RNA–Protein interactions for RNA: ENST00000462247.1

ERCC6-204, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 3

Gene ERCC6, Length 660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-204ENST00000462247 ATP10DQ9P241 1426 aa17.21■□□□□ 0.35
ERCC6-204ENST00000462247 NGDNQ8NEJ9 315 aaKnown RBP17.2■□□□□ 0.34
ERCC6-204ENST00000462247 PRAM1Q96QH2 718 aa17.2■□□□□ 0.34
ERCC6-204ENST00000462247 TRAK1Q9UPV9 953 aa17.2■□□□□ 0.34
ERCC6-204ENST00000462247 PHRF1Q9P1Y6 1649 aaKnown RBP17.19■□□□□ 0.34
ERCC6-204ENST00000462247 GRIN3BO60391 1043 aa17.19■□□□□ 0.34
ERCC6-204ENST00000462247 ATP7BP35670 1465 aa17.18■□□□□ 0.34
ERCC6-204ENST00000462247 QRICH2Q9H0J4 1663 aa17.17■□□□□ 0.34
ERCC6-204ENST00000462247 DDB1Q16531 1140 aa17.17■□□□□ 0.34
ERCC6-204ENST00000462247 COL13A1Q5TAT6 717 aaPredicted RBP17.16■□□□□ 0.34
ERCC6-204ENST00000462247 POGKQ9P215 609 aa17.16■□□□□ 0.34
ERCC6-204ENST00000462247 PRELPP51888 382 aa17.15■□□□□ 0.34
ERCC6-204ENST00000462247 NUTM2GQ5VZR2 741 aa17.15■□□□□ 0.34
ERCC6-204ENST00000462247 CARD11Q9BXL7 1154 aa17.15■□□□□ 0.34
ERCC6-204ENST00000462247 ZNF526Q8TF50 670 aaPredicted RBP17.14■□□□□ 0.33
ERCC6-204ENST00000462247 PRR36Q9H6K5 1346 aa17.14■□□□□ 0.33
ERCC6-204ENST00000462247 EIF3AQ14152 1382 aaKnown RBP17.14■□□□□ 0.33
ERCC6-204ENST00000462247 YBX3P16989 372 aaKnown RBP eCLIP17.13■□□□□ 0.33
ERCC6-204ENST00000462247 POLD1P28340 1107 aa17.13■□□□□ 0.33
ERCC6-204ENST00000462247 APLP1P51693 650 aa17.13■□□□□ 0.33
ERCC6-204ENST00000462247 HIRIP3Q9BW71 556 aaPredicted RBP17.13■□□□□ 0.33
ERCC6-204ENST00000462247 LRRC37A3O60309 1634 aa17.12■□□□□ 0.33
ERCC6-204ENST00000462247 SLC34A2O95436 690 aa17.12■□□□□ 0.33
ERCC6-204ENST00000462247 NLGN2Q8NFZ4 835 aa17.12■□□□□ 0.33
ERCC6-204ENST00000462247 LMO7Q8WWI1 1683 aa17.12■□□□□ 0.33
ERCC6-204ENST00000462247 TNS4Q8IZW8 715 aa17.11■□□□□ 0.33
ERCC6-204ENST00000462247 DNAJC5GQ8N7S2 189 aa17.11■□□□□ 0.33
ERCC6-204ENST00000462247 MARCH10Q8NA82 808 aaPredicted RBP17.11■□□□□ 0.33
ERCC6-204ENST00000462247 AATKQ6ZMQ8 1374 aa17.11■□□□□ 0.33
ERCC6-204ENST00000462247 USP47Q96K76 1375 aa17.11■□□□□ 0.33
ERCC6-204ENST00000462247 CRB1P82279 1406 aa17.11■□□□□ 0.33
ERCC6-204ENST00000462247 CPDO75976 1380 aa17.1■□□□□ 0.33
ERCC6-204ENST00000462247 BCL9O00512 1426 aa17.1■□□□□ 0.33
ERCC6-204ENST00000462247 COL5A2P05997 1499 aaPredicted RBP17.09■□□□□ 0.33
ERCC6-204ENST00000462247 TULP4Q9NRJ4 1543 aa17.09■□□□□ 0.33
ERCC6-204ENST00000462247 MINK1Q8N4C8 1332 aaPredicted RBP17.08■□□□□ 0.32
ERCC6-204ENST00000462247 SLC16A10Q8TF71 515 aa17.07■□□□□ 0.32
ERCC6-204ENST00000462247 AKAP12Q02952 1782 aa17.07■□□□□ 0.32
ERCC6-204ENST00000462247 CENPJQ9HC77 1338 aaPredicted RBP17.06■□□□□ 0.32
ERCC6-204ENST00000462247 ST20-MTHFSA0A0A6YYL1 179 aa17.06■□□□□ 0.32
ERCC6-204ENST00000462247 WASLO00401 505 aaPredicted RBP17.06■□□□□ 0.32
ERCC6-204ENST00000462247 TOPAZ1Q8N9V7 1692 aa17.06■□□□□ 0.32
ERCC6-204ENST00000462247 HSPA5P11021 654 aaKnown RBP17.05■□□□□ 0.32
ERCC6-204ENST00000462247 ADCY9O60503 1353 aa17.04■□□□□ 0.32
ERCC6-204ENST00000462247 ZNF827Q17R98 1081 aa17.04■□□□□ 0.32
ERCC6-204ENST00000462247 TOM1L2Q6ZVM7 507 aa17.04■□□□□ 0.32
ERCC6-204ENST00000462247 TESK2Q96S53 571 aa17.04■□□□□ 0.32
ERCC6-204ENST00000462247 PAPPAQ13219 1627 aa17.03■□□□□ 0.32
ERCC6-204ENST00000462247 ABTB2Q8N961 1025 aa17.03■□□□□ 0.32
ERCC6-204ENST00000462247 CDCA7Q9BWT1 371 aaPredicted RBP17.03■□□□□ 0.32
ERCC6-204ENST00000462247 KIF3CO14782 793 aa17.02■□□□□ 0.32
ERCC6-204ENST00000462247 COL24A1Q17RW2 1714 aa17.01■□□□□ 0.31
ERCC6-204ENST00000462247 ZBTB7CA1YPR0 619 aa17.01■□□□□ 0.31
ERCC6-204ENST00000462247 GCP02774 474 aa17.01■□□□□ 0.31
ERCC6-204ENST00000462247 ZEB1P37275 1124 aaPredicted RBP17.01■□□□□ 0.31
ERCC6-204ENST00000462247 PCNTO95613 3336 aa17■□□□□ 0.31
ERCC6-204ENST00000462247 ITSN1Q15811 1721 aa17■□□□□ 0.31
ERCC6-204ENST00000462247 SBNO2Q9Y2G9 1366 aa17■□□□□ 0.31
ERCC6-204ENST00000462247 USP19O94966 1318 aa16.99■□□□□ 0.31
ERCC6-204ENST00000462247 NUDT16Q96DE0 195 aaKnown RBP16.99■□□□□ 0.31
ERCC6-204ENST00000462247 WNK3Q9BYP7 1800 aa16.98■□□□□ 0.31
ERCC6-204ENST00000462247 EXOC5O00471 708 aa16.98■□□□□ 0.31
ERCC6-204ENST00000462247 EIF4G2P78344 907 aaKnown RBP eCLIP16.98■□□□□ 0.31
ERCC6-204ENST00000462247 NLRP13Q86W25 1043 aa16.97■□□□□ 0.31
ERCC6-204ENST00000462247 AKT1S1Q96B36 256 aa16.97■□□□□ 0.31
ERCC6-204ENST00000462247 PNPLA7Q6ZV29 1317 aa16.96■□□□□ 0.31
ERCC6-204ENST00000462247 JMYQ8N9B5 988 aa16.96■□□□□ 0.31
ERCC6-204ENST00000462247 ACSBG1Q96GR2 724 aa16.96■□□□□ 0.31
ERCC6-204ENST00000462247 CDK19Q9BWU1 502 aa16.96■□□□□ 0.31
ERCC6-204ENST00000462247 LRRC4BQ9NT99 713 aa16.96■□□□□ 0.31
ERCC6-204ENST00000462247 QSER1Q2KHR3 1735 aa16.96■□□□□ 0.3
ERCC6-204ENST00000462247 ACEP12821 1306 aa16.96■□□□□ 0.3
ERCC6-204ENST00000462247 NHSQ6T4R5 1651 aa16.95■□□□□ 0.3
ERCC6-204ENST00000462247 TOMM70O94826 608 aa16.95■□□□□ 0.3
ERCC6-204ENST00000462247 KLRG1Q96E93 195 aa16.95■□□□□ 0.3
ERCC6-204ENST00000462247 CABP2Q9NPB3 220 aa16.95■□□□□ 0.3
ERCC6-204ENST00000462247 PCDH10Q9P2E7 1040 aa16.95■□□□□ 0.3
ERCC6-204ENST00000462247 TFCP2L1Q9NZI6 479 aa16.94■□□□□ 0.3
ERCC6-204ENST00000462247 WDR17Q8IZU2 1322 aa16.94■□□□□ 0.3
ERCC6-204ENST00000462247 POLR3AO14802 1390 aaPredicted RBP16.93■□□□□ 0.3
ERCC6-204ENST00000462247 BRD4O60885 1362 aaPredicted RBP16.93■□□□□ 0.3
ERCC6-204ENST00000462247 WDR90Q96KV7 1748 aa16.93■□□□□ 0.3
ERCC6-204ENST00000462247 WWC3Q9ULE0 1092 aa16.92■□□□□ 0.3
ERCC6-204ENST00000462247 KAT6BQ8WYB5 2073 aa16.92■□□□□ 0.3
ERCC6-204ENST00000462247 USP6P35125 1406 aa16.9■□□□□ 0.3
ERCC6-204ENST00000462247 HTRA3P83110 453 aa16.9■□□□□ 0.3
ERCC6-204ENST00000462247 CARD10Q9BWT7 1032 aa16.9■□□□□ 0.3
ERCC6-204ENST00000462247 BTAF1O14981 1849 aa16.9■□□□□ 0.3
ERCC6-204ENST00000462247 EVC2Q86UK5 1308 aa16.9■□□□□ 0.3
ERCC6-204ENST00000462247 SRPK2P78362 688 aaKnown RBP16.89■□□□□ 0.29
ERCC6-204ENST00000462247 SLC27A3Q5K4L6 730 aa16.89■□□□□ 0.29
ERCC6-204ENST00000462247 AXIN2Q9Y2T1 843 aa16.89■□□□□ 0.29
ERCC6-204ENST00000462247 CD2APQ9Y5K6 639 aa16.89■□□□□ 0.29
ERCC6-204ENST00000462247 CSB-PGBD3P0DP91 1061 aa16.88■□□□□ 0.29
ERCC6-204ENST00000462247 CCDC61Q9Y6R9 512 aa16.88■□□□□ 0.29
ERCC6-204ENST00000462247 CD163L1Q9NR16 1453 aa16.87■□□□□ 0.29
ERCC6-204ENST00000462247 TUBGCP6Q96RT7 1819 aa16.87■□□□□ 0.29
ERCC6-204ENST00000462247 PLEKHG3A1L390 1219 aa16.87■□□□□ 0.29
ERCC6-204ENST00000462247 MSH5O43196 834 aa16.87■□□□□ 0.29
ERCC6-204ENST00000462247 TNS2Q63HR2 1409 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms