RNA–Protein interactions for RNA: ENST00000462219.5

LINC00879-201, long intergenic non-protein coding RNA 879, humanhuman

TSL 2

Gene LINC00879, Length 695 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-201ENST00000462219 VPS72Q15906 364 aa17.88■□□□□ 0.45
LINC00879-201ENST00000462219 ZBTB7CA1YPR0 619 aa17.87■□□□□ 0.45
LINC00879-201ENST00000462219 RXRBP28702 533 aa17.87■□□□□ 0.45
LINC00879-201ENST00000462219 RBM6P78332 1123 aaKnown RBP17.87■□□□□ 0.45
LINC00879-201ENST00000462219 GJD4Q96KN9 370 aaPredicted RBP17.87■□□□□ 0.45
LINC00879-201ENST00000462219 AMER1Q5JTC6 1135 aaPredicted RBP17.86■□□□□ 0.45
LINC00879-201ENST00000462219 KNSTRNQ9Y448 316 aa17.86■□□□□ 0.45
LINC00879-201ENST00000462219 COL5A2P05997 1499 aaPredicted RBP17.86■□□□□ 0.45
LINC00879-201ENST00000462219 ABCC6O95255 1503 aa17.86■□□□□ 0.45
LINC00879-201ENST00000462219 MAP3K19Q56UN5 1328 aa17.84■□□□□ 0.45
LINC00879-201ENST00000462219 STRN4Q9NRL3 753 aa17.84■□□□□ 0.45
LINC00879-201ENST00000462219 NSD2O96028 1365 aa17.83■□□□□ 0.45
LINC00879-201ENST00000462219 SPATA31A5Q5VU36 1347 aa17.83■□□□□ 0.44
LINC00879-201ENST00000462219 SPATA31A7Q8IWB4 1347 aa17.83■□□□□ 0.44
LINC00879-201ENST00000462219 RRS1Q15050 365 aaKnown RBP17.83■□□□□ 0.44
LINC00879-201ENST00000462219 LARP1Q6PKG0 1096 aaKnown RBP17.83■□□□□ 0.44
LINC00879-201ENST00000462219 PEAK1Q9H792 1746 aa17.83■□□□□ 0.44
LINC00879-201ENST00000462219 CDK12Q9NYV4 1490 aaPredicted RBP17.82■□□□□ 0.44
LINC00879-201ENST00000462219 EVA1CP58658 441 aa17.82■□□□□ 0.44
LINC00879-201ENST00000462219 IP6K1Q92551 441 aa17.82■□□□□ 0.44
LINC00879-201ENST00000462219 ONECUT3O60422 494 aaPredicted RBP17.81■□□□□ 0.44
LINC00879-201ENST00000462219 RGS12O14924 1447 aa17.81■□□□□ 0.44
LINC00879-201ENST00000462219 SPATA31A1Q5TZJ5 1347 aa17.8■□□□□ 0.44
LINC00879-201ENST00000462219 CCDC9Q9Y3X0 531 aaKnown RBP17.8■□□□□ 0.44
LINC00879-201ENST00000462219 NPC1L1Q9UHC9 1359 aa17.79■□□□□ 0.44
LINC00879-201ENST00000462219 BRWD3Q6RI45 1802 aa17.79■□□□□ 0.44
LINC00879-201ENST00000462219 WDR17Q8IZU2 1322 aa17.79■□□□□ 0.44
LINC00879-201ENST00000462219 HOXC9P31274 260 aa17.79■□□□□ 0.44
LINC00879-201ENST00000462219 BLMP54132 1417 aaPredicted RBP17.79■□□□□ 0.44
LINC00879-201ENST00000462219 RGPD2P0DJD1 1756 aa17.79■□□□□ 0.44
LINC00879-201ENST00000462219 POLKQ9UBT6 870 aa17.78■□□□□ 0.44
LINC00879-201ENST00000462219 EMILIN1Q9Y6C2 1016 aa17.78■□□□□ 0.44
LINC00879-201ENST00000462219 CRB1P82279 1406 aa17.78■□□□□ 0.44
LINC00879-201ENST00000462219 ERBB3P21860 1342 aa17.77■□□□□ 0.44
LINC00879-201ENST00000462219 TNNT2P45379 298 aaPredicted RBP17.77■□□□□ 0.44
LINC00879-201ENST00000462219 AMPHP49418 695 aa17.77■□□□□ 0.44
LINC00879-201ENST00000462219 MORC1Q86VD1 984 aa17.77■□□□□ 0.44
LINC00879-201ENST00000462219 RTL1A6NKG5 1358 aa17.77■□□□□ 0.43
LINC00879-201ENST00000462219 KIF24Q5T7B8 1368 aa17.77■□□□□ 0.43
LINC00879-201ENST00000462219 CC2D1BQ5T0F9 858 aaKnown RBP17.76■□□□□ 0.43
LINC00879-201ENST00000462219 ANKRD24Q8TF21 1146 aa17.76■□□□□ 0.43
LINC00879-201ENST00000462219 THSD7AQ9UPZ6 1657 aa17.76■□□□□ 0.43
LINC00879-201ENST00000462219 WNK3Q9BYP7 1800 aa17.75■□□□□ 0.43
LINC00879-201ENST00000462219 FAM98CQ17RN3 349 aaKnown RBP17.75■□□□□ 0.43
LINC00879-201ENST00000462219 HSP90AB2PQ58FF8 381 aa17.75■□□□□ 0.43
LINC00879-201ENST00000462219 TOM1L2Q6ZVM7 507 aa17.75■□□□□ 0.43
LINC00879-201ENST00000462219 USP35Q9P2H5 1018 aa17.75■□□□□ 0.43
LINC00879-201ENST00000462219 FAM208AQ9UK61 1670 aaKnown RBP17.74■□□□□ 0.43
LINC00879-201ENST00000462219 DDX10Q13206 875 aaKnown RBP17.74■□□□□ 0.43
LINC00879-201ENST00000462219 BARGINQ6ZT62 677 aa17.74■□□□□ 0.43
LINC00879-201ENST00000462219 CARD10Q9BWT7 1032 aa17.74■□□□□ 0.43
LINC00879-201ENST00000462219 INSRP06213 1382 aa17.74■□□□□ 0.43
LINC00879-201ENST00000462219 FLT4P35916 1363 aa17.74■□□□□ 0.43
LINC00879-201ENST00000462219 SEPT12Q8IYM1 358 aa17.73■□□□□ 0.43
LINC00879-201ENST00000462219 TCP11L2Q8N4U5 519 aa17.73■□□□□ 0.43
LINC00879-201ENST00000462219 THRAP3Q9Y2W1 955 aaKnown RBP17.73■□□□□ 0.43
LINC00879-201ENST00000462219 SMG6Q86US8 1419 aaKnown RBP17.72■□□□□ 0.43
LINC00879-201ENST00000462219 CSB-PGBD3P0DP91 1061 aa17.72■□□□□ 0.43
LINC00879-201ENST00000462219 LTV1Q96GA3 475 aaPredicted RBP17.72■□□□□ 0.43
LINC00879-201ENST00000462219 ZNF316A6NFI3 1004 aaPredicted RBP17.71■□□□□ 0.43
LINC00879-201ENST00000462219 PARP4Q9UKK3 1724 aaKnown RBP17.7■□□□□ 0.42
LINC00879-201ENST00000462219 PPM1GO15355 546 aaPredicted RBP17.7■□□□□ 0.42
LINC00879-201ENST00000462219 CNGB1Q14028 1251 aaPredicted RBP17.7■□□□□ 0.42
LINC00879-201ENST00000462219 NLRP2Q9NX02 1062 aa17.7■□□□□ 0.42
LINC00879-201ENST00000462219 DISP2A7MBM2 1401 aa17.69■□□□□ 0.42
LINC00879-201ENST00000462219 NBPF6Q5VWK0 638 aa17.68■□□□□ 0.42
LINC00879-201ENST00000462219 NBPF4Q96M43 638 aa17.68■□□□□ 0.42
LINC00879-201ENST00000462219 LRRC37A3O60309 1634 aa17.66■□□□□ 0.42
LINC00879-201ENST00000462219 MTHFSP49914 203 aa17.66■□□□□ 0.42
LINC00879-201ENST00000462219 A0A0G2JS52 829 aa17.65■□□□□ 0.42
LINC00879-201ENST00000462219 SOCS7O14512 581 aa17.65■□□□□ 0.42
LINC00879-201ENST00000462219 MYT1Q01538 1121 aa17.65■□□□□ 0.42
LINC00879-201ENST00000462219 EIF4A2Q14240 407 aaKnown RBP17.65■□□□□ 0.42
LINC00879-201ENST00000462219 KRT27Q7Z3Y8 459 aa17.65■□□□□ 0.42
LINC00879-201ENST00000462219 NCAPD2Q15021 1401 aa17.64■□□□□ 0.41
LINC00879-201ENST00000462219 CDCA7Q9BWT1 371 aaPredicted RBP17.63■□□□□ 0.41
LINC00879-201ENST00000462219 PARD3Q8TEW0 1356 aa17.63■□□□□ 0.41
LINC00879-201ENST00000462219 RGPD1P0DJD0 1748 aa17.62■□□□□ 0.41
LINC00879-201ENST00000462219 IL2RBP14784 551 aa17.62■□□□□ 0.41
LINC00879-201ENST00000462219 PPP2R1AP30153 589 aa17.62■□□□□ 0.41
LINC00879-201ENST00000462219 USHBP1Q8N6Y0 703 aa17.62■□□□□ 0.41
LINC00879-201ENST00000462219 EYA1Q99502 592 aa17.62■□□□□ 0.41
LINC00879-201ENST00000462219 EP400Q96L91 3159 aa17.61■□□□□ 0.41
LINC00879-201ENST00000462219 FAM182BQ5T319 152 aa17.61■□□□□ 0.41
LINC00879-201ENST00000462219 IL13P35225 146 aa17.6■□□□□ 0.41
LINC00879-201ENST00000462219 DDB1Q16531 1140 aa17.6■□□□□ 0.41
LINC00879-201ENST00000462219 COL3A1P02461 1466 aaPredicted RBP17.6■□□□□ 0.41
LINC00879-201ENST00000462219 MEGF6O75095 1541 aa17.6■□□□□ 0.41
LINC00879-201ENST00000462219 SHANK3Q9BYB0 1731 aa17.6■□□□□ 0.41
LINC00879-201ENST00000462219 UPF1Q92900 1129 aaKnown RBP eCLIP17.59■□□□□ 0.41
LINC00879-201ENST00000462219 IGSF1Q8N6C5 1336 aa17.58■□□□□ 0.4
LINC00879-201ENST00000462219 EXOC5O00471 708 aa17.58■□□□□ 0.4
LINC00879-201ENST00000462219 PDE3BQ13370 1112 aa17.58■□□□□ 0.4
LINC00879-201ENST00000462219 SBF2Q86WG5 1849 aa17.58■□□□□ 0.4
LINC00879-201ENST00000462219 TNS2Q63HR2 1409 aa17.57■□□□□ 0.4
LINC00879-201ENST00000462219 MARCH10Q8NA82 808 aaPredicted RBP17.57■□□□□ 0.4
LINC00879-201ENST00000462219 OVOS2A0A0G2JMS6 1433 aa17.55■□□□□ 0.4
LINC00879-201ENST00000462219 RALBP1Q15311 655 aa17.55■□□□□ 0.4
LINC00879-201ENST00000462219 PKD1L3Q7Z443 1732 aa17.55■□□□□ 0.4
LINC00879-201ENST00000462219 DIAPH1O60610 1272 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms