RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 KRT27Q7Z3Y8 459 aa31.33■■■□□ 2.61
TRAF4-207ENST00000461195 MYOM1P52179 1685 aa31.32■■■□□ 2.6
TRAF4-207ENST00000461195 USP35Q9P2H5 1018 aa31.32■■■□□ 2.6
TRAF4-207ENST00000461195 OVOS2A0A0J9YW53 1432 aa31.32■■■□□ 2.6
TRAF4-207ENST00000461195 OVOS2Q6IE36 1432 aa31.32■■■□□ 2.6
TRAF4-207ENST00000461195 RGPD5Q99666 1765 aa31.3■■■□□ 2.6
TRAF4-207ENST00000461195 AXIN2Q9Y2T1 843 aa31.29■■■□□ 2.6
TRAF4-207ENST00000461195 ABCC6O95255 1503 aa31.29■■■□□ 2.6
TRAF4-207ENST00000461195 CRB1P82279 1406 aa31.28■■■□□ 2.6
TRAF4-207ENST00000461195 BARGINQ6ZT62 677 aa31.28■■■□□ 2.6
TRAF4-207ENST00000461195 TCP11L2Q8N4U5 519 aa31.28■■■□□ 2.6
TRAF4-207ENST00000461195 LTN1O94822 1766 aa31.28■■■□□ 2.6
TRAF4-207ENST00000461195 THRAP3Q9Y2W1 955 aaKnown RBP31.26■■■□□ 2.59
TRAF4-207ENST00000461195 BLMP54132 1417 aaPredicted RBP31.25■■■□□ 2.59
TRAF4-207ENST00000461195 COG3Q96JB2 828 aa31.25■■■□□ 2.59
TRAF4-207ENST00000461195 WDR17Q8IZU2 1322 aa31.24■■■□□ 2.59
TRAF4-207ENST00000461195 TOM1L2Q6ZVM7 507 aa31.23■■■□□ 2.59
TRAF4-207ENST00000461195 POLR3GLQ9BT43 218 aa31.22■■■□□ 2.59
TRAF4-207ENST00000461195 KIF20BQ96Q89 1820 aa31.2■■■□□ 2.59
TRAF4-207ENST00000461195 FYB1O15117 783 aa31.2■■■□□ 2.59
TRAF4-207ENST00000461195 DEFB132Q7Z7B7 95 aa31.2■■■□□ 2.59
TRAF4-207ENST00000461195 CSB-PGBD3P0DP91 1061 aa31.19■■■□□ 2.58
TRAF4-207ENST00000461195 SF3B2Q13435 895 aaKnown RBP31.18■■■□□ 2.58
TRAF4-207ENST00000461195 CARD14Q9BXL6 1004 aa31.18■■■□□ 2.58
TRAF4-207ENST00000461195 GGNBP2Q9H3C7 697 aa31.17■■■□□ 2.58
TRAF4-207ENST00000461195 NSD3Q9BZ95 1437 aa31.16■■■□□ 2.58
TRAF4-207ENST00000461195 PARP4Q9UKK3 1724 aaKnown RBP31.16■■■□□ 2.58
TRAF4-207ENST00000461195 FAM182BQ5T319 152 aa31.14■■■□□ 2.58
TRAF4-207ENST00000461195 CARD10Q9BWT7 1032 aa31.14■■■□□ 2.58
TRAF4-207ENST00000461195 WNK3Q9BYP7 1800 aa31.13■■■□□ 2.57
TRAF4-207ENST00000461195 PDE3BQ13370 1112 aa31.13■■■□□ 2.57
TRAF4-207ENST00000461195 ERBB3P21860 1342 aa31.12■■■□□ 2.57
TRAF4-207ENST00000461195 MAP3K19Q56UN5 1328 aa31.1■■■□□ 2.57
TRAF4-207ENST00000461195 IP6K1Q92551 441 aa31.1■■■□□ 2.57
TRAF4-207ENST00000461195 CCDC7Q96M83 1385 aa31.09■■■□□ 2.57
TRAF4-207ENST00000461195 ANKRD24Q8TF21 1146 aa31.09■■■□□ 2.57
TRAF4-207ENST00000461195 FBLN1P23142 703 aa31.08■■■□□ 2.57
TRAF4-207ENST00000461195 FAM196AQ6ZSG2 479 aa31.08■■■□□ 2.57
TRAF4-207ENST00000461195 CDCA7Q9BWT1 371 aaPredicted RBP31.08■■■□□ 2.57
TRAF4-207ENST00000461195 LRRC37A3O60309 1634 aa31.07■■■□□ 2.56
TRAF4-207ENST00000461195 C11orf95C9JLR9 678 aaPredicted RBP31.07■■■□□ 2.56
TRAF4-207ENST00000461195 AMPHP49418 695 aa31.07■■■□□ 2.56
TRAF4-207ENST00000461195 RGPD1P0DJD0 1748 aa31.07■■■□□ 2.56
TRAF4-207ENST00000461195 CGNL1Q0VF96 1302 aa31.05■■■□□ 2.56
TRAF4-207ENST00000461195 NLRP2Q9NX02 1062 aa31.05■■■□□ 2.56
TRAF4-207ENST00000461195 HOXC9P31274 260 aa31.04■■■□□ 2.56
TRAF4-207ENST00000461195 DDB1Q16531 1140 aa31.04■■■□□ 2.56
TRAF4-207ENST00000461195 FAM208AQ9UK61 1670 aaKnown RBP31.03■■■□□ 2.56
TRAF4-207ENST00000461195 RRS1Q15050 365 aaKnown RBP31.03■■■□□ 2.56
TRAF4-207ENST00000461195 DISP2A7MBM2 1401 aa31.03■■■□□ 2.56
TRAF4-207ENST00000461195 RTL1A6NKG5 1358 aa31.03■■■□□ 2.56
TRAF4-207ENST00000461195 PANK3Q9H999 370 aa31.02■■■□□ 2.56
TRAF4-207ENST00000461195 LTV1Q96GA3 475 aaPredicted RBP31■■■□□ 2.55
TRAF4-207ENST00000461195 TNS1Q9HBL0 1735 aaKnown RBP30.99■■■□□ 2.55
TRAF4-207ENST00000461195 BAG6P46379 1132 aa30.99■■■□□ 2.55
TRAF4-207ENST00000461195 KIF7Q2M1P5 1343 aa30.98■■■□□ 2.55
TRAF4-207ENST00000461195 ANKRD26Q9UPS8 1709 aa30.97■■■□□ 2.55
TRAF4-207ENST00000461195 OVOS2A0A0G2JMS6 1433 aa30.97■■■□□ 2.55
TRAF4-207ENST00000461195 TRIM37O94972 964 aa30.96■■■□□ 2.55
TRAF4-207ENST00000461195 PEAK1Q9H792 1746 aa30.95■■■□□ 2.55
TRAF4-207ENST00000461195 KIF24Q5T7B8 1368 aa30.95■■■□□ 2.55
TRAF4-207ENST00000461195 EXOC5O00471 708 aa30.95■■■□□ 2.55
TRAF4-207ENST00000461195 PSDA5PKW4 1024 aaPredicted RBP30.93■■■□□ 2.54
TRAF4-207ENST00000461195 IL2RBP14784 551 aa30.93■■■□□ 2.54
TRAF4-207ENST00000461195 FLT4P35916 1363 aa30.92■■■□□ 2.54
TRAF4-207ENST00000461195 RGPD2P0DJD1 1756 aa30.92■■■□□ 2.54
TRAF4-207ENST00000461195 TNS2Q63HR2 1409 aa30.91■■■□□ 2.54
TRAF4-207ENST00000461195 MARCH10Q8NA82 808 aaPredicted RBP30.91■■■□□ 2.54
TRAF4-207ENST00000461195 INSRP06213 1382 aa30.91■■■□□ 2.54
TRAF4-207ENST00000461195 SMG6Q86US8 1419 aaKnown RBP30.9■■■□□ 2.54
TRAF4-207ENST00000461195 MAP2P11137 1827 aaKnown RBP30.9■■■□□ 2.54
TRAF4-207ENST00000461195 EN1Q05925 392 aaPredicted RBP30.89■■■□□ 2.54
TRAF4-207ENST00000461195 EMILIN1Q9Y6C2 1016 aa30.89■■■□□ 2.54
TRAF4-207ENST00000461195 NSD2O96028 1365 aa30.89■■■□□ 2.54
TRAF4-207ENST00000461195 SBF2Q86WG5 1849 aa30.89■■■□□ 2.53
TRAF4-207ENST00000461195 HSP90AB2PQ58FF8 381 aa30.88■■■□□ 2.53
TRAF4-207ENST00000461195 LRP5O75197 1615 aa30.87■■■□□ 2.53
TRAF4-207ENST00000461195 APBA3O96018 575 aa30.86■■■□□ 2.53
TRAF4-207ENST00000461195 KNSTRNQ9Y448 316 aa30.86■■■□□ 2.53
TRAF4-207ENST00000461195 BCL9O00512 1426 aa30.86■■■□□ 2.53
TRAF4-207ENST00000461195 PPM1GO15355 546 aaPredicted RBP30.84■■■□□ 2.53
TRAF4-207ENST00000461195 NBPF6Q5VWK0 638 aa30.83■■■□□ 2.53
TRAF4-207ENST00000461195 NBPF4Q96M43 638 aa30.83■■■□□ 2.53
TRAF4-207ENST00000461195 TNNT2P45379 298 aaPredicted RBP30.82■■■□□ 2.52
TRAF4-207ENST00000461195 POLKQ9UBT6 870 aa30.82■■■□□ 2.52
TRAF4-207ENST00000461195 WASHC2AQ641Q2 1341 aa30.8■■■□□ 2.52
TRAF4-207ENST00000461195 CAMKK2Q96RR4 588 aa30.8■■■□□ 2.52
TRAF4-207ENST00000461195 PARD3Q8TEW0 1356 aa30.79■■■□□ 2.52
TRAF4-207ENST00000461195 EZH2Q15910 746 aaKnown RBP30.79■■■□□ 2.52
TRAF4-207ENST00000461195 MORC1Q86VD1 984 aa30.78■■■□□ 2.52
TRAF4-207ENST00000461195 BCL11BQ9C0K0 894 aaPredicted RBP30.78■■■□□ 2.52
TRAF4-207ENST00000461195 USHBP1Q8N6Y0 703 aa30.77■■■□□ 2.52
TRAF4-207ENST00000461195 R3HDM1Q15032 1099 aaKnown RBP30.76■■■□□ 2.51
TRAF4-207ENST00000461195 MEGF6O75095 1541 aa30.76■■■□□ 2.51
TRAF4-207ENST00000461195 AMER1Q5JTC6 1135 aaPredicted RBP30.75■■■□□ 2.51
TRAF4-207ENST00000461195 RAPGEF4Q8WZA2 1011 aa30.74■■■□□ 2.51
TRAF4-207ENST00000461195 DDX54Q8TDD1 881 aaKnown RBP30.73■■■□□ 2.51
TRAF4-207ENST00000461195 RREB1Q92766 1687 aa30.73■■■□□ 2.51
TRAF4-207ENST00000461195 PER1O15534 1290 aaPredicted RBP30.72■■■□□ 2.51
TRAF4-207ENST00000461195 PTF1AQ7RTS3 328 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms