RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 OVOS2A0A0J9YW53 1432 aa7.87□□□□□ -1.15
CLK1-207ENST00000461981 OVOS2Q6IE36 1432 aa7.87□□□□□ -1.15
CLK1-207ENST00000461981 USP31Q70CQ4 1352 aa7.86□□□□□ -1.15
CLK1-207ENST00000461981 CCDC7Q96M83 1385 aa7.86□□□□□ -1.15
CLK1-207ENST00000461981 CRB1P82279 1406 aa7.86□□□□□ -1.15
CLK1-207ENST00000461981 TTC21AQ8NDW8 1320 aa7.86□□□□□ -1.15
CLK1-207ENST00000461981 PLSCR1O15162 318 aa7.86□□□□□ -1.15
CLK1-207ENST00000461981 IPO9Q96P70 1041 aaKnown RBP7.86□□□□□ -1.15
CLK1-207ENST00000461981 CAMKK2Q96RR4 588 aa7.85□□□□□ -1.15
CLK1-207ENST00000461981 COL5A2P05997 1499 aaPredicted RBP7.85□□□□□ -1.15
CLK1-207ENST00000461981 NBPF8Q3BBV2 869 aa7.85□□□□□ -1.15
CLK1-207ENST00000461981 NBPF14Q5TI25 921 aa7.85□□□□□ -1.15
CLK1-207ENST00000461981 PIK3C2AO00443 1686 aa7.85□□□□□ -1.15
CLK1-207ENST00000461981 FOXO3O43524 673 aa7.84□□□□□ -1.15
CLK1-207ENST00000461981 ZNF831Q5JPB2 1677 aa7.84□□□□□ -1.15
CLK1-207ENST00000461981 NFAT5O94916 1531 aa7.84□□□□□ -1.15
CLK1-207ENST00000461981 CHMP4BQ9H444 224 aaKnown RBP7.83□□□□□ -1.16
CLK1-207ENST00000461981 FAM43AQ8N2R8 423 aa7.83□□□□□ -1.16
CLK1-207ENST00000461981 FAM83GA6ND36 823 aa7.83□□□□□ -1.16
CLK1-207ENST00000461981 RGS3P49796 1198 aa7.83□□□□□ -1.16
CLK1-207ENST00000461981 NAP1L5Q96NT1 182 aaPredicted RBP7.83□□□□□ -1.16
CLK1-207ENST00000461981 RRP9O43818 475 aaKnown RBP7.82□□□□□ -1.16
CLK1-207ENST00000461981 PRAM1Q96QH2 718 aa7.82□□□□□ -1.16
CLK1-207ENST00000461981 POGKQ9P215 609 aa7.82□□□□□ -1.16
CLK1-207ENST00000461981 USP6P35125 1406 aa7.82□□□□□ -1.16
CLK1-207ENST00000461981 ZNF692Q9BU19 519 aaPredicted RBP7.82□□□□□ -1.16
CLK1-207ENST00000461981 CCDC61Q9Y6R9 512 aa7.82□□□□□ -1.16
CLK1-207ENST00000461981 TNS2Q63HR2 1409 aa7.82□□□□□ -1.16
CLK1-207ENST00000461981 PRR36Q9H6K5 1346 aa7.82□□□□□ -1.16
CLK1-207ENST00000461981 DCAF8L1A6NGE4 600 aa7.81□□□□□ -1.16
CLK1-207ENST00000461981 HSP90AA1P07900 732 aaKnown RBP7.81□□□□□ -1.16
CLK1-207ENST00000461981 GSE1Q14687 1217 aa7.81□□□□□ -1.16
CLK1-207ENST00000461981 B4GALNT3Q6L9W6 998 aa7.81□□□□□ -1.16
CLK1-207ENST00000461981 NAP1L2Q9ULW6 460 aaPredicted RBP7.81□□□□□ -1.16
CLK1-207ENST00000461981 NLRP13Q86W25 1043 aa7.81□□□□□ -1.16
CLK1-207ENST00000461981 BBXQ8WY36 941 aaPredicted RBP7.81□□□□□ -1.16
CLK1-207ENST00000461981 CPSF1Q10570 1443 aaKnown RBP7.81□□□□□ -1.16
CLK1-207ENST00000461981 WAPLQ7Z5K2 1190 aa7.81□□□□□ -1.16
CLK1-207ENST00000461981 TCP11L2Q8N4U5 519 aa7.81□□□□□ -1.16
CLK1-207ENST00000461981 KCNH5Q8NCM2 988 aa7.81□□□□□ -1.16
CLK1-207ENST00000461981 CHD4Q14839 1912 aa7.81□□□□□ -1.16
CLK1-207ENST00000461981 LY75O60449 1722 aa7.81□□□□□ -1.16
CLK1-207ENST00000461981 HAP1P54257 671 aaPredicted RBP7.8□□□□□ -1.16
CLK1-207ENST00000461981 DDX17Q92841 729 aaKnown RBP7.8□□□□□ -1.16
CLK1-207ENST00000461981 KIF24Q5T7B8 1368 aa7.8□□□□□ -1.16
CLK1-207ENST00000461981 RAB3GAP2Q9H2M9 1393 aa7.8□□□□□ -1.16
CLK1-207ENST00000461981 NCBP3Q53F19 620 aaKnown RBP7.8□□□□□ -1.16
CLK1-207ENST00000461981 NPM2Q86SE8 214 aaKnown RBP7.8□□□□□ -1.16
CLK1-207ENST00000461981 DHX37Q8IY37 1157 aaKnown RBP7.8□□□□□ -1.16
CLK1-207ENST00000461981 CICQ96RK0 1608 aaPredicted RBP7.8□□□□□ -1.16
CLK1-207ENST00000461981 CFAP70Q5T0N1 1121 aa7.79□□□□□ -1.16
CLK1-207ENST00000461981 NUDT16Q96DE0 195 aaKnown RBP7.79□□□□□ -1.16
CLK1-207ENST00000461981 FRAT1Q92837 279 aaPredicted RBP7.79□□□□□ -1.16
CLK1-207ENST00000461981 USP35Q9P2H5 1018 aa7.79□□□□□ -1.16
CLK1-207ENST00000461981 SLC16A10Q8TF71 515 aa7.78□□□□□ -1.16
CLK1-207ENST00000461981 KIAA0232Q92628 1395 aa7.78□□□□□ -1.16
CLK1-207ENST00000461981 NSD2O96028 1365 aa7.78□□□□□ -1.16
CLK1-207ENST00000461981 PRDM11Q9NQV5 511 aa7.78□□□□□ -1.16
CLK1-207ENST00000461981 BTG4Q9NY30 223 aa7.78□□□□□ -1.16
CLK1-207ENST00000461981 PPIP5K1Q6PFW1 1433 aa7.78□□□□□ -1.16
CLK1-207ENST00000461981 RTL1A6NKG5 1358 aa7.78□□□□□ -1.16
CLK1-207ENST00000461981 KCNQ2O43526 872 aa7.77□□□□□ -1.16
CLK1-207ENST00000461981 CARD10Q9BWT7 1032 aa7.77□□□□□ -1.17
CLK1-207ENST00000461981 SENP3Q9H4L4 574 aaPredicted RBP7.77□□□□□ -1.17
CLK1-207ENST00000461981 SPON1Q9HCB6 807 aa7.77□□□□□ -1.17
CLK1-207ENST00000461981 NSD3Q9BZ95 1437 aa7.77□□□□□ -1.17
CLK1-207ENST00000461981 WDR17Q8IZU2 1322 aa7.77□□□□□ -1.17
CLK1-207ENST00000461981 PPP4R2Q9NY27 417 aa7.77□□□□□ -1.17
CLK1-207ENST00000461981 NGDNQ8NEJ9 315 aaKnown RBP7.76□□□□□ -1.17
CLK1-207ENST00000461981 MYOM1P52179 1685 aa7.76□□□□□ -1.17
CLK1-207ENST00000461981 CENPJQ9HC77 1338 aaPredicted RBP7.76□□□□□ -1.17
CLK1-207ENST00000461981 ANKRD26Q9UPS8 1709 aa7.76□□□□□ -1.17
CLK1-207ENST00000461981 PRDM4Q9UKN5 801 aa7.76□□□□□ -1.17
CLK1-207ENST00000461981 DCAF11Q8TEB1 546 aa7.75□□□□□ -1.17
CLK1-207ENST00000461981 RRAGDQ9NQL2 400 aaPredicted RBP7.75□□□□□ -1.17
CLK1-207ENST00000461981 CGNL1Q0VF96 1302 aa7.75□□□□□ -1.17
CLK1-207ENST00000461981 EVC2Q86UK5 1308 aa7.75□□□□□ -1.17
CLK1-207ENST00000461981 STK26Q9P289 416 aa7.75□□□□□ -1.17
CLK1-207ENST00000461981 EDC4Q6P2E9 1401 aaKnown RBP7.75□□□□□ -1.17
CLK1-207ENST00000461981 TMEM132EQ6IEE7 984 aa7.75□□□□□ -1.17
CLK1-207ENST00000461981 ACEP12821 1306 aa7.74□□□□□ -1.17
CLK1-207ENST00000461981 PDE3BQ13370 1112 aa7.74□□□□□ -1.17
CLK1-207ENST00000461981 LTN1O94822 1766 aa7.74□□□□□ -1.17
CLK1-207ENST00000461981 NCAPD2Q15021 1401 aa7.74□□□□□ -1.17
CLK1-207ENST00000461981 GTF2E1P29083 439 aaPredicted RBP7.74□□□□□ -1.17
CLK1-207ENST00000461981 CDK19Q9BWU1 502 aa7.74□□□□□ -1.17
CLK1-207ENST00000461981 BTAF1O14981 1849 aa7.73□□□□□ -1.17
CLK1-207ENST00000461981 FAM98CQ17RN3 349 aaKnown RBP7.73□□□□□ -1.17
CLK1-207ENST00000461981 PKD1L3Q7Z443 1732 aa7.73□□□□□ -1.17
CLK1-207ENST00000461981 SLC27A3Q5K4L6 730 aa7.73□□□□□ -1.17
CLK1-207ENST00000461981 DDX10Q13206 875 aaKnown RBP7.73□□□□□ -1.17
CLK1-207ENST00000461981 SHANK3Q9BYB0 1731 aa7.73□□□□□ -1.17
CLK1-207ENST00000461981 DEFB132Q7Z7B7 95 aa7.72□□□□□ -1.17
CLK1-207ENST00000461981 ARHGEF25Q86VW2 580 aa7.72□□□□□ -1.17
CLK1-207ENST00000461981 PPM1GO15355 546 aaPredicted RBP7.71□□□□□ -1.17
CLK1-207ENST00000461981 CANXP27824 592 aaKnown RBP7.71□□□□□ -1.17
CLK1-207ENST00000461981 C10orf71Q711Q0 1435 aa7.71□□□□□ -1.18
CLK1-207ENST00000461981 GCP02774 474 aa7.71□□□□□ -1.18
CLK1-207ENST00000461981 PNNQ9H307 717 aaKnown RBP7.71□□□□□ -1.18
CLK1-207ENST00000461981 CCDC9Q9Y3X0 531 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms