RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 ARHGEF12Q9NZN5 1544 aa12.45□□□□□ -0.42
ECHDC1-212ENST00000461239 CCNB3Q8WWL7 1395 aa12.44□□□□□ -0.42
ECHDC1-212ENST00000461239 GPR37L1O60883 481 aa12.44□□□□□ -0.42
ECHDC1-212ENST00000461239 RNF40O75150 1001 aa12.44□□□□□ -0.42
ECHDC1-212ENST00000461239 TRIM34Q9BYJ4 488 aa12.44□□□□□ -0.42
ECHDC1-212ENST00000461239 ADGRL1O94910 1474 aa12.44□□□□□ -0.42
ECHDC1-212ENST00000461239 SCAPERQ9BY12 1400 aa12.44□□□□□ -0.42
ECHDC1-212ENST00000461239 ZNF644Q9H582 1327 aaPredicted RBP12.43□□□□□ -0.42
ECHDC1-212ENST00000461239 HELBQ8NG08 1087 aaPredicted RBP12.43□□□□□ -0.42
ECHDC1-212ENST00000461239 NDUFB9Q9Y6M9 179 aa12.43□□□□□ -0.42
ECHDC1-212ENST00000461239 CFAP74Q9C0B2 1584 aa12.43□□□□□ -0.42
ECHDC1-212ENST00000461239 SUPT6HQ7KZ85 1726 aaKnown RBP12.42□□□□□ -0.42
ECHDC1-212ENST00000461239 DENND4BO75064 1496 aaPredicted RBP12.42□□□□□ -0.42
ECHDC1-212ENST00000461239 POM121CA8CG34 1229 aa12.42□□□□□ -0.42
ECHDC1-212ENST00000461239 C6orf229H3BNL8 230 aa12.42□□□□□ -0.42
ECHDC1-212ENST00000461239 IRF5Q13568 498 aa12.42□□□□□ -0.42
ECHDC1-212ENST00000461239 WWC1Q8IX03 1113 aa12.42□□□□□ -0.42
ECHDC1-212ENST00000461239 SAMD9LQ8IVG5 1584 aa12.42□□□□□ -0.42
ECHDC1-212ENST00000461239 KMT5BQ4FZB7 885 aa12.41□□□□□ -0.42
ECHDC1-212ENST00000461239 ADGRD1Q6QNK2 874 aa12.41□□□□□ -0.42
ECHDC1-212ENST00000461239 RICTORQ6R327 1708 aa12.41□□□□□ -0.42
ECHDC1-212ENST00000461239 MRPL50Q8N5N7 158 aaKnown RBP12.41□□□□□ -0.42
ECHDC1-212ENST00000461239 LRRN4Q8WUT4 740 aa12.41□□□□□ -0.42
ECHDC1-212ENST00000461239 SYMPKQ92797 1274 aaKnown RBP12.41□□□□□ -0.42
ECHDC1-212ENST00000461239 CFDP1Q9UEE9 299 aaPredicted RBP12.41□□□□□ -0.42
ECHDC1-212ENST00000461239 ABCC1P33527 1531 aa12.41□□□□□ -0.42
ECHDC1-212ENST00000461239 POGZQ7Z3K3 1410 aa12.4□□□□□ -0.42
ECHDC1-212ENST00000461239 TRAPPC8Q9Y2L5 1435 aa12.4□□□□□ -0.42
ECHDC1-212ENST00000461239 AFAP1Q8N556 730 aa12.4□□□□□ -0.42
ECHDC1-212ENST00000461239 RNF166Q96A37 237 aaPredicted RBP12.4□□□□□ -0.42
ECHDC1-212ENST00000461239 HRO43593 1189 aa12.39□□□□□ -0.43
ECHDC1-212ENST00000461239 ACTN4O43707 911 aaKnown RBP12.39□□□□□ -0.43
ECHDC1-212ENST00000461239 LSM11P83369 360 aaKnown RBP eCLIP12.39□□□□□ -0.43
ECHDC1-212ENST00000461239 MORN1Q5T089 497 aa12.39□□□□□ -0.43
ECHDC1-212ENST00000461239 TSC1Q92574 1164 aa12.39□□□□□ -0.43
ECHDC1-212ENST00000461239 HNRNPMP52272 730 aaKnown RBP eCLIP12.38□□□□□ -0.43
ECHDC1-212ENST00000461239 PPARGC1BQ86YN6 1023 aaKnown RBP12.38□□□□□ -0.43
ECHDC1-212ENST00000461239 LRCH3Q96II8 777 aa12.38□□□□□ -0.43
ECHDC1-212ENST00000461239 MBD5Q9P267 1494 aa12.38□□□□□ -0.43
ECHDC1-212ENST00000461239 KIAA1107Q9UPP5 1409 aa12.37□□□□□ -0.43
ECHDC1-212ENST00000461239 PRR7Q8TB68 274 aa12.37□□□□□ -0.43
ECHDC1-212ENST00000461239 NECTIN2Q92692 538 aa12.37□□□□□ -0.43
ECHDC1-212ENST00000461239 GLMNQ92990 594 aa12.37□□□□□ -0.43
ECHDC1-212ENST00000461239 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.37□□□□□ -0.43
ECHDC1-212ENST00000461239 ZMYM4Q5VZL5 1548 aa12.37□□□□□ -0.43
ECHDC1-212ENST00000461239 SYCP2Q9BX26 1530 aa12.37□□□□□ -0.43
ECHDC1-212ENST00000461239 MYOM3Q5VTT5 1437 aa12.37□□□□□ -0.43
ECHDC1-212ENST00000461239 YEATS2Q9ULM3 1422 aa12.37□□□□□ -0.43
ECHDC1-212ENST00000461239 ITSN2Q9NZM3 1697 aa12.36□□□□□ -0.43
ECHDC1-212ENST00000461239 KDM5CP41229 1560 aa12.36□□□□□ -0.43
ECHDC1-212ENST00000461239 PUS10Q3MIT2 529 aaKnown RBP12.36□□□□□ -0.43
ECHDC1-212ENST00000461239 SLC27A5Q9Y2P5 690 aa12.36□□□□□ -0.43
ECHDC1-212ENST00000461239 RETREG3Q86VR2 466 aa12.35□□□□□ -0.43
ECHDC1-212ENST00000461239 EPS8L1Q8TE68 723 aa12.35□□□□□ -0.43
ECHDC1-212ENST00000461239 CALR3Q96L12 384 aaKnown RBP12.35□□□□□ -0.43
ECHDC1-212ENST00000461239 CAMSAP2Q08AD1 1489 aa12.34□□□□□ -0.43
ECHDC1-212ENST00000461239 ZNF518AQ6AHZ1 1483 aa12.34□□□□□ -0.43
ECHDC1-212ENST00000461239 MIA2Q96PC5 1412 aa12.34□□□□□ -0.43
ECHDC1-212ENST00000461239 PER1O15534 1290 aaPredicted RBP12.33□□□□□ -0.44
ECHDC1-212ENST00000461239 ADAMTS19Q8TE59 1207 aa12.33□□□□□ -0.44
ECHDC1-212ENST00000461239 PLEKHH2Q8IVE3 1493 aa12.33□□□□□ -0.44
ECHDC1-212ENST00000461239 TRIM26Q12899 539 aaPredicted RBP12.32□□□□□ -0.44
ECHDC1-212ENST00000461239 MAGI2Q86UL8 1455 aa12.32□□□□□ -0.44
ECHDC1-212ENST00000461239 MLH3Q9UHC1 1453 aa12.32□□□□□ -0.44
ECHDC1-212ENST00000461239 SIGLEC1Q9BZZ2 1709 aa12.31□□□□□ -0.44
ECHDC1-212ENST00000461239 FGD6Q6ZV73 1430 aa12.31□□□□□ -0.44
ECHDC1-212ENST00000461239 WASHC4Q2M389 1173 aa12.31□□□□□ -0.44
ECHDC1-212ENST00000461239 Q3C1V9 767 aa12.31□□□□□ -0.44
ECHDC1-212ENST00000461239 DESI1Q6ICB0 168 aa12.31□□□□□ -0.44
ECHDC1-212ENST00000461239 PRR14Q9BWN1 585 aa12.31□□□□□ -0.44
ECHDC1-212ENST00000461239 ZFYVE16Q7Z3T8 1539 aa12.31□□□□□ -0.44
ECHDC1-212ENST00000461239 ARHGEF40Q8TER5 1519 aa12.31□□□□□ -0.44
ECHDC1-212ENST00000461239 RNF19BQ6ZMZ0 732 aa12.3□□□□□ -0.44
ECHDC1-212ENST00000461239 KIDINS220Q9ULH0 1771 aa12.3□□□□□ -0.44
ECHDC1-212ENST00000461239 TCOF1Q13428 1488 aaKnown RBP12.29□□□□□ -0.44
ECHDC1-212ENST00000461239 SOWAHBA6NEL2 793 aa12.29□□□□□ -0.44
ECHDC1-212ENST00000461239 NR6A1Q15406 480 aa12.29□□□□□ -0.44
ECHDC1-212ENST00000461239 ANKK1Q8NFD2 765 aa12.29□□□□□ -0.44
ECHDC1-212ENST00000461239 PTPN23Q9H3S7 1636 aa12.29□□□□□ -0.44
ECHDC1-212ENST00000461239 HECW2Q9P2P5 1572 aa12.28□□□□□ -0.44
ECHDC1-212ENST00000461239 DIP2CQ9Y2E4 1556 aa12.28□□□□□ -0.44
ECHDC1-212ENST00000461239 PDIA4P13667 645 aaKnown RBP12.28□□□□□ -0.44
ECHDC1-212ENST00000461239 APLP1P51693 650 aa12.28□□□□□ -0.44
ECHDC1-212ENST00000461239 VAC14Q08AM6 782 aa12.28□□□□□ -0.44
ECHDC1-212ENST00000461239 BLOC1S3Q6QNY0 202 aa12.28□□□□□ -0.44
ECHDC1-212ENST00000461239 ABCA6Q8N139 1617 aa12.28□□□□□ -0.44
ECHDC1-212ENST00000461239 SPAG9O60271 1321 aaKnown RBP12.28□□□□□ -0.44
ECHDC1-212ENST00000461239 ATP10AO60312 1499 aa12.27□□□□□ -0.44
ECHDC1-212ENST00000461239 ARHGEF5Q12774 1597 aa12.27□□□□□ -0.44
ECHDC1-212ENST00000461239 BCAMP50895 628 aa12.27□□□□□ -0.45
ECHDC1-212ENST00000461239 HDGFL1Q5TGJ6 251 aa12.27□□□□□ -0.45
ECHDC1-212ENST00000461239 PODXL2Q9NZ53 605 aa12.27□□□□□ -0.45
ECHDC1-212ENST00000461239 MYT1LQ9UL68 1186 aa12.27□□□□□ -0.45
ECHDC1-212ENST00000461239 HPS5Q9UPZ3 1129 aa12.27□□□□□ -0.45
ECHDC1-212ENST00000461239 CCDC141Q6ZP82 1450 aa12.27□□□□□ -0.45
ECHDC1-212ENST00000461239 INO80Q9ULG1 1556 aaPredicted RBP12.26□□□□□ -0.45
ECHDC1-212ENST00000461239 SALL2Q9Y467 1007 aaPredicted RBP12.26□□□□□ -0.45
ECHDC1-212ENST00000461239 ABCC5O15440 1437 aa12.26□□□□□ -0.45
ECHDC1-212ENST00000461239 PPP4CP60510 307 aa12.25□□□□□ -0.45
ECHDC1-212ENST00000461239 BRICD5Q6PL45 260 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms