RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 NUTM2AQ8IVF1 878 aaPredicted RBP18.1■□□□□ 0.49
PBRM1-219ENST00000462207 INSRP06213 1382 aa18.09■□□□□ 0.49
PBRM1-219ENST00000462207 PNISRQ8TF01 805 aaKnown RBP18.09■□□□□ 0.49
PBRM1-219ENST00000462207 KIF24Q5T7B8 1368 aa18.09■□□□□ 0.49
PBRM1-219ENST00000462207 IP6K1Q92551 441 aa18.08■□□□□ 0.49
PBRM1-219ENST00000462207 PRDM11Q9NQV5 511 aa18.08■□□□□ 0.49
PBRM1-219ENST00000462207 RGPD5Q99666 1765 aa18.08■□□□□ 0.48
PBRM1-219ENST00000462207 FAM9BQ8IZU0 186 aa18.08■□□□□ 0.48
PBRM1-219ENST00000462207 AXIN2Q9Y2T1 843 aa18.08■□□□□ 0.48
PBRM1-219ENST00000462207 LMO7Q8WWI1 1683 aa18.07■□□□□ 0.48
PBRM1-219ENST00000462207 DIAPH1O60610 1272 aaKnown RBP18.07■□□□□ 0.48
PBRM1-219ENST00000462207 EIF4A2Q14240 407 aaKnown RBP18.07■□□□□ 0.48
PBRM1-219ENST00000462207 LRP6O75581 1613 aa18.06■□□□□ 0.48
PBRM1-219ENST00000462207 ADAMTS2O95450 1211 aa18.06■□□□□ 0.48
PBRM1-219ENST00000462207 LTV1Q96GA3 475 aaPredicted RBP18.06■□□□□ 0.48
PBRM1-219ENST00000462207 IL13P35225 146 aa18.06■□□□□ 0.48
PBRM1-219ENST00000462207 ABCC6O95255 1503 aa18.05■□□□□ 0.48
PBRM1-219ENST00000462207 FBXO41Q8TF61 875 aa18.05■□□□□ 0.48
PBRM1-219ENST00000462207 BLMP54132 1417 aaPredicted RBP18.05■□□□□ 0.48
PBRM1-219ENST00000462207 CAMTA1Q9Y6Y1 1673 aa18.04■□□□□ 0.48
PBRM1-219ENST00000462207 FAM83GA6ND36 823 aa18.04■□□□□ 0.48
PBRM1-219ENST00000462207 U2SURPO15042 1029 aaKnown RBP18.04■□□□□ 0.48
PBRM1-219ENST00000462207 WDR43Q15061 677 aaKnown RBP eCLIP18.04■□□□□ 0.48
PBRM1-219ENST00000462207 RGPD1P0DJD0 1748 aa18.03■□□□□ 0.48
PBRM1-219ENST00000462207 COL14A1Q05707 1796 aaKnown RBP18.03■□□□□ 0.48
PBRM1-219ENST00000462207 SPATA31A6Q5VVP1 1343 aa18.02■□□□□ 0.48
PBRM1-219ENST00000462207 ADAMTS8Q9UP79 889 aa18.02■□□□□ 0.48
PBRM1-219ENST00000462207 ANKRD24Q8TF21 1146 aa18.02■□□□□ 0.47
PBRM1-219ENST00000462207 PLCH1Q4KWH8 1693 aa18.01■□□□□ 0.47
PBRM1-219ENST00000462207 U2AF1L5P0DN76 240 aaPredicted RBP18.01■□□□□ 0.47
PBRM1-219ENST00000462207 U2AF1Q01081 240 aaKnown RBP eCLIP18.01■□□□□ 0.47
PBRM1-219ENST00000462207 RGPD2P0DJD1 1756 aa18.01■□□□□ 0.47
PBRM1-219ENST00000462207 ERBB3P21860 1342 aa18.01■□□□□ 0.47
PBRM1-219ENST00000462207 NUDCQ9Y266 331 aa18■□□□□ 0.47
PBRM1-219ENST00000462207 COL5A2P05997 1499 aaPredicted RBP18■□□□□ 0.47
PBRM1-219ENST00000462207 EYA1Q99502 592 aa17.99■□□□□ 0.47
PBRM1-219ENST00000462207 SENP3-EIF4A1A0A087X0R7 540 aa17.98■□□□□ 0.47
PBRM1-219ENST00000462207 HMOX1P09601 288 aa17.98■□□□□ 0.47
PBRM1-219ENST00000462207 AEBP1Q8IUX7 1158 aa17.98■□□□□ 0.47
PBRM1-219ENST00000462207 USHBP1Q8N6Y0 703 aa17.98■□□□□ 0.47
PBRM1-219ENST00000462207 BTG4Q9NY30 223 aa17.98■□□□□ 0.47
PBRM1-219ENST00000462207 IGSF1Q8N6C5 1336 aa17.97■□□□□ 0.47
PBRM1-219ENST00000462207 CCDC146Q8IYE0 955 aa17.97■□□□□ 0.47
PBRM1-219ENST00000462207 NRAPQ86VF7 1730 aa17.97■□□□□ 0.47
PBRM1-219ENST00000462207 CSB-PGBD3P0DP91 1061 aa17.96■□□□□ 0.47
PBRM1-219ENST00000462207 NBPF6Q5VWK0 638 aa17.96■□□□□ 0.47
PBRM1-219ENST00000462207 NBPF4Q96M43 638 aa17.96■□□□□ 0.47
PBRM1-219ENST00000462207 YTHDC1Q96MU7 727 aaKnown RBP17.96■□□□□ 0.47
PBRM1-219ENST00000462207 STRN4Q9NRL3 753 aa17.96■□□□□ 0.47
PBRM1-219ENST00000462207 C8orf37Q96NL8 207 aa17.96■□□□□ 0.47
PBRM1-219ENST00000462207 FAM208AQ9UK61 1670 aaKnown RBP17.95■□□□□ 0.46
PBRM1-219ENST00000462207 SULT6B1Q6IMI4 303 aa17.95■□□□□ 0.46
PBRM1-219ENST00000462207 SLIT2O94813 1529 aa17.95■□□□□ 0.46
PBRM1-219ENST00000462207 RSPH6AQ9H0K4 717 aa17.94■□□□□ 0.46
PBRM1-219ENST00000462207 LARP1Q6PKG0 1096 aaKnown RBP17.94■□□□□ 0.46
PBRM1-219ENST00000462207 NLRP2Q9NX02 1062 aa17.94■□□□□ 0.46
PBRM1-219ENST00000462207 WDR17Q8IZU2 1322 aa17.93■□□□□ 0.46
PBRM1-219ENST00000462207 NWD2Q9ULI1 1742 aa17.93■□□□□ 0.46
PBRM1-219ENST00000462207 NCAPD2Q15021 1401 aa17.93■□□□□ 0.46
PBRM1-219ENST00000462207 PRKAR2BP31323 418 aa17.92■□□□□ 0.46
PBRM1-219ENST00000462207 MEX3CQ5U5Q3 659 aaKnown RBP17.92■□□□□ 0.46
PBRM1-219ENST00000462207 KDRP35968 1356 aa17.92■□□□□ 0.46
PBRM1-219ENST00000462207 EVA1CP58658 441 aa17.92■□□□□ 0.46
PBRM1-219ENST00000462207 NGLY1Q96IV0 654 aa17.92■□□□□ 0.46
PBRM1-219ENST00000462207 TOM1L2Q6ZVM7 507 aa17.91■□□□□ 0.46
PBRM1-219ENST00000462207 PLEKHF1Q96S99 279 aa17.91■□□□□ 0.46
PBRM1-219ENST00000462207 FCHSD2O94868 740 aa17.9■□□□□ 0.46
PBRM1-219ENST00000462207 BCL9LQ86UU0 1499 aa17.89■□□□□ 0.45
PBRM1-219ENST00000462207 CRB1P82279 1406 aa17.89■□□□□ 0.45
PBRM1-219ENST00000462207 HNRNPUQ00839 825 aaKnown RBP eCLIP17.88■□□□□ 0.45
PBRM1-219ENST00000462207 RUNDC1Q96C34 613 aa17.88■□□□□ 0.45
PBRM1-219ENST00000462207 PHACTR3Q96KR7 559 aa17.88■□□□□ 0.45
PBRM1-219ENST00000462207 MEGF6O75095 1541 aa17.88■□□□□ 0.45
PBRM1-219ENST00000462207 APAF1O14727 1248 aa17.87■□□□□ 0.45
PBRM1-219ENST00000462207 FNBP4Q8N3X1 1017 aaPredicted RBP17.87■□□□□ 0.45
PBRM1-219ENST00000462207 USP35Q9P2H5 1018 aa17.87■□□□□ 0.45
PBRM1-219ENST00000462207 AFF2P51816 1311 aa17.86■□□□□ 0.45
PBRM1-219ENST00000462207 RRP7AQ9Y3A4 280 aaKnown RBP17.86■□□□□ 0.45
PBRM1-219ENST00000462207 MAPK8IP3Q9UPT6 1336 aa17.86■□□□□ 0.45
PBRM1-219ENST00000462207 UNC5CLQ8IV45 518 aa17.86■□□□□ 0.45
PBRM1-219ENST00000462207 CARD10Q9BWT7 1032 aa17.86■□□□□ 0.45
PBRM1-219ENST00000462207 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.85■□□□□ 0.45
PBRM1-219ENST00000462207 TCP11L2Q8N4U5 519 aa17.85■□□□□ 0.45
PBRM1-219ENST00000462207 SALL2Q9Y467 1007 aaPredicted RBP17.85■□□□□ 0.45
PBRM1-219ENST00000462207 USP21Q9UK80 565 aa17.84■□□□□ 0.45
PBRM1-219ENST00000462207 PNNQ9H307 717 aaKnown RBP17.83■□□□□ 0.44
PBRM1-219ENST00000462207 NEUROD2Q15784 382 aa17.82■□□□□ 0.44
PBRM1-219ENST00000462207 CCDC9Q9Y3X0 531 aaKnown RBP17.82■□□□□ 0.44
PBRM1-219ENST00000462207 WNK3Q9BYP7 1800 aa17.82■□□□□ 0.44
PBRM1-219ENST00000462207 SPATA31A1Q5TZJ5 1347 aa17.81■□□□□ 0.44
PBRM1-219ENST00000462207 SPATA31A5Q5VU36 1347 aa17.81■□□□□ 0.44
PBRM1-219ENST00000462207 SPATA31A7Q8IWB4 1347 aa17.81■□□□□ 0.44
PBRM1-219ENST00000462207 RAPGEF4Q8WZA2 1011 aa17.81■□□□□ 0.44
PBRM1-219ENST00000462207 PARP4Q9UKK3 1724 aaKnown RBP17.81■□□□□ 0.44
PBRM1-219ENST00000462207 NEFMP07197 916 aa17.8■□□□□ 0.44
PBRM1-219ENST00000462207 TMPOP42166 694 aaKnown RBP17.8■□□□□ 0.44
PBRM1-219ENST00000462207 MTHFSDQ2M296 383 aaKnown RBP17.8■□□□□ 0.44
PBRM1-219ENST00000462207 OVOS2A0A0G2JMS6 1433 aa17.8■□□□□ 0.44
PBRM1-219ENST00000462207 DISP2A7MBM2 1401 aa17.8■□□□□ 0.44
PBRM1-219ENST00000462207 VPS72Q15906 364 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms