RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 MINK1Q8N4C8 1332 aaPredicted RBP9.55□□□□□ -0.88
CCT4-203ENST00000461540 SH3RF1Q7Z6J0 888 aa9.54□□□□□ -0.88
CCT4-203ENST00000461540 MAP10Q9P2G4 905 aa9.54□□□□□ -0.88
CCT4-203ENST00000461540 MOXD2PA6NHM9 499 aa9.53□□□□□ -0.88
CCT4-203ENST00000461540 MAP4K5Q9Y4K4 846 aa9.53□□□□□ -0.88
CCT4-203ENST00000461540 CCDC102AQ96A19 550 aa9.51□□□□□ -0.89
CCT4-203ENST00000461540 F12P00748 615 aaPredicted RBP9.5□□□□□ -0.89
CCT4-203ENST00000461540 NEDD1Q8NHV4 660 aa9.5□□□□□ -0.89
CCT4-203ENST00000461540 PGPEP1Q9NXJ5 209 aa9.5□□□□□ -0.89
CCT4-203ENST00000461540 CBLBQ13191 982 aa9.49□□□□□ -0.89
CCT4-203ENST00000461540 Q6ZVU0 165 aa9.49□□□□□ -0.89
CCT4-203ENST00000461540 KRTAP1-3Q8IUG1 177 aa9.49□□□□□ -0.89
CCT4-203ENST00000461540 C1QTNF2Q9BXJ5 285 aa9.49□□□□□ -0.89
CCT4-203ENST00000461540 BAG6P46379 1132 aa9.48□□□□□ -0.89
CCT4-203ENST00000461540 SSTR3P32745 418 aaPredicted RBP9.46□□□□□ -0.9
CCT4-203ENST00000461540 GAS6Q14393 721 aa9.46□□□□□ -0.9
CCT4-203ENST00000461540 PPP1R26Q5T8A7 1209 aaPredicted RBP9.46□□□□□ -0.9
CCT4-203ENST00000461540 TRMT44Q8IYL2 757 aaKnown RBP9.46□□□□□ -0.9
CCT4-203ENST00000461540 CTSOP43234 321 aaPredicted RBP9.45□□□□□ -0.9
CCT4-203ENST00000461540 ARMC2Q8NEN0 867 aa9.45□□□□□ -0.9
CCT4-203ENST00000461540 MAGEB6P1A0A0J9YX57 407 aa9.44□□□□□ -0.9
CCT4-203ENST00000461540 CFAP99D6REC4 459 aa9.44□□□□□ -0.9
CCT4-203ENST00000461540 POLMQ9NP87 494 aaPredicted RBP9.44□□□□□ -0.9
CCT4-203ENST00000461540 SENP3-EIF4A1A0A087X0R7 540 aa9.43□□□□□ -0.9
CCT4-203ENST00000461540 FURINP09958 794 aa9.43□□□□□ -0.9
CCT4-203ENST00000461540 BCRP11274 1271 aa9.43□□□□□ -0.9
CCT4-203ENST00000461540 NBPF14Q5TI25 921 aa9.43□□□□□ -0.9
CCT4-203ENST00000461540 INSM2Q96T92 566 aaPredicted RBP9.43□□□□□ -0.9
CCT4-203ENST00000461540 MBIPQ9NS73 344 aa9.43□□□□□ -0.9
CCT4-203ENST00000461540 RELBQ01201 579 aa9.41□□□□□ -0.9
CCT4-203ENST00000461540 IGF1RP08069 1367 aa9.4□□□□□ -0.9
CCT4-203ENST00000461540 GJA5P36382 358 aa9.4□□□□□ -0.9
CCT4-203ENST00000461540 RNF217Q8TC41 542 aa9.4□□□□□ -0.9
CCT4-203ENST00000461540 AGBL1Q96MI9 1066 aa9.4□□□□□ -0.9
CCT4-203ENST00000461540 ZBTB3Q9H5J0 574 aa9.39□□□□□ -0.91
CCT4-203ENST00000461540 FOXR1Q6PIV2 292 aa9.38□□□□□ -0.91
CCT4-203ENST00000461540 SH3BP5LQ7L8J4 393 aa9.38□□□□□ -0.91
CCT4-203ENST00000461540 CARD14Q9BXL6 1004 aa9.38□□□□□ -0.91
CCT4-203ENST00000461540 CUEDC1Q9NWM3 386 aaPredicted RBP9.38□□□□□ -0.91
CCT4-203ENST00000461540 PER1O15534 1290 aaPredicted RBP9.37□□□□□ -0.91
CCT4-203ENST00000461540 DHX9Q08211 1270 aaKnown RBP9.37□□□□□ -0.91
CCT4-203ENST00000461540 KRBA1A5PL33 1030 aa9.36□□□□□ -0.91
CCT4-203ENST00000461540 HRCP23327 699 aa9.36□□□□□ -0.91
CCT4-203ENST00000461540 RSBN1LQ6PCB5 846 aaPredicted RBP9.36□□□□□ -0.91
CCT4-203ENST00000461540 PCDHB15Q9Y5E8 787 aa9.36□□□□□ -0.91
CCT4-203ENST00000461540 TULP1O00294 542 aaPredicted RBP9.35□□□□□ -0.91
CCT4-203ENST00000461540 ERFEQ4G0M1 354 aa9.35□□□□□ -0.91
CCT4-203ENST00000461540 LCE3BQ5TA77 95 aa9.35□□□□□ -0.91
CCT4-203ENST00000461540 ACDQ96AP0 544 aa9.35□□□□□ -0.91
CCT4-203ENST00000461540 ZNF395Q9H8N7 513 aaPredicted RBP9.35□□□□□ -0.91
CCT4-203ENST00000461540 LRRC4BQ9NT99 713 aa9.35□□□□□ -0.91
CCT4-203ENST00000461540 DIXDC1Q155Q3 683 aa9.34□□□□□ -0.91
CCT4-203ENST00000461540 ALYREFQ86V81 257 aaKnown RBP9.34□□□□□ -0.91
CCT4-203ENST00000461540 TSC1Q92574 1164 aa9.34□□□□□ -0.91
CCT4-203ENST00000461540 GMCL1Q96IK5 515 aa9.34□□□□□ -0.91
CCT4-203ENST00000461540 GPR25O00155 361 aa9.33□□□□□ -0.92
CCT4-203ENST00000461540 ZNF837Q96EG3 531 aaPredicted RBP9.33□□□□□ -0.92
CCT4-203ENST00000461540 TBC1D2Q9BYX2 928 aa9.33□□□□□ -0.92
CCT4-203ENST00000461540 TTLL12Q14166 644 aaPredicted RBP9.32□□□□□ -0.92
CCT4-203ENST00000461540 LYSMD3Q7Z3D4 306 aa9.32□□□□□ -0.92
CCT4-203ENST00000461540 KCTD15Q96SI1 283 aaPredicted RBP9.32□□□□□ -0.92
CCT4-203ENST00000461540 BEGAINQ9BUH8 593 aa9.32□□□□□ -0.92
CCT4-203ENST00000461540 PRPF38BQ5VTL8 546 aaKnown RBP9.31□□□□□ -0.92
CCT4-203ENST00000461540 TRIM22Q8IYM9 498 aa9.31□□□□□ -0.92
CCT4-203ENST00000461540 CDV3Q9UKY7 258 aaKnown RBP9.31□□□□□ -0.92
CCT4-203ENST00000461540 GPKOWQ92917 476 aaPredicted RBP eCLIP9.3□□□□□ -0.92
CCT4-203ENST00000461540 MKL2Q9ULH7 1088 aa9.3□□□□□ -0.92
CCT4-203ENST00000461540 OIP5O43482 229 aa9.29□□□□□ -0.92
CCT4-203ENST00000461540 SNRPNP63162 240 aaKnown RBP9.29□□□□□ -0.92
CCT4-203ENST00000461540 FOXD4L5Q5VV16 416 aaPredicted RBP9.29□□□□□ -0.92
CCT4-203ENST00000461540 CABLES1Q8TDN4 633 aa9.29□□□□□ -0.92
CCT4-203ENST00000461540 SLC10A4Q96EP9 437 aa9.29□□□□□ -0.92
CCT4-203ENST00000461540 TRERF1Q96PN7 1200 aa9.29□□□□□ -0.92
CCT4-203ENST00000461540 NSFL1CQ9UNZ2 370 aaKnown RBP9.29□□□□□ -0.92
CCT4-203ENST00000461540 RIPOR1Q6ZS17 1223 aa9.27□□□□□ -0.93
CCT4-203ENST00000461540 MX2P20592 715 aa9.26□□□□□ -0.93
CCT4-203ENST00000461540 CSPP1Q1MSJ5 1256 aa9.26□□□□□ -0.93
CCT4-203ENST00000461540 INTS6LQ5JSJ4 861 aaKnown RBP9.26□□□□□ -0.93
CCT4-203ENST00000461540 PRICKLE2Q7Z3G6 844 aa9.26□□□□□ -0.93
CCT4-203ENST00000461540 H7C1W4 665 aa9.25□□□□□ -0.93
CCT4-203ENST00000461540 ADH1AP07327 375 aa9.25□□□□□ -0.93
CCT4-203ENST00000461540 RHOQP17081 205 aa9.25□□□□□ -0.93
CCT4-203ENST00000461540 DBN1Q16643 649 aa9.25□□□□□ -0.93
CCT4-203ENST00000461540 GIGYF2Q6Y7W6 1299 aaKnown RBP9.25□□□□□ -0.93
CCT4-203ENST00000461540 GTPBP3Q969Y2 492 aaKnown RBP9.25□□□□□ -0.93
CCT4-203ENST00000461540 KRTAP4-12Q9BQ66 201 aa9.25□□□□□ -0.93
CCT4-203ENST00000461540 NUTM2BA6NNL0 878 aaPredicted RBP9.24□□□□□ -0.93
CCT4-203ENST00000461540 NUTM2EB1AL46 878 aaPredicted RBP9.24□□□□□ -0.93
CCT4-203ENST00000461540 COL8A1P27658 744 aa9.24□□□□□ -0.93
CCT4-203ENST00000461540 ZMYM1Q5SVZ6 1142 aa9.24□□□□□ -0.93
CCT4-203ENST00000461540 NUTM2DQ5VT03 806 aaPredicted RBP9.24□□□□□ -0.93
CCT4-203ENST00000461540 RIC3Q7Z5B4 369 aa9.24□□□□□ -0.93
CCT4-203ENST00000461540 NUTM2AQ8IVF1 878 aaPredicted RBP9.24□□□□□ -0.93
CCT4-203ENST00000461540 ARHGAP9Q9BRR9 750 aa9.24□□□□□ -0.93
CCT4-203ENST00000461540 RRAGCQ9HB90 399 aa9.24□□□□□ -0.93
CCT4-203ENST00000461540 BTBD11A6QL63 1104 aa9.23□□□□□ -0.93
CCT4-203ENST00000461540 PTGIRP43119 386 aa9.23□□□□□ -0.93
CCT4-203ENST00000461540 GRIN2CQ14957 1233 aa9.22□□□□□ -0.93
CCT4-203ENST00000461540 HELBQ8NG08 1087 aaPredicted RBP9.22□□□□□ -0.93
CCT4-203ENST00000461540 OXCT2Q9BYC2 517 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms