RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 CRB1P82279 1406 aa18.55■□□□□ 0.56
C9orf3-210ENST00000462125 COL18A1P39060 1754 aa18.55■□□□□ 0.56
C9orf3-210ENST00000462125 DEFB132Q7Z7B7 95 aa18.54■□□□□ 0.56
C9orf3-210ENST00000462125 WDR17Q8IZU2 1322 aa18.53■□□□□ 0.56
C9orf3-210ENST00000462125 SOX12O15370 315 aa18.53■□□□□ 0.56
C9orf3-210ENST00000462125 FAM196AQ6ZSG2 479 aa18.53■□□□□ 0.56
C9orf3-210ENST00000462125 CDCA8Q53HL2 280 aa18.52■□□□□ 0.56
C9orf3-210ENST00000462125 CCER1Q8TC90 406 aaPredicted RBP18.52■□□□□ 0.56
C9orf3-210ENST00000462125 NFAT5O94916 1531 aa18.52■□□□□ 0.56
C9orf3-210ENST00000462125 PDE3BQ13370 1112 aa18.51■□□□□ 0.55
C9orf3-210ENST00000462125 TOM1L2Q6ZVM7 507 aa18.51■□□□□ 0.55
C9orf3-210ENST00000462125 BAG6P46379 1132 aa18.49■□□□□ 0.55
C9orf3-210ENST00000462125 CARD10Q9BWT7 1032 aa18.49■□□□□ 0.55
C9orf3-210ENST00000462125 ANKRD36BQ8N2N9 1353 aa18.49■□□□□ 0.55
C9orf3-210ENST00000462125 USP54Q70EL1 1684 aa18.49■□□□□ 0.55
C9orf3-210ENST00000462125 CDCA7Q9BWT1 371 aaPredicted RBP18.48■□□□□ 0.55
C9orf3-210ENST00000462125 OVOS2A0A0J9YW53 1432 aa18.48■□□□□ 0.55
C9orf3-210ENST00000462125 OVOS2Q6IE36 1432 aa18.48■□□□□ 0.55
C9orf3-210ENST00000462125 ABCC6O95255 1503 aa18.47■□□□□ 0.55
C9orf3-210ENST00000462125 C11orf95C9JLR9 678 aaPredicted RBP18.46■□□□□ 0.55
C9orf3-210ENST00000462125 TRIM37O94972 964 aa18.45■□□□□ 0.54
C9orf3-210ENST00000462125 CSB-PGBD3P0DP91 1061 aa18.45■□□□□ 0.54
C9orf3-210ENST00000462125 COG3Q96JB2 828 aa18.45■□□□□ 0.54
C9orf3-210ENST00000462125 DISP2A7MBM2 1401 aa18.44■□□□□ 0.54
C9orf3-210ENST00000462125 FYB1O15117 783 aa18.44■□□□□ 0.54
C9orf3-210ENST00000462125 EN1Q05925 392 aaPredicted RBP18.44■□□□□ 0.54
C9orf3-210ENST00000462125 DDB1Q16531 1140 aa18.44■□□□□ 0.54
C9orf3-210ENST00000462125 ERBB3P21860 1342 aa18.44■□□□□ 0.54
C9orf3-210ENST00000462125 IP6K1Q92551 441 aa18.43■□□□□ 0.54
C9orf3-210ENST00000462125 PARP4Q9UKK3 1724 aaKnown RBP18.43■□□□□ 0.54
C9orf3-210ENST00000462125 CCDC7Q96M83 1385 aa18.42■□□□□ 0.54
C9orf3-210ENST00000462125 RGPD5Q99666 1765 aa18.42■□□□□ 0.54
C9orf3-210ENST00000462125 CAMKK2Q96RR4 588 aa18.41■□□□□ 0.54
C9orf3-210ENST00000462125 RGPD1P0DJD0 1748 aa18.4■□□□□ 0.54
C9orf3-210ENST00000462125 APBA3O96018 575 aa18.4■□□□□ 0.54
C9orf3-210ENST00000462125 EIF4G2P78344 907 aaKnown RBP eCLIP18.4■□□□□ 0.54
C9orf3-210ENST00000462125 ANKRD24Q8TF21 1146 aa18.4■□□□□ 0.54
C9orf3-210ENST00000462125 CARD14Q9BXL6 1004 aa18.4■□□□□ 0.54
C9orf3-210ENST00000462125 EXOC5O00471 708 aa18.39■□□□□ 0.53
C9orf3-210ENST00000462125 EZH2Q15910 746 aaKnown RBP18.39■□□□□ 0.53
C9orf3-210ENST00000462125 MARCH10Q8NA82 808 aaPredicted RBP18.39■□□□□ 0.53
C9orf3-210ENST00000462125 FBLN1P23142 703 aa18.38■□□□□ 0.53
C9orf3-210ENST00000462125 GGNBP2Q9H3C7 697 aa18.38■□□□□ 0.53
C9orf3-210ENST00000462125 NLRP2Q9NX02 1062 aa18.38■□□□□ 0.53
C9orf3-210ENST00000462125 MAP3K19Q56UN5 1328 aa18.38■□□□□ 0.53
C9orf3-210ENST00000462125 BCL9O00512 1426 aa18.38■□□□□ 0.53
C9orf3-210ENST00000462125 HSPA5P11021 654 aaKnown RBP18.37■□□□□ 0.53
C9orf3-210ENST00000462125 HOXC9P31274 260 aa18.37■□□□□ 0.53
C9orf3-210ENST00000462125 PARD3Q8TEW0 1356 aa18.37■□□□□ 0.53
C9orf3-210ENST00000462125 OVOS2A0A0G2JMS6 1433 aa18.37■□□□□ 0.53
C9orf3-210ENST00000462125 TNS1Q9HBL0 1735 aaKnown RBP18.36■□□□□ 0.53
C9orf3-210ENST00000462125 LTN1O94822 1766 aa18.35■□□□□ 0.53
C9orf3-210ENST00000462125 IL2RBP14784 551 aa18.35■□□□□ 0.53
C9orf3-210ENST00000462125 PEAK1Q9H792 1746 aa18.35■□□□□ 0.53
C9orf3-210ENST00000462125 LRRC37A3O60309 1634 aa18.34■□□□□ 0.53
C9orf3-210ENST00000462125 AMPHP49418 695 aa18.34■□□□□ 0.53
C9orf3-210ENST00000462125 BCL11BQ9C0K0 894 aaPredicted RBP18.34■□□□□ 0.53
C9orf3-210ENST00000462125 PLSCR1O15162 318 aa18.33■□□□□ 0.52
C9orf3-210ENST00000462125 RRS1Q15050 365 aaKnown RBP18.32■□□□□ 0.52
C9orf3-210ENST00000462125 WNK3Q9BYP7 1800 aa18.31■□□□□ 0.52
C9orf3-210ENST00000462125 LTV1Q96GA3 475 aaPredicted RBP18.31■□□□□ 0.52
C9orf3-210ENST00000462125 RTL1A6NKG5 1358 aa18.3■□□□□ 0.52
C9orf3-210ENST00000462125 PTF1AQ7RTS3 328 aa18.3■□□□□ 0.52
C9orf3-210ENST00000462125 MYOM1P52179 1685 aa18.3■□□□□ 0.52
C9orf3-210ENST00000462125 TNS2Q63HR2 1409 aa18.3■□□□□ 0.52
C9orf3-210ENST00000462125 NSD3Q9BZ95 1437 aa18.3■□□□□ 0.52
C9orf3-210ENST00000462125 KIF24Q5T7B8 1368 aa18.3■□□□□ 0.52
C9orf3-210ENST00000462125 PSDA5PKW4 1024 aaPredicted RBP18.29■□□□□ 0.52
C9orf3-210ENST00000462125 CGNL1Q0VF96 1302 aa18.27■□□□□ 0.52
C9orf3-210ENST00000462125 R3HDM1Q15032 1099 aaKnown RBP18.27■□□□□ 0.52
C9orf3-210ENST00000462125 HSP90AB2PQ58FF8 381 aa18.27■□□□□ 0.52
C9orf3-210ENST00000462125 NBPF6Q5VWK0 638 aa18.27■□□□□ 0.52
C9orf3-210ENST00000462125 NBPF4Q96M43 638 aa18.27■□□□□ 0.52
C9orf3-210ENST00000462125 POLR3GLQ9BT43 218 aa18.27■□□□□ 0.52
C9orf3-210ENST00000462125 SBF2Q86WG5 1849 aa18.26■□□□□ 0.51
C9orf3-210ENST00000462125 INSRP06213 1382 aa18.26■□□□□ 0.51
C9orf3-210ENST00000462125 NBPF14Q5TI25 921 aa18.25■□□□□ 0.51
C9orf3-210ENST00000462125 PROM2Q8N271 834 aa18.25■□□□□ 0.51
C9orf3-210ENST00000462125 PANK3Q9H999 370 aa18.25■□□□□ 0.51
C9orf3-210ENST00000462125 KCNQ2O43526 872 aa18.24■□□□□ 0.51
C9orf3-210ENST00000462125 FLT4P35916 1363 aa18.24■□□□□ 0.51
C9orf3-210ENST00000462125 FAM208AQ9UK61 1670 aaKnown RBP18.23■□□□□ 0.51
C9orf3-210ENST00000462125 KIF20BQ96Q89 1820 aa18.23■□□□□ 0.51
C9orf3-210ENST00000462125 EMILIN1Q9Y6C2 1016 aa18.22■□□□□ 0.51
C9orf3-210ENST00000462125 WASHC2AQ641Q2 1341 aa18.22■□□□□ 0.51
C9orf3-210ENST00000462125 RREB1Q92766 1687 aa18.22■□□□□ 0.51
C9orf3-210ENST00000462125 LRP5O75197 1615 aa18.21■□□□□ 0.51
C9orf3-210ENST00000462125 ZCRB1Q8TBF4 217 aaKnown RBP18.21■□□□□ 0.51
C9orf3-210ENST00000462125 DDX54Q8TDD1 881 aaKnown RBP18.21■□□□□ 0.51
C9orf3-210ENST00000462125 ACSBG1Q96GR2 724 aa18.2■□□□□ 0.5
C9orf3-210ENST00000462125 POLKQ9UBT6 870 aa18.2■□□□□ 0.5
C9orf3-210ENST00000462125 SMG6Q86US8 1419 aaKnown RBP18.2■□□□□ 0.5
C9orf3-210ENST00000462125 TXNRD1Q16881 649 aa18.19■□□□□ 0.5
C9orf3-210ENST00000462125 RGPD3A6NKT7 1758 aaPredicted RBP18.19■□□□□ 0.5
C9orf3-210ENST00000462125 RGPD4Q7Z3J3 1758 aa18.19■□□□□ 0.5
C9orf3-210ENST00000462125 NUP188Q5SRE5 1749 aa18.18■□□□□ 0.5
C9orf3-210ENST00000462125 RAPGEF4Q8WZA2 1011 aa18.18■□□□□ 0.5
C9orf3-210ENST00000462125 USHBP1Q8N6Y0 703 aa18.17■□□□□ 0.5
C9orf3-210ENST00000462125 MEGF6O75095 1541 aa18.17■□□□□ 0.5
C9orf3-210ENST00000462125 PPM1GO15355 546 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms