RNA–Protein interactions for RNA: ENST00000462391.5

NPM3-202, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 3

Gene NPM3, Length 481 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-202ENST00000462391 ABCC6O95255 1503 aa29.79■■■□□ 2.36
NPM3-202ENST00000462391 SF3B2Q13435 895 aaKnown RBP29.78■■■□□ 2.36
NPM3-202ENST00000462391 NME9Q86XW9 330 aa29.78■■■□□ 2.36
NPM3-202ENST00000462391 SOX12O15370 315 aa29.76■■■□□ 2.35
NPM3-202ENST00000462391 ZRANB1Q9UGI0 708 aa29.74■■■□□ 2.35
NPM3-202ENST00000462391 ANKRD36BQ8N2N9 1353 aa29.74■■■□□ 2.35
NPM3-202ENST00000462391 WDR17Q8IZU2 1322 aa29.73■■■□□ 2.35
NPM3-202ENST00000462391 AXIN2Q9Y2T1 843 aa29.73■■■□□ 2.35
NPM3-202ENST00000462391 OVOS2A0A0J9YW53 1432 aa29.71■■■□□ 2.35
NPM3-202ENST00000462391 OVOS2Q6IE36 1432 aa29.71■■■□□ 2.35
NPM3-202ENST00000462391 TOM1L2Q6ZVM7 507 aa29.71■■■□□ 2.35
NPM3-202ENST00000462391 PARP4Q9UKK3 1724 aaKnown RBP29.7■■■□□ 2.34
NPM3-202ENST00000462391 RGPD1P0DJD0 1748 aa29.69■■■□□ 2.34
NPM3-202ENST00000462391 PDE3BQ13370 1112 aa29.69■■■□□ 2.34
NPM3-202ENST00000462391 RGPD5Q99666 1765 aa29.69■■■□□ 2.34
NPM3-202ENST00000462391 FAM196AQ6ZSG2 479 aa29.68■■■□□ 2.34
NPM3-202ENST00000462391 FAM182BQ5T319 152 aa29.66■■■□□ 2.34
NPM3-202ENST00000462391 LTN1O94822 1766 aa29.66■■■□□ 2.34
NPM3-202ENST00000462391 BAG6P46379 1132 aa29.65■■■□□ 2.34
NPM3-202ENST00000462391 DEFB132Q7Z7B7 95 aa29.65■■■□□ 2.34
NPM3-202ENST00000462391 CSB-PGBD3P0DP91 1061 aa29.64■■■□□ 2.34
NPM3-202ENST00000462391 COG3Q96JB2 828 aa29.64■■■□□ 2.34
NPM3-202ENST00000462391 CDCA7Q9BWT1 371 aaPredicted RBP29.64■■■□□ 2.34
NPM3-202ENST00000462391 CARD10Q9BWT7 1032 aa29.64■■■□□ 2.34
NPM3-202ENST00000462391 WNK3Q9BYP7 1800 aa29.62■■■□□ 2.33
NPM3-202ENST00000462391 C11orf95C9JLR9 678 aaPredicted RBP29.62■■■□□ 2.33
NPM3-202ENST00000462391 CCDC7Q96M83 1385 aa29.61■■■□□ 2.33
NPM3-202ENST00000462391 DISP2A7MBM2 1401 aa29.6■■■□□ 2.33
NPM3-202ENST00000462391 ERBB3P21860 1342 aa29.59■■■□□ 2.33
NPM3-202ENST00000462391 LRRC37A3O60309 1634 aa29.59■■■□□ 2.33
NPM3-202ENST00000462391 TNS1Q9HBL0 1735 aaKnown RBP29.59■■■□□ 2.33
NPM3-202ENST00000462391 MYOM1P52179 1685 aa29.58■■■□□ 2.33
NPM3-202ENST00000462391 EIF4G2P78344 907 aaKnown RBP eCLIP29.58■■■□□ 2.33
NPM3-202ENST00000462391 DDB1Q16531 1140 aa29.58■■■□□ 2.33
NPM3-202ENST00000462391 TRIM37O94972 964 aa29.55■■■□□ 2.32
NPM3-202ENST00000462391 OVOS2A0A0G2JMS6 1433 aa29.54■■■□□ 2.32
NPM3-202ENST00000462391 FYB1O15117 783 aa29.54■■■□□ 2.32
NPM3-202ENST00000462391 IP6K1Q92551 441 aa29.54■■■□□ 2.32
NPM3-202ENST00000462391 ANKRD24Q8TF21 1146 aa29.52■■■□□ 2.32
NPM3-202ENST00000462391 KIF20BQ96Q89 1820 aa29.52■■■□□ 2.32
NPM3-202ENST00000462391 PEAK1Q9H792 1746 aa29.51■■■□□ 2.32
NPM3-202ENST00000462391 NLRP2Q9NX02 1062 aa29.51■■■□□ 2.31
NPM3-202ENST00000462391 EN1Q05925 392 aaPredicted RBP29.5■■■□□ 2.31
NPM3-202ENST00000462391 PARD3Q8TEW0 1356 aa29.5■■■□□ 2.31
NPM3-202ENST00000462391 FAM208AQ9UK61 1670 aaKnown RBP29.5■■■□□ 2.31
NPM3-202ENST00000462391 MAP3K19Q56UN5 1328 aa29.49■■■□□ 2.31
NPM3-202ENST00000462391 HSPA5P11021 654 aaKnown RBP29.49■■■□□ 2.31
NPM3-202ENST00000462391 GGNBP2Q9H3C7 697 aa29.49■■■□□ 2.31
NPM3-202ENST00000462391 RTL1A6NKG5 1358 aa29.48■■■□□ 2.31
NPM3-202ENST00000462391 CARD14Q9BXL6 1004 aa29.47■■■□□ 2.31
NPM3-202ENST00000462391 BCL9O00512 1426 aa29.46■■■□□ 2.31
NPM3-202ENST00000462391 NSD3Q9BZ95 1437 aa29.46■■■□□ 2.31
NPM3-202ENST00000462391 EXOC5O00471 708 aa29.46■■■□□ 2.31
NPM3-202ENST00000462391 APBA3O96018 575 aa29.46■■■□□ 2.31
NPM3-202ENST00000462391 AMPHP49418 695 aa29.46■■■□□ 2.31
NPM3-202ENST00000462391 TNS2Q63HR2 1409 aa29.45■■■□□ 2.31
NPM3-202ENST00000462391 HOXC9P31274 260 aa29.44■■■□□ 2.3
NPM3-202ENST00000462391 IL2RBP14784 551 aa29.43■■■□□ 2.3
NPM3-202ENST00000462391 MARCH10Q8NA82 808 aaPredicted RBP29.43■■■□□ 2.3
NPM3-202ENST00000462391 CAMKK2Q96RR4 588 aa29.43■■■□□ 2.3
NPM3-202ENST00000462391 SBF2Q86WG5 1849 aa29.43■■■□□ 2.3
NPM3-202ENST00000462391 FBLN1P23142 703 aa29.41■■■□□ 2.3
NPM3-202ENST00000462391 POLR3GLQ9BT43 218 aa29.41■■■□□ 2.3
NPM3-202ENST00000462391 CGNL1Q0VF96 1302 aa29.41■■■□□ 2.3
NPM3-202ENST00000462391 KIF24Q5T7B8 1368 aa29.4■■■□□ 2.3
NPM3-202ENST00000462391 EZH2Q15910 746 aaKnown RBP29.4■■■□□ 2.3
NPM3-202ENST00000462391 LTV1Q96GA3 475 aaPredicted RBP29.39■■■□□ 2.3
NPM3-202ENST00000462391 RRS1Q15050 365 aaKnown RBP29.38■■■□□ 2.29
NPM3-202ENST00000462391 BCL11BQ9C0K0 894 aaPredicted RBP29.37■■■□□ 2.29
NPM3-202ENST00000462391 RREB1Q92766 1687 aa29.36■■■□□ 2.29
NPM3-202ENST00000462391 RGPD3A6NKT7 1758 aaPredicted RBP29.36■■■□□ 2.29
NPM3-202ENST00000462391 RGPD4Q7Z3J3 1758 aa29.36■■■□□ 2.29
NPM3-202ENST00000462391 SMG6Q86US8 1419 aaKnown RBP29.36■■■□□ 2.29
NPM3-202ENST00000462391 SRCAPQ6ZRS2 3230 aa29.35■■■□□ 2.29
NPM3-202ENST00000462391 FLT4P35916 1363 aa29.34■■■□□ 2.29
NPM3-202ENST00000462391 INSRP06213 1382 aa29.33■■■□□ 2.29
NPM3-202ENST00000462391 PLSCR1O15162 318 aa29.31■■■□□ 2.28
NPM3-202ENST00000462391 NUP188Q5SRE5 1749 aa29.29■■■□□ 2.28
NPM3-202ENST00000462391 RGPD2P0DJD1 1756 aa29.29■■■□□ 2.28
NPM3-202ENST00000462391 ANKRD26Q9UPS8 1709 aa29.28■■■□□ 2.28
NPM3-202ENST00000462391 PSDA5PKW4 1024 aaPredicted RBP29.28■■■□□ 2.28
NPM3-202ENST00000462391 PANK3Q9H999 370 aa29.28■■■□□ 2.28
NPM3-202ENST00000462391 HSP90AB2PQ58FF8 381 aa29.27■■■□□ 2.28
NPM3-202ENST00000462391 NHSQ6T4R5 1651 aa29.26■■■□□ 2.27
NPM3-202ENST00000462391 R3HDM1Q15032 1099 aaKnown RBP29.25■■■□□ 2.27
NPM3-202ENST00000462391 NBPF14Q5TI25 921 aa29.25■■■□□ 2.27
NPM3-202ENST00000462391 NSD2O96028 1365 aa29.25■■■□□ 2.27
NPM3-202ENST00000462391 NBPF6Q5VWK0 638 aa29.24■■■□□ 2.27
NPM3-202ENST00000462391 PTF1AQ7RTS3 328 aa29.24■■■□□ 2.27
NPM3-202ENST00000462391 NBPF4Q96M43 638 aa29.24■■■□□ 2.27
NPM3-202ENST00000462391 EMILIN1Q9Y6C2 1016 aa29.24■■■□□ 2.27
NPM3-202ENST00000462391 LRP5O75197 1615 aa29.22■■■□□ 2.27
NPM3-202ENST00000462391 MAP2P11137 1827 aaKnown RBP29.22■■■□□ 2.27
NPM3-202ENST00000462391 MEGF6O75095 1541 aa29.21■■■□□ 2.27
NPM3-202ENST00000462391 WASHC2AQ641Q2 1341 aa29.2■■■□□ 2.27
NPM3-202ENST00000462391 ZCRB1Q8TBF4 217 aaKnown RBP29.2■■■□□ 2.26
NPM3-202ENST00000462391 RAPGEF4Q8WZA2 1011 aa29.2■■■□□ 2.26
NPM3-202ENST00000462391 PPM1GO15355 546 aaPredicted RBP29.19■■■□□ 2.26
NPM3-202ENST00000462391 KCNQ2O43526 872 aa29.19■■■□□ 2.26
NPM3-202ENST00000462391 DDX54Q8TDD1 881 aaKnown RBP29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 305.5 ms