RNA–Protein interactions for RNA: ENST00000462080.1

GPCPD1-203, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 633 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-203ENST00000462080 SOBPA7XYQ1 873 aa12.43□□□□□ -0.42
GPCPD1-203ENST00000462080 USP17L8P0C7I0 530 aa12.43□□□□□ -0.42
GPCPD1-203ENST00000462080 VEGFBP49765 207 aa12.43□□□□□ -0.42
GPCPD1-203ENST00000462080 ZBTB33Q86T24 672 aa12.43□□□□□ -0.42
GPCPD1-203ENST00000462080 CDV3Q9UKY7 258 aaKnown RBP12.43□□□□□ -0.42
GPCPD1-203ENST00000462080 H3BM21 787 aa12.42□□□□□ -0.42
GPCPD1-203ENST00000462080 BMP2P12643 396 aa12.42□□□□□ -0.42
GPCPD1-203ENST00000462080 RFC5P40937 340 aa12.42□□□□□ -0.42
GPCPD1-203ENST00000462080 IRF7Q92985 503 aa12.42□□□□□ -0.42
GPCPD1-203ENST00000462080 PTK2Q05397 1052 aa12.41□□□□□ -0.42
GPCPD1-203ENST00000462080 EPS8L1Q8TE68 723 aa12.41□□□□□ -0.42
GPCPD1-203ENST00000462080 GOPCQ9HD26 462 aa12.41□□□□□ -0.42
GPCPD1-203ENST00000462080 HMX1Q9NP08 348 aaPredicted RBP12.41□□□□□ -0.42
GPCPD1-203ENST00000462080 GPSM3Q9Y4H4 160 aa12.41□□□□□ -0.42
GPCPD1-203ENST00000462080 MAN1A2O60476 641 aa12.4□□□□□ -0.42
GPCPD1-203ENST00000462080 PPP1R26Q5T8A7 1209 aaPredicted RBP12.4□□□□□ -0.42
GPCPD1-203ENST00000462080 KCTD15Q96SI1 283 aaPredicted RBP12.4□□□□□ -0.42
GPCPD1-203ENST00000462080 OCSTAMPQ9BR26 566 aa12.4□□□□□ -0.42
GPCPD1-203ENST00000462080 NEUROD2Q15784 382 aa12.39□□□□□ -0.43
GPCPD1-203ENST00000462080 PNMA1Q8ND90 353 aa12.39□□□□□ -0.43
GPCPD1-203ENST00000462080 PCMTD1Q96MG8 357 aaPredicted RBP12.39□□□□□ -0.43
GPCPD1-203ENST00000462080 TSEN34Q9BSV6 310 aaKnown RBP12.39□□□□□ -0.43
GPCPD1-203ENST00000462080 PGPEP1Q9NXJ5 209 aa12.39□□□□□ -0.43
GPCPD1-203ENST00000462080 ADAM32Q8TC27 787 aa12.38□□□□□ -0.43
GPCPD1-203ENST00000462080 STK17AQ9UEE5 414 aa12.38□□□□□ -0.43
GPCPD1-203ENST00000462080 GMPRP36959 345 aa12.37□□□□□ -0.43
GPCPD1-203ENST00000462080 DHX9Q08211 1270 aaKnown RBP12.36□□□□□ -0.43
GPCPD1-203ENST00000462080 ERBB4Q15303 1308 aa12.36□□□□□ -0.43
GPCPD1-203ENST00000462080 INTS6LQ5JSJ4 861 aaKnown RBP12.35□□□□□ -0.43
GPCPD1-203ENST00000462080 SOS2Q07890 1332 aaPredicted RBP12.35□□□□□ -0.43
GPCPD1-203ENST00000462080 CBLBQ13191 982 aa12.34□□□□□ -0.43
GPCPD1-203ENST00000462080 Q6ZVU0 165 aa12.33□□□□□ -0.44
GPCPD1-203ENST00000462080 IL27Q8NEV9 243 aa12.33□□□□□ -0.44
GPCPD1-203ENST00000462080 DNMT3LQ9UJW3 386 aa12.33□□□□□ -0.44
GPCPD1-203ENST00000462080 NBPF20Q3BBV1 942 aa12.32□□□□□ -0.44
GPCPD1-203ENST00000462080 TMEM259Q4ZIN3 620 aa12.32□□□□□ -0.44
GPCPD1-203ENST00000462080 TRIM34Q9BYJ4 488 aa12.31□□□□□ -0.44
GPCPD1-203ENST00000462080 TTLL8A6PVC2 850 aa12.29□□□□□ -0.44
GPCPD1-203ENST00000462080 VSIG8P0DPA2 414 aa12.29□□□□□ -0.44
GPCPD1-203ENST00000462080 BRPF1P55201 1214 aaPredicted RBP12.28□□□□□ -0.44
GPCPD1-203ENST00000462080 DZIP3Q86Y13 1208 aaKnown RBP12.28□□□□□ -0.44
GPCPD1-203ENST00000462080 SPINT1O43278 529 aa12.27□□□□□ -0.45
GPCPD1-203ENST00000462080 PPFIA3O75145 1194 aa12.27□□□□□ -0.45
GPCPD1-203ENST00000462080 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.27□□□□□ -0.45
GPCPD1-203ENST00000462080 RAB15P59190 212 aa12.25□□□□□ -0.45
GPCPD1-203ENST00000462080 ZSCAN1Q8NBB4 408 aa12.24□□□□□ -0.45
GPCPD1-203ENST00000462080 AGBL1Q96MI9 1066 aa12.24□□□□□ -0.45
GPCPD1-203ENST00000462080 TMPRSS4Q9NRS4 437 aa12.24□□□□□ -0.45
GPCPD1-203ENST00000462080 FIGNL2A6NMB9 653 aa12.23□□□□□ -0.45
GPCPD1-203ENST00000462080 LORP23490 312 aaPredicted RBP12.23□□□□□ -0.45
GPCPD1-203ENST00000462080 RELBQ01201 579 aa12.23□□□□□ -0.45
GPCPD1-203ENST00000462080 ZNF784Q8NCA9 323 aaPredicted RBP12.23□□□□□ -0.45
GPCPD1-203ENST00000462080 GJD4Q96KN9 370 aaPredicted RBP12.23□□□□□ -0.45
GPCPD1-203ENST00000462080 FAM181BA6NEQ2 426 aa12.22□□□□□ -0.45
GPCPD1-203ENST00000462080 ESPNB1AK53 854 aa12.22□□□□□ -0.45
GPCPD1-203ENST00000462080 ERVH48-1M5A8F1 160 aa12.21□□□□□ -0.45
GPCPD1-203ENST00000462080 ZBBXA8MT70 800 aa12.2□□□□□ -0.46
GPCPD1-203ENST00000462080 PTSQ03393 145 aa12.2□□□□□ -0.46
GPCPD1-203ENST00000462080 CTSOP43234 321 aaPredicted RBP12.19□□□□□ -0.46
GPCPD1-203ENST00000462080 SEPT12Q8IYM1 358 aa12.19□□□□□ -0.46
GPCPD1-203ENST00000462080 INSM2Q96T92 566 aaPredicted RBP12.19□□□□□ -0.46
GPCPD1-203ENST00000462080 LILRA1O75019 489 aa12.18□□□□□ -0.46
GPCPD1-203ENST00000462080 ADH1AP07327 375 aa12.18□□□□□ -0.46
GPCPD1-203ENST00000462080 FBXO45P0C2W1 286 aa12.18□□□□□ -0.46
GPCPD1-203ENST00000462080 ZNF395Q9H8N7 513 aaPredicted RBP12.17□□□□□ -0.46
GPCPD1-203ENST00000462080 POLMQ9NP87 494 aaPredicted RBP12.17□□□□□ -0.46
GPCPD1-203ENST00000462080 PCDHB9Q9Y5E1 797 aa12.17□□□□□ -0.46
GPCPD1-203ENST00000462080 ADD1P35611 737 aaKnown RBP12.16□□□□□ -0.46
GPCPD1-203ENST00000462080 BANK1Q8NDB2 785 aa12.15□□□□□ -0.46
GPCPD1-203ENST00000462080 TPRNQ4KMQ1 711 aa12.14□□□□□ -0.47
GPCPD1-203ENST00000462080 CCDC155Q8N6L0 562 aa12.14□□□□□ -0.47
GPCPD1-203ENST00000462080 RNF217Q8TC41 542 aa12.14□□□□□ -0.47
GPCPD1-203ENST00000462080 SOCS7O14512 581 aa12.13□□□□□ -0.47
GPCPD1-203ENST00000462080 GIGYF1O75420 1035 aaPredicted RBP12.13□□□□□ -0.47
GPCPD1-203ENST00000462080 KDF1Q8NAX2 398 aaPredicted RBP12.13□□□□□ -0.47
GPCPD1-203ENST00000462080 TRIM52Q96A61 297 aa12.13□□□□□ -0.47
GPCPD1-203ENST00000462080 CYLDQ9NQC7 956 aa12.13□□□□□ -0.47
GPCPD1-203ENST00000462080 SLC35F4A4IF30 521 aa12.12□□□□□ -0.47
GPCPD1-203ENST00000462080 PTGIRP43119 386 aa12.12□□□□□ -0.47
GPCPD1-203ENST00000462080 MTMR14Q8NCE2 650 aa12.11□□□□□ -0.47
GPCPD1-203ENST00000462080 NR1H3Q13133 447 aa12.1□□□□□ -0.47
GPCPD1-203ENST00000462080 NANOS1Q8WY41 292 aaKnown RBP12.1□□□□□ -0.47
GPCPD1-203ENST00000462080 NDUFB9Q9Y6M9 179 aa12.1□□□□□ -0.47
GPCPD1-203ENST00000462080 FOXD4L5Q5VV16 416 aaPredicted RBP12.09□□□□□ -0.47
GPCPD1-203ENST00000462080 GPR161Q8N6U8 529 aaKnown RBP12.09□□□□□ -0.47
GPCPD1-203ENST00000462080 GPR37L1O60883 481 aa12.08□□□□□ -0.48
GPCPD1-203ENST00000462080 CCDC125Q86Z20 511 aa12.08□□□□□ -0.48
GPCPD1-203ENST00000462080 APBB1O00213 710 aa12.07□□□□□ -0.48
GPCPD1-203ENST00000462080 ITGA6P23229 1130 aa12.07□□□□□ -0.48
GPCPD1-203ENST00000462080 MCCD1P59942 119 aaPredicted RBP12.07□□□□□ -0.48
GPCPD1-203ENST00000462080 KRT76Q01546 638 aa12.07□□□□□ -0.48
GPCPD1-203ENST00000462080 RNF20Q5VTR2 975 aa12.07□□□□□ -0.48
GPCPD1-203ENST00000462080 ZNF592Q92610 1267 aa12.07□□□□□ -0.48
GPCPD1-203ENST00000462080 SNRKQ9NRH2 765 aa12.07□□□□□ -0.48
GPCPD1-203ENST00000462080 ZNF330Q9Y3S2 320 aaPredicted RBP12.07□□□□□ -0.48
GPCPD1-203ENST00000462080 SENP3-EIF4A1A0A087X0R7 540 aa12.05□□□□□ -0.48
GPCPD1-203ENST00000462080 ATP5J2-PTCD1G3V325 749 aa12.05□□□□□ -0.48
GPCPD1-203ENST00000462080 ERVK-9P63128 1117 aa12.04□□□□□ -0.48
GPCPD1-203ENST00000462080 LYSMD3Q7Z3D4 306 aa12.04□□□□□ -0.48
GPCPD1-203ENST00000462080 CNTNAP3BQ96NU0 1288 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms