RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 ATF5Q9Y2D1 282 aaPredicted RBP16.94■□□□□ 0.3
PCCB-203ENST00000462542 CASZ1Q86V15 1759 aa16.94■□□□□ 0.3
PCCB-203ENST00000462542 WDR17Q8IZU2 1322 aa16.94■□□□□ 0.3
PCCB-203ENST00000462542 SLC15A2Q16348 729 aa16.93■□□□□ 0.3
PCCB-203ENST00000462542 TXNRD1Q16881 649 aa16.93■□□□□ 0.3
PCCB-203ENST00000462542 PTF1AQ7RTS3 328 aa16.93■□□□□ 0.3
PCCB-203ENST00000462542 SYT17Q9BSW7 474 aa16.93■□□□□ 0.3
PCCB-203ENST00000462542 CABP1Q9NZU7 370 aa16.93■□□□□ 0.3
PCCB-203ENST00000462542 UTRNP46939 3433 aa16.93■□□□□ 0.3
PCCB-203ENST00000462542 EXOC5O00471 708 aa16.92■□□□□ 0.3
PCCB-203ENST00000462542 CARD10Q9BWT7 1032 aa16.92■□□□□ 0.3
PCCB-203ENST00000462542 MTFR1LQ9H019 292 aa16.92■□□□□ 0.3
PCCB-203ENST00000462542 CABP2Q9NPB3 220 aa16.92■□□□□ 0.3
PCCB-203ENST00000462542 AXIN2Q9Y2T1 843 aa16.92■□□□□ 0.3
PCCB-203ENST00000462542 CENPJQ9HC77 1338 aaPredicted RBP16.92■□□□□ 0.3
PCCB-203ENST00000462542 KIAA1210Q9ULL0 1709 aa16.91■□□□□ 0.3
PCCB-203ENST00000462542 KCNH5Q8NCM2 988 aa16.91■□□□□ 0.3
PCCB-203ENST00000462542 FHDC1Q9C0D6 1143 aaPredicted RBP16.91■□□□□ 0.3
PCCB-203ENST00000462542 NBPF1Q3BBV0 1214 aa16.9■□□□□ 0.3
PCCB-203ENST00000462542 LRRC37A3O60309 1634 aa16.89■□□□□ 0.29
PCCB-203ENST00000462542 USP6P35125 1406 aa16.89■□□□□ 0.29
PCCB-203ENST00000462542 ARHGEF25Q86VW2 580 aa16.89■□□□□ 0.29
PCCB-203ENST00000462542 ZNF692Q9BU19 519 aaPredicted RBP16.89■□□□□ 0.29
PCCB-203ENST00000462542 SLIT3O75094 1523 aa16.89■□□□□ 0.29
PCCB-203ENST00000462542 COL18A1P39060 1754 aa16.87■□□□□ 0.29
PCCB-203ENST00000462542 CSB-PGBD3P0DP91 1061 aa16.87■□□□□ 0.29
PCCB-203ENST00000462542 C1QTNF8P60827 252 aa16.87■□□□□ 0.29
PCCB-203ENST00000462542 SGIP1Q9BQI5 828 aa16.87■□□□□ 0.29
PCCB-203ENST00000462542 MYOM1P52179 1685 aa16.86■□□□□ 0.29
PCCB-203ENST00000462542 ARXQ96QS3 562 aa16.86■□□□□ 0.29
PCCB-203ENST00000462542 CHD4Q14839 1912 aa16.86■□□□□ 0.29
PCCB-203ENST00000462542 AKAP12Q02952 1782 aa16.84■□□□□ 0.29
PCCB-203ENST00000462542 SENP3-EIF4A1A0A087X0R7 540 aa16.84■□□□□ 0.29
PCCB-203ENST00000462542 CCDC7Q96M83 1385 aa16.84■□□□□ 0.29
PCCB-203ENST00000462542 CPSF1Q10570 1443 aaKnown RBP16.84■□□□□ 0.29
PCCB-203ENST00000462542 TTC21BQ7Z4L5 1316 aa16.83■□□□□ 0.28
PCCB-203ENST00000462542 EVC2Q86UK5 1308 aa16.83■□□□□ 0.28
PCCB-203ENST00000462542 MAP3K5Q99683 1374 aa16.83■□□□□ 0.28
PCCB-203ENST00000462542 TTC21AQ8NDW8 1320 aa16.82■□□□□ 0.28
PCCB-203ENST00000462542 WNK3Q9BYP7 1800 aa16.82■□□□□ 0.28
PCCB-203ENST00000462542 GPR162Q16538 588 aa16.8■□□□□ 0.28
PCCB-203ENST00000462542 PIK3C2AO00443 1686 aa16.79■□□□□ 0.28
PCCB-203ENST00000462542 SLC16A10Q8TF71 515 aa16.79■□□□□ 0.28
PCCB-203ENST00000462542 SOX12O15370 315 aa16.78■□□□□ 0.28
PCCB-203ENST00000462542 RGPD5Q99666 1765 aa16.78■□□□□ 0.28
PCCB-203ENST00000462542 ACSBG1Q96GR2 724 aa16.77■□□□□ 0.28
PCCB-203ENST00000462542 QRICH2Q9H0J4 1663 aa16.77■□□□□ 0.28
PCCB-203ENST00000462542 TNS2Q63HR2 1409 aa16.77■□□□□ 0.27
PCCB-203ENST00000462542 IL2RBP14784 551 aa16.76■□□□□ 0.27
PCCB-203ENST00000462542 ABCC6O95255 1503 aa16.75■□□□□ 0.27
PCCB-203ENST00000462542 TRPM1Q7Z4N2 1603 aa16.75■□□□□ 0.27
PCCB-203ENST00000462542 GIGYF1O75420 1035 aaPredicted RBP16.75■□□□□ 0.27
PCCB-203ENST00000462542 POLD1P28340 1107 aa16.75■□□□□ 0.27
PCCB-203ENST00000462542 NLRP2Q9NX02 1062 aa16.75■□□□□ 0.27
PCCB-203ENST00000462542 NHSQ6T4R5 1651 aa16.75■□□□□ 0.27
PCCB-203ENST00000462542 SLC27A3Q5K4L6 730 aa16.74■□□□□ 0.27
PCCB-203ENST00000462542 IFFO2Q5TF58 517 aa16.74■□□□□ 0.27
PCCB-203ENST00000462542 KTN1Q86UP2 1357 aaKnown RBP16.74■□□□□ 0.27
PCCB-203ENST00000462542 LRRC4BQ9NT99 713 aa16.73■□□□□ 0.27
PCCB-203ENST00000462542 NFAT5O94916 1531 aa16.72■□□□□ 0.27
PCCB-203ENST00000462542 ZNF827Q17R98 1081 aa16.72■□□□□ 0.27
PCCB-203ENST00000462542 AKT1S1Q96B36 256 aa16.72■□□□□ 0.27
PCCB-203ENST00000462542 ERBB3P21860 1342 aa16.71■□□□□ 0.27
PCCB-203ENST00000462542 KAT6BQ8WYB5 2073 aa16.71■□□□□ 0.27
PCCB-203ENST00000462542 USP31Q70CQ4 1352 aa16.71■□□□□ 0.27
PCCB-203ENST00000462542 PAPPAQ13219 1627 aa16.7■□□□□ 0.26
PCCB-203ENST00000462542 GOLGB1Q14789 3259 aaKnown RBP16.7■□□□□ 0.26
PCCB-203ENST00000462542 GRIN3BO60391 1043 aa16.69■□□□□ 0.26
PCCB-203ENST00000462542 L3MBTL2Q969R5 705 aa16.69■□□□□ 0.26
PCCB-203ENST00000462542 TFCP2L1Q9NZI6 479 aa16.69■□□□□ 0.26
PCCB-203ENST00000462542 BTAF1O14981 1849 aa16.68■□□□□ 0.26
PCCB-203ENST00000462542 PELP1Q8IZL8 1130 aaKnown RBP16.68■□□□□ 0.26
PCCB-203ENST00000462542 KLHL34Q8N239 644 aa16.68■□□□□ 0.26
PCCB-203ENST00000462542 ANKRD24Q8TF21 1146 aa16.68■□□□□ 0.26
PCCB-203ENST00000462542 CEP350Q5VT06 3117 aa16.68■□□□□ 0.26
PCCB-203ENST00000462542 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.67■□□□□ 0.26
PCCB-203ENST00000462542 DDX54Q8TDD1 881 aaKnown RBP16.66■□□□□ 0.26
PCCB-203ENST00000462542 PNPLA7Q6ZV29 1317 aa16.66■□□□□ 0.26
PCCB-203ENST00000462542 QSER1Q2KHR3 1735 aa16.65■□□□□ 0.26
PCCB-203ENST00000462542 HMGB2P26583 209 aaKnown RBP16.64■□□□□ 0.25
PCCB-203ENST00000462542 NME9Q86XW9 330 aa16.64■□□□□ 0.25
PCCB-203ENST00000462542 COL24A1Q17RW2 1714 aa16.64■□□□□ 0.25
PCCB-203ENST00000462542 ROCK2O75116 1388 aaKnown RBP16.64■□□□□ 0.25
PCCB-203ENST00000462542 HDGFL2Q7Z4V5 671 aaPredicted RBP16.63■□□□□ 0.25
PCCB-203ENST00000462542 IP6K1Q92551 441 aa16.63■□□□□ 0.25
PCCB-203ENST00000462542 PRIM1P49642 420 aaKnown RBP16.62■□□□□ 0.25
PCCB-203ENST00000462542 NLGN2Q8NFZ4 835 aa16.62■□□□□ 0.25
PCCB-203ENST00000462542 SYTL4Q96C24 671 aaPredicted RBP16.61■□□□□ 0.25
PCCB-203ENST00000462542 USP54Q70EL1 1684 aa16.61■□□□□ 0.25
PCCB-203ENST00000462542 MON2Q7Z3U7 1717 aa16.61■□□□□ 0.25
PCCB-203ENST00000462542 LTN1O94822 1766 aa16.6■□□□□ 0.25
PCCB-203ENST00000462542 TMC1Q8TDI8 760 aa16.6■□□□□ 0.25
PCCB-203ENST00000462542 TERF2IPQ9NYB0 399 aa16.6■□□□□ 0.25
PCCB-203ENST00000462542 ANKRD36BQ8N2N9 1353 aa16.6■□□□□ 0.25
PCCB-203ENST00000462542 SBNO2Q9Y2G9 1366 aa16.6■□□□□ 0.25
PCCB-203ENST00000462542 YBX3P16989 372 aaKnown RBP eCLIP16.59■□□□□ 0.25
PCCB-203ENST00000462542 MSH5O43196 834 aa16.58■□□□□ 0.24
PCCB-203ENST00000462542 KCNQ4P56696 695 aa16.58■□□□□ 0.24
PCCB-203ENST00000462542 ZCRB1Q8TBF4 217 aaKnown RBP16.58■□□□□ 0.24
PCCB-203ENST00000462542 SLC12A5Q9H2X9 1139 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms