RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 CCDC125Q86Z20 511 aa14.05□□□□□ -0.16
SYN3-206ENST00000461446 TCP11L2Q8N4U5 519 aa14.05□□□□□ -0.16
SYN3-206ENST00000461446 USP31Q70CQ4 1352 aa14.05□□□□□ -0.16
SYN3-206ENST00000461446 EDC4Q6P2E9 1401 aaKnown RBP14.05□□□□□ -0.16
SYN3-206ENST00000461446 COL18A1P39060 1754 aa14.04□□□□□ -0.16
SYN3-206ENST00000461446 BARGINQ6ZT62 677 aa14.04□□□□□ -0.16
SYN3-206ENST00000461446 DEFB132Q7Z7B7 95 aa14.04□□□□□ -0.16
SYN3-206ENST00000461446 BLMP54132 1417 aaPredicted RBP14.04□□□□□ -0.16
SYN3-206ENST00000461446 NFAT5O94916 1531 aa14.04□□□□□ -0.16
SYN3-206ENST00000461446 WASHC2AQ641Q2 1341 aa14.03□□□□□ -0.16
SYN3-206ENST00000461446 CCDC7Q96M83 1385 aa14.03□□□□□ -0.16
SYN3-206ENST00000461446 CRB1P82279 1406 aa14.02□□□□□ -0.16
SYN3-206ENST00000461446 ANKRD36BQ8N2N9 1353 aa14.02□□□□□ -0.17
SYN3-206ENST00000461446 TOM1L2Q6ZVM7 507 aa14.02□□□□□ -0.17
SYN3-206ENST00000461446 RGPD5Q99666 1765 aa14.01□□□□□ -0.17
SYN3-206ENST00000461446 WDR17Q8IZU2 1322 aa14□□□□□ -0.17
SYN3-206ENST00000461446 CSB-PGBD3P0DP91 1061 aa14□□□□□ -0.17
SYN3-206ENST00000461446 FBLN1P23142 703 aa14□□□□□ -0.17
SYN3-206ENST00000461446 PDE3BQ13370 1112 aa14□□□□□ -0.17
SYN3-206ENST00000461446 SF3B2Q13435 895 aaKnown RBP14□□□□□ -0.17
SYN3-206ENST00000461446 THRAP3Q9Y2W1 955 aaKnown RBP14□□□□□ -0.17
SYN3-206ENST00000461446 MYOM1P52179 1685 aa14□□□□□ -0.17
SYN3-206ENST00000461446 OVOS2A0A0J9YW53 1432 aa13.99□□□□□ -0.17
SYN3-206ENST00000461446 OVOS2Q6IE36 1432 aa13.99□□□□□ -0.17
SYN3-206ENST00000461446 CARD14Q9BXL6 1004 aa13.99□□□□□ -0.17
SYN3-206ENST00000461446 PANK3Q9H999 370 aa13.99□□□□□ -0.17
SYN3-206ENST00000461446 USP54Q70EL1 1684 aa13.98□□□□□ -0.17
SYN3-206ENST00000461446 FYB1O15117 783 aa13.97□□□□□ -0.17
SYN3-206ENST00000461446 TRIM37O94972 964 aa13.97□□□□□ -0.17
SYN3-206ENST00000461446 FAM196AQ6ZSG2 479 aa13.97□□□□□ -0.17
SYN3-206ENST00000461446 COG3Q96JB2 828 aa13.97□□□□□ -0.17
SYN3-206ENST00000461446 CARD10Q9BWT7 1032 aa13.97□□□□□ -0.17
SYN3-206ENST00000461446 GGNBP2Q9H3C7 697 aa13.97□□□□□ -0.17
SYN3-206ENST00000461446 LTN1O94822 1766 aa13.96□□□□□ -0.18
SYN3-206ENST00000461446 EN1Q05925 392 aaPredicted RBP13.95□□□□□ -0.18
SYN3-206ENST00000461446 NLRP2Q9NX02 1062 aa13.95□□□□□ -0.18
SYN3-206ENST00000461446 ERBB3P21860 1342 aa13.94□□□□□ -0.18
SYN3-206ENST00000461446 MAP3K19Q56UN5 1328 aa13.94□□□□□ -0.18
SYN3-206ENST00000461446 BAG6P46379 1132 aa13.94□□□□□ -0.18
SYN3-206ENST00000461446 DDB1Q16531 1140 aa13.94□□□□□ -0.18
SYN3-206ENST00000461446 ANKRD24Q8TF21 1146 aa13.94□□□□□ -0.18
SYN3-206ENST00000461446 LTV1Q96GA3 475 aaPredicted RBP13.94□□□□□ -0.18
SYN3-206ENST00000461446 NSD3Q9BZ95 1437 aa13.94□□□□□ -0.18
SYN3-206ENST00000461446 PARP4Q9UKK3 1724 aaKnown RBP13.93□□□□□ -0.18
SYN3-206ENST00000461446 PER1O15534 1290 aaPredicted RBP13.93□□□□□ -0.18
SYN3-206ENST00000461446 RRS1Q15050 365 aaKnown RBP13.93□□□□□ -0.18
SYN3-206ENST00000461446 IP6K1Q92551 441 aa13.93□□□□□ -0.18
SYN3-206ENST00000461446 ABCC6O95255 1503 aa13.93□□□□□ -0.18
SYN3-206ENST00000461446 ZNF316A6NFI3 1004 aaPredicted RBP13.92□□□□□ -0.18
SYN3-206ENST00000461446 LRRC37A3O60309 1634 aa13.92□□□□□ -0.18
SYN3-206ENST00000461446 DISP2A7MBM2 1401 aa13.91□□□□□ -0.18
SYN3-206ENST00000461446 RGPD1P0DJD0 1748 aa13.91□□□□□ -0.18
SYN3-206ENST00000461446 APBA3O96018 575 aa13.91□□□□□ -0.18
SYN3-206ENST00000461446 AMPHP49418 695 aa13.91□□□□□ -0.18
SYN3-206ENST00000461446 EZH2Q15910 746 aaKnown RBP13.91□□□□□ -0.18
SYN3-206ENST00000461446 MARCH10Q8NA82 808 aaPredicted RBP13.91□□□□□ -0.18
SYN3-206ENST00000461446 CDCA7Q9BWT1 371 aaPredicted RBP13.91□□□□□ -0.18
SYN3-206ENST00000461446 KNSTRNQ9Y448 316 aa13.91□□□□□ -0.18
SYN3-206ENST00000461446 CGNL1Q0VF96 1302 aa13.9□□□□□ -0.18
SYN3-206ENST00000461446 TNS1Q9HBL0 1735 aaKnown RBP13.9□□□□□ -0.18
SYN3-206ENST00000461446 HOXC9P31274 260 aa13.9□□□□□ -0.18
SYN3-206ENST00000461446 PTF1AQ7RTS3 328 aa13.9□□□□□ -0.18
SYN3-206ENST00000461446 WNK3Q9BYP7 1800 aa13.9□□□□□ -0.18
SYN3-206ENST00000461446 EXOC5O00471 708 aa13.89□□□□□ -0.19
SYN3-206ENST00000461446 CAMKK2Q96RR4 588 aa13.89□□□□□ -0.19
SYN3-206ENST00000461446 PEAK1Q9H792 1746 aa13.88□□□□□ -0.19
SYN3-206ENST00000461446 DDX10Q13206 875 aaKnown RBP13.88□□□□□ -0.19
SYN3-206ENST00000461446 AMER1Q5JTC6 1135 aaPredicted RBP13.88□□□□□ -0.19
SYN3-206ENST00000461446 OVOS2A0A0G2JMS6 1433 aa13.88□□□□□ -0.19
SYN3-206ENST00000461446 KIF20BQ96Q89 1820 aa13.87□□□□□ -0.19
SYN3-206ENST00000461446 PSDA5PKW4 1024 aaPredicted RBP13.87□□□□□ -0.19
SYN3-206ENST00000461446 IL2RBP14784 551 aa13.87□□□□□ -0.19
SYN3-206ENST00000461446 NSD2O96028 1365 aa13.85□□□□□ -0.19
SYN3-206ENST00000461446 HSP90AB2PQ58FF8 381 aa13.85□□□□□ -0.19
SYN3-206ENST00000461446 EMILIN1Q9Y6C2 1016 aa13.85□□□□□ -0.19
SYN3-206ENST00000461446 RGPD2P0DJD1 1756 aa13.84□□□□□ -0.19
SYN3-206ENST00000461446 TNS2Q63HR2 1409 aa13.84□□□□□ -0.19
SYN3-206ENST00000461446 PPM1GO15355 546 aaPredicted RBP13.84□□□□□ -0.19
SYN3-206ENST00000461446 NBPF6Q5VWK0 638 aa13.84□□□□□ -0.19
SYN3-206ENST00000461446 USHBP1Q8N6Y0 703 aa13.84□□□□□ -0.19
SYN3-206ENST00000461446 NBPF4Q96M43 638 aa13.84□□□□□ -0.19
SYN3-206ENST00000461446 SBF2Q86WG5 1849 aa13.84□□□□□ -0.19
SYN3-206ENST00000461446 RTL1A6NKG5 1358 aa13.83□□□□□ -0.19
SYN3-206ENST00000461446 NPC1L1Q9UHC9 1359 aa13.83□□□□□ -0.19
SYN3-206ENST00000461446 KCNQ2O43526 872 aa13.83□□□□□ -0.2
SYN3-206ENST00000461446 TNNT2P45379 298 aaPredicted RBP13.83□□□□□ -0.2
SYN3-206ENST00000461446 R3HDM1Q15032 1099 aaKnown RBP13.83□□□□□ -0.2
SYN3-206ENST00000461446 BCL11BQ9C0K0 894 aaPredicted RBP13.83□□□□□ -0.2
SYN3-206ENST00000461446 CC2D1BQ5T0F9 858 aaKnown RBP13.82□□□□□ -0.2
SYN3-206ENST00000461446 MORC1Q86VD1 984 aa13.82□□□□□ -0.2
SYN3-206ENST00000461446 DDX54Q8TDD1 881 aaKnown RBP13.82□□□□□ -0.2
SYN3-206ENST00000461446 ACSBG1Q96GR2 724 aa13.82□□□□□ -0.2
SYN3-206ENST00000461446 SRCAPQ6ZRS2 3230 aa13.82□□□□□ -0.2
SYN3-206ENST00000461446 BCL9O00512 1426 aa13.81□□□□□ -0.2
SYN3-206ENST00000461446 INSRP06213 1382 aa13.81□□□□□ -0.2
SYN3-206ENST00000461446 FLT4P35916 1363 aa13.81□□□□□ -0.2
SYN3-206ENST00000461446 PARD3Q8TEW0 1356 aa13.81□□□□□ -0.2
SYN3-206ENST00000461446 FAM208AQ9UK61 1670 aaKnown RBP13.8□□□□□ -0.2
SYN3-206ENST00000461446 POLKQ9UBT6 870 aa13.8□□□□□ -0.2
SYN3-206ENST00000461446 MEGF6O75095 1541 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms