462976	RGPD2	P0DJD1	1756 aa		32.81	■■■□□ 2.84
CDK18-206	ENST00000462976	CGNL1	Q0VF96	1302 aa		32.79	■■■□□ 2.84
CDK18-206	ENST00000462976	ACSBG1	Q96GR2	724 aa		32.78	■■■□□ 2.84
CDK18-206	ENST00000462976	TXNRD1	Q16881	649 aa		32.77	■■■□□ 2.84
CDK18-206	ENST00000462976	NBPF6	Q5VWK0	638 aa		32.77	■■■□□ 2.84
CDK18-206	ENST00000462976	NBPF4	Q96M43	638 aa		32.77	■■■□□ 2.84
CDK18-206	ENST00000462976	HSP90AB2P	Q58FF8	381 aa		32.76	■■■□□ 2.83
CDK18-206	ENST00000462976	POLR3GL	Q9BT43	218 aa		32.76	■■■□□ 2.83
CDK18-206	ENST00000462976	DDX54	Q8TDD1	881 aa	Known RBP	32.75	■■■□□ 2.83
CDK18-206	ENST00000462976	MEGF6	O75095	1541 aa		32.74	■■■□□ 2.83
CDK18-206	ENST00000462976	ZCRB1	Q8TBF4	217 aa	Known RBP	32.73	■■■□□ 2.83
CDK18-206	ENST00000462976	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.73	■■■□□ 2.83
CDK18-206	ENST00000462976	BTAF1	O14981	1849 aa		32.72	■■■□□ 2.83
CDK18-206	ENST00000462976	EMILIN1	Q9Y6C2	1016 aa		32.71	■■■□□ 2.83
CDK18-206	ENST00000462976	ANKRD26	Q9UPS8	1709 aa		32.71	■■■□□ 2.83
CDK18-206	ENST00000462976	SHANK3	Q9BYB0	1731 aa		32.7	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 66 ms