RNA–Protein interactions for RNA: ENST00000461294.2

PDGFRA-202, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 480 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-202ENST00000461294 POLD1P28340 1107 aa11.92□□□□□ -0.5
PDGFRA-202ENST00000461294 ZEB1P37275 1124 aaPredicted RBP11.92□□□□□ -0.5
PDGFRA-202ENST00000461294 JMYQ8N9B5 988 aa11.92□□□□□ -0.5
PDGFRA-202ENST00000461294 NLGN2Q8NFZ4 835 aa11.92□□□□□ -0.5
PDGFRA-202ENST00000461294 ZNF526Q8TF50 670 aaPredicted RBP11.92□□□□□ -0.5
PDGFRA-202ENST00000461294 SLC16A10Q8TF71 515 aa11.92□□□□□ -0.5
PDGFRA-202ENST00000461294 YTHDC2Q9H6S0 1430 aaKnown RBP11.92□□□□□ -0.5
PDGFRA-202ENST00000461294 ADCY9O60503 1353 aa11.92□□□□□ -0.5
PDGFRA-202ENST00000461294 AATKQ6ZMQ8 1374 aa11.92□□□□□ -0.5
PDGFRA-202ENST00000461294 KIF3CO14782 793 aa11.91□□□□□ -0.5
PDGFRA-202ENST00000461294 DDB1Q16531 1140 aa11.91□□□□□ -0.5
PDGFRA-202ENST00000461294 BCL9O00512 1426 aa11.91□□□□□ -0.5
PDGFRA-202ENST00000461294 COL24A1Q17RW2 1714 aa11.89□□□□□ -0.51
PDGFRA-202ENST00000461294 PIK3C2GO75747 1445 aa11.89□□□□□ -0.51
PDGFRA-202ENST00000461294 KLRG1Q96E93 195 aa11.89□□□□□ -0.51
PDGFRA-202ENST00000461294 C14orf93Q9H972 538 aaKnown RBP11.89□□□□□ -0.51
PDGFRA-202ENST00000461294 MARCH10Q8NA82 808 aaPredicted RBP11.88□□□□□ -0.51
PDGFRA-202ENST00000461294 NGDNQ8NEJ9 315 aaKnown RBP11.88□□□□□ -0.51
PDGFRA-202ENST00000461294 PHRF1Q9P1Y6 1649 aaKnown RBP11.88□□□□□ -0.51
PDGFRA-202ENST00000461294 WWC3Q9ULE0 1092 aa11.87□□□□□ -0.51
PDGFRA-202ENST00000461294 TOMM70O94826 608 aa11.86□□□□□ -0.51
PDGFRA-202ENST00000461294 SAFB2Q14151 953 aaKnown RBP eCLIP11.86□□□□□ -0.51
PDGFRA-202ENST00000461294 PRAM1Q96QH2 718 aa11.86□□□□□ -0.51
PDGFRA-202ENST00000461294 LMO7Q8WWI1 1683 aa11.86□□□□□ -0.51
PDGFRA-202ENST00000461294 PCNTO95613 3336 aa11.86□□□□□ -0.51
PDGFRA-202ENST00000461294 LRRC37A3O60309 1634 aa11.86□□□□□ -0.51
PDGFRA-202ENST00000461294 CRB1P82279 1406 aa11.86□□□□□ -0.51
PDGFRA-202ENST00000461294 CPDO75976 1380 aa11.85□□□□□ -0.51
PDGFRA-202ENST00000461294 CFAP70Q5T0N1 1121 aa11.85□□□□□ -0.51
PDGFRA-202ENST00000461294 WDR90Q96KV7 1748 aa11.85□□□□□ -0.51
PDGFRA-202ENST00000461294 AKAP12Q02952 1782 aa11.84□□□□□ -0.51
PDGFRA-202ENST00000461294 TOPAZ1Q8N9V7 1692 aa11.84□□□□□ -0.51
PDGFRA-202ENST00000461294 ZNF827Q17R98 1081 aa11.84□□□□□ -0.51
PDGFRA-202ENST00000461294 NUTM2GQ5VZR2 741 aa11.84□□□□□ -0.51
PDGFRA-202ENST00000461294 PAPPAQ13219 1627 aa11.84□□□□□ -0.51
PDGFRA-202ENST00000461294 PRR36Q9H6K5 1346 aa11.84□□□□□ -0.51
PDGFRA-202ENST00000461294 CDCA7Q9BWT1 371 aaPredicted RBP11.83□□□□□ -0.52
PDGFRA-202ENST00000461294 KAT6BQ8WYB5 2073 aa11.83□□□□□ -0.52
PDGFRA-202ENST00000461294 COL5A2P05997 1499 aaPredicted RBP11.83□□□□□ -0.52
PDGFRA-202ENST00000461294 EIF3AQ14152 1382 aaKnown RBP11.82□□□□□ -0.52
PDGFRA-202ENST00000461294 POGKQ9P215 609 aa11.82□□□□□ -0.52
PDGFRA-202ENST00000461294 QSER1Q2KHR3 1735 aa11.82□□□□□ -0.52
PDGFRA-202ENST00000461294 ROCK2O75116 1388 aaKnown RBP11.81□□□□□ -0.52
PDGFRA-202ENST00000461294 ARHGEF28Q8N1W1 1705 aaKnown RBP11.8□□□□□ -0.52
PDGFRA-202ENST00000461294 AKT1S1Q96B36 256 aa11.8□□□□□ -0.52
PDGFRA-202ENST00000461294 HTRA3P83110 453 aa11.79□□□□□ -0.52
PDGFRA-202ENST00000461294 NBPF1Q3BBV0 1214 aa11.79□□□□□ -0.52
PDGFRA-202ENST00000461294 TOM1L2Q6ZVM7 507 aa11.79□□□□□ -0.52
PDGFRA-202ENST00000461294 HIRIP3Q9BW71 556 aaPredicted RBP11.79□□□□□ -0.52
PDGFRA-202ENST00000461294 CARD11Q9BXL7 1154 aa11.79□□□□□ -0.52
PDGFRA-202ENST00000461294 LRRC4BQ9NT99 713 aa11.79□□□□□ -0.52
PDGFRA-202ENST00000461294 TULP4Q9NRJ4 1543 aa11.79□□□□□ -0.52
PDGFRA-202ENST00000461294 PNPLA7Q6ZV29 1317 aa11.79□□□□□ -0.52
PDGFRA-202ENST00000461294 WASLO00401 505 aaPredicted RBP11.78□□□□□ -0.52
PDGFRA-202ENST00000461294 EXOC5O00471 708 aa11.78□□□□□ -0.52
PDGFRA-202ENST00000461294 CD2APQ9Y5K6 639 aa11.78□□□□□ -0.52
PDGFRA-202ENST00000461294 GCP02774 474 aa11.77□□□□□ -0.53
PDGFRA-202ENST00000461294 ABTB2Q8N961 1025 aa11.77□□□□□ -0.53
PDGFRA-202ENST00000461294 RBM46Q8TBY0 533 aaKnown RBP11.77□□□□□ -0.53
PDGFRA-202ENST00000461294 USP19O94966 1318 aa11.77□□□□□ -0.53
PDGFRA-202ENST00000461294 WNK3Q9BYP7 1800 aa11.76□□□□□ -0.53
PDGFRA-202ENST00000461294 NHSQ6T4R5 1651 aa11.76□□□□□ -0.53
PDGFRA-202ENST00000461294 SLC24A1O60721 1099 aa11.76□□□□□ -0.53
PDGFRA-202ENST00000461294 TFCP2L1Q9NZI6 479 aa11.76□□□□□ -0.53
PDGFRA-202ENST00000461294 BRD4O60885 1362 aaPredicted RBP11.76□□□□□ -0.53
PDGFRA-202ENST00000461294 ADGRB1O14514 1584 aa11.75□□□□□ -0.53
PDGFRA-202ENST00000461294 NLRP13Q86W25 1043 aa11.75□□□□□ -0.53
PDGFRA-202ENST00000461294 TRAK1Q9UPV9 953 aa11.75□□□□□ -0.53
PDGFRA-202ENST00000461294 MINK1Q8N4C8 1332 aaPredicted RBP11.75□□□□□ -0.53
PDGFRA-202ENST00000461294 KIAA1210Q9ULL0 1709 aa11.74□□□□□ -0.53
PDGFRA-202ENST00000461294 HSPA1AP0DMV8 641 aaKnown RBP11.74□□□□□ -0.53
PDGFRA-202ENST00000461294 HSPA1BP0DMV9 641 aaKnown RBP11.74□□□□□ -0.53
PDGFRA-202ENST00000461294 FSTL1Q12841 308 aa11.74□□□□□ -0.53
PDGFRA-202ENST00000461294 SLC27A3Q5K4L6 730 aa11.74□□□□□ -0.53
PDGFRA-202ENST00000461294 ACSBG1Q96GR2 724 aa11.74□□□□□ -0.53
PDGFRA-202ENST00000461294 ITSN1Q15811 1721 aa11.74□□□□□ -0.53
PDGFRA-202ENST00000461294 BTAF1O14981 1849 aa11.74□□□□□ -0.53
PDGFRA-202ENST00000461294 USP6P35125 1406 aa11.73□□□□□ -0.53
PDGFRA-202ENST00000461294 EIF4G2P78344 907 aaKnown RBP eCLIP11.73□□□□□ -0.53
PDGFRA-202ENST00000461294 WDR17Q8IZU2 1322 aa11.73□□□□□ -0.53
PDGFRA-202ENST00000461294 NUDT16Q96DE0 195 aaKnown RBP11.73□□□□□ -0.53
PDGFRA-202ENST00000461294 TUBGCP6Q96RT7 1819 aa11.73□□□□□ -0.53
PDGFRA-202ENST00000461294 TRPM1Q7Z4N2 1603 aa11.71□□□□□ -0.53
PDGFRA-202ENST00000461294 POLR3AO14802 1390 aaPredicted RBP11.71□□□□□ -0.53
PDGFRA-202ENST00000461294 USP47Q96K76 1375 aa11.71□□□□□ -0.53
PDGFRA-202ENST00000461294 CENPJQ9HC77 1338 aaPredicted RBP11.71□□□□□ -0.53
PDGFRA-202ENST00000461294 CARD10Q9BWT7 1032 aa11.71□□□□□ -0.53
PDGFRA-202ENST00000461294 NMRK2Q9NPI5 230 aa11.71□□□□□ -0.53
PDGFRA-202ENST00000461294 ACEP12821 1306 aa11.7□□□□□ -0.54
PDGFRA-202ENST00000461294 ZBTB7CA1YPR0 619 aa11.7□□□□□ -0.54
PDGFRA-202ENST00000461294 C16orf71Q8IYS4 520 aaPredicted RBP11.7□□□□□ -0.54
PDGFRA-202ENST00000461294 AXIN2Q9Y2T1 843 aa11.69□□□□□ -0.54
PDGFRA-202ENST00000461294 COL18A1P39060 1754 aa11.69□□□□□ -0.54
PDGFRA-202ENST00000461294 SBNO2Q9Y2G9 1366 aa11.68□□□□□ -0.54
PDGFRA-202ENST00000461294 FAM161AQ3B820 660 aa11.68□□□□□ -0.54
PDGFRA-202ENST00000461294 COL23A1Q86Y22 540 aaPredicted RBP11.68□□□□□ -0.54
PDGFRA-202ENST00000461294 TNS2Q63HR2 1409 aa11.68□□□□□ -0.54
PDGFRA-202ENST00000461294 IGSF1Q8N6C5 1336 aa11.67□□□□□ -0.54
PDGFRA-202ENST00000461294 ST20-MTHFSA0A0A6YYL1 179 aa11.67□□□□□ -0.54
PDGFRA-202ENST00000461294 PLEKHG3A1L390 1219 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms