RNA–Protein interactions for RNA: ENST00000462309.1

COL4A2-203, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-203ENST00000462309 TRAF7Q6Q0C0 670 aa13.37□□□□□ -0.27
COL4A2-203ENST00000462309 DZIP3Q86Y13 1208 aaKnown RBP13.37□□□□□ -0.27
COL4A2-203ENST00000462309 BPHLQ86WA6 291 aaPredicted RBP13.36□□□□□ -0.27
COL4A2-203ENST00000462309 NOVA2Q9UNW9 492 aaKnown RBP13.36□□□□□ -0.27
COL4A2-203ENST00000462309 FCF1Q9Y324 198 aaKnown RBP13.36□□□□□ -0.27
COL4A2-203ENST00000462309 TSGA10IPQ3SY00 556 aa13.35□□□□□ -0.27
COL4A2-203ENST00000462309 CRTC2Q53ET0 693 aaPredicted RBP13.35□□□□□ -0.27
COL4A2-203ENST00000462309 C4orf48Q5BLP8 95 aa13.35□□□□□ -0.27
COL4A2-203ENST00000462309 TMEM164Q5U3C3 297 aa13.35□□□□□ -0.27
COL4A2-203ENST00000462309 ZNF511Q8NB15 262 aa13.35□□□□□ -0.27
COL4A2-203ENST00000462309 FOXJ1Q92949 421 aa13.35□□□□□ -0.27
COL4A2-203ENST00000462309 ATP5J2-PTCD1G3V325 749 aa13.34□□□□□ -0.27
COL4A2-203ENST00000462309 PTK7Q13308 1070 aa13.34□□□□□ -0.27
COL4A2-203ENST00000462309 ERFEQ4G0M1 354 aa13.34□□□□□ -0.27
COL4A2-203ENST00000462309 STK32AQ8WU08 396 aa13.34□□□□□ -0.27
COL4A2-203ENST00000462309 CARD14Q9BXL6 1004 aa13.34□□□□□ -0.27
COL4A2-203ENST00000462309 MAGEB6P1A0A0J9YX57 407 aa13.33□□□□□ -0.28
COL4A2-203ENST00000462309 USP17L15C9J2P7 530 aa13.33□□□□□ -0.28
COL4A2-203ENST00000462309 USP17L10C9JJH3 530 aa13.33□□□□□ -0.28
COL4A2-203ENST00000462309 USP17L13C9JLJ4 530 aa13.33□□□□□ -0.28
COL4A2-203ENST00000462309 USP17L12C9JPN9 530 aa13.33□□□□□ -0.28
COL4A2-203ENST00000462309 USP17L11C9JVI0 530 aa13.33□□□□□ -0.28
COL4A2-203ENST00000462309 USP17L21D6R901 530 aa13.33□□□□□ -0.28
COL4A2-203ENST00000462309 USP17L18D6R9N7 530 aa13.33□□□□□ -0.28
COL4A2-203ENST00000462309 USP17L22D6RA61 530 aa13.33□□□□□ -0.28
COL4A2-203ENST00000462309 USP17L17D6RBQ6 530 aa13.33□□□□□ -0.28
COL4A2-203ENST00000462309 USP17L19D6RCP7 530 aa13.33□□□□□ -0.28
COL4A2-203ENST00000462309 USP17L20D6RJB6 530 aa13.33□□□□□ -0.28
COL4A2-203ENST00000462309 USP17L24Q0WX57 530 aa13.33□□□□□ -0.28
COL4A2-203ENST00000462309 LINC01559Q495D7 138 aa13.32□□□□□ -0.28
COL4A2-203ENST00000462309 GIGYF1O75420 1035 aaPredicted RBP13.31□□□□□ -0.28
COL4A2-203ENST00000462309 RASA1P20936 1047 aa13.31□□□□□ -0.28
COL4A2-203ENST00000462309 EML3Q32P44 896 aa13.31□□□□□ -0.28
COL4A2-203ENST00000462309 LARP1Q6PKG0 1096 aaKnown RBP13.31□□□□□ -0.28
COL4A2-203ENST00000462309 CCDC85AQ96PX6 553 aaPredicted RBP13.31□□□□□ -0.28
COL4A2-203ENST00000462309 C1QTNF2Q9BXJ5 285 aa13.31□□□□□ -0.28
COL4A2-203ENST00000462309 HCSTQ9UBK5 93 aa13.31□□□□□ -0.28
COL4A2-203ENST00000462309 TMCO4Q5TGY1 634 aa13.3□□□□□ -0.28
COL4A2-203ENST00000462309 SH3BP2P78314 561 aa13.29□□□□□ -0.28
COL4A2-203ENST00000462309 AGERQ15109 404 aa13.29□□□□□ -0.28
COL4A2-203ENST00000462309 CDCA7Q9BWT1 371 aaPredicted RBP13.29□□□□□ -0.28
COL4A2-203ENST00000462309 ESPNB1AK53 854 aa13.27□□□□□ -0.29
COL4A2-203ENST00000462309 FAM69CQ0P6D2 419 aa13.27□□□□□ -0.29
COL4A2-203ENST00000462309 RNF20Q5VTR2 975 aa13.27□□□□□ -0.29
COL4A2-203ENST00000462309 ANKMY2Q8IV38 441 aa13.27□□□□□ -0.29
COL4A2-203ENST00000462309 TRMT44Q8IYL2 757 aaKnown RBP13.27□□□□□ -0.29
COL4A2-203ENST00000462309 DOLKQ9UPQ8 538 aa13.27□□□□□ -0.29
COL4A2-203ENST00000462309 NOD1Q9Y239 953 aa13.27□□□□□ -0.29
COL4A2-203ENST00000462309 CLDN10P78369 228 aa13.26□□□□□ -0.29
COL4A2-203ENST00000462309 B4GALNT3Q6L9W6 998 aa13.26□□□□□ -0.29
COL4A2-203ENST00000462309 TRIM50Q86XT4 487 aa13.26□□□□□ -0.29
COL4A2-203ENST00000462309 OGFOD1Q8N543 542 aa13.26□□□□□ -0.29
COL4A2-203ENST00000462309 FAM200AQ8TCP9 573 aa13.26□□□□□ -0.29
COL4A2-203ENST00000462309 IVNS1ABPQ9Y6Y0 642 aa13.26□□□□□ -0.29
COL4A2-203ENST00000462309 PPEF1O14829 653 aaPredicted RBP13.25□□□□□ -0.29
COL4A2-203ENST00000462309 ZBTB7BO15156 539 aaPredicted RBP13.25□□□□□ -0.29
COL4A2-203ENST00000462309 GNEQ9Y223 722 aaKnown RBP13.25□□□□□ -0.29
COL4A2-203ENST00000462309 DKK1O94907 266 aa13.24□□□□□ -0.29
COL4A2-203ENST00000462309 ITGBL1O95965 494 aaPredicted RBP13.24□□□□□ -0.29
COL4A2-203ENST00000462309 KCNC4Q03721 635 aa13.24□□□□□ -0.29
COL4A2-203ENST00000462309 PHLDB3Q6NSJ2 640 aa13.24□□□□□ -0.29
COL4A2-203ENST00000462309 LARGE2Q8N3Y3 721 aa13.24□□□□□ -0.29
COL4A2-203ENST00000462309 SLC10A4Q96EP9 437 aa13.24□□□□□ -0.29
COL4A2-203ENST00000462309 SLAIN2Q9P270 581 aa13.24□□□□□ -0.29
COL4A2-203ENST00000462309 ATP1A2P50993 1020 aa13.23□□□□□ -0.29
COL4A2-203ENST00000462309 MFAP1P55081 439 aaKnown RBP13.23□□□□□ -0.29
COL4A2-203ENST00000462309 CLP1Q92989 425 aaKnown RBP13.23□□□□□ -0.29
COL4A2-203ENST00000462309 DNAAF2Q9NVR5 837 aaKnown RBP13.23□□□□□ -0.29
COL4A2-203ENST00000462309 CDV3Q9UKY7 258 aaKnown RBP13.23□□□□□ -0.29
COL4A2-203ENST00000462309 RNF223E7ERA6 249 aa13.22□□□□□ -0.29
COL4A2-203ENST00000462309 DPYDQ12882 1025 aa13.22□□□□□ -0.29
COL4A2-203ENST00000462309 NBPF20Q3BBV1 942 aa13.22□□□□□ -0.29
COL4A2-203ENST00000462309 NPM2Q86SE8 214 aaKnown RBP13.22□□□□□ -0.29
COL4A2-203ENST00000462309 CCDC125Q86Z20 511 aa13.22□□□□□ -0.29
COL4A2-203ENST00000462309 SEPT12Q8IYM1 358 aa13.22□□□□□ -0.29
COL4A2-203ENST00000462309 RGS22Q8NE09 1264 aa13.22□□□□□ -0.29
COL4A2-203ENST00000462309 SSFA2P28290 1259 aa13.21□□□□□ -0.29
COL4A2-203ENST00000462309 ANKLE1Q8NAG6 615 aa13.21□□□□□ -0.29
COL4A2-203ENST00000462309 ZBTB24O43167 697 aaPredicted RBP13.2□□□□□ -0.3
COL4A2-203ENST00000462309 OXLD1Q5BKU9 147 aa13.2□□□□□ -0.3
COL4A2-203ENST00000462309 TXNDC2Q86VQ3 553 aa13.2□□□□□ -0.3
COL4A2-203ENST00000462309 SIX5Q8N196 739 aa13.2□□□□□ -0.3
COL4A2-203ENST00000462309 GTF2IP78347 998 aa13.19□□□□□ -0.3
COL4A2-203ENST00000462309 PLA2G2CQ5R387 149 aa13.19□□□□□ -0.3
COL4A2-203ENST00000462309 KIAA1024Q9UPX6 916 aa13.19□□□□□ -0.3
COL4A2-203ENST00000462309 PCDHGA11Q9Y5H2 935 aa13.19□□□□□ -0.3
COL4A2-203ENST00000462309 SKOR1P84550 965 aa13.18□□□□□ -0.3
COL4A2-203ENST00000462309 TRIM32Q13049 653 aa13.18□□□□□ -0.3
COL4A2-203ENST00000462309 SWI5Q1ZZU3 235 aa13.18□□□□□ -0.3
COL4A2-203ENST00000462309 ZNF594Q96JF6 807 aaPredicted RBP13.18□□□□□ -0.3
COL4A2-203ENST00000462309 VARSP26640 1264 aaKnown RBP13.17□□□□□ -0.3
COL4A2-203ENST00000462309 WNT7BP56706 349 aa13.17□□□□□ -0.3
COL4A2-203ENST00000462309 USP4Q13107 963 aa13.17□□□□□ -0.3
COL4A2-203ENST00000462309 SIRT1Q96EB6 747 aa13.17□□□□□ -0.3
COL4A2-203ENST00000462309 SND1Q7KZF4 910 aaKnown RBP eCLIP13.16□□□□□ -0.3
COL4A2-203ENST00000462309 PCDHB11Q9Y5F2 797 aa13.16□□□□□ -0.3
COL4A2-203ENST00000462309 GGCXP38435 758 aa13.15□□□□□ -0.3
COL4A2-203ENST00000462309 KCTD15Q96SI1 283 aaPredicted RBP13.15□□□□□ -0.3
COL4A2-203ENST00000462309 MAP4K5Q9Y4K4 846 aa13.15□□□□□ -0.3
COL4A2-203ENST00000462309 RPIAP49247 311 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms