RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 RGPD4Q7Z3J3 1758 aa21.01■□□□□ 0.95
SMPD4-216ENST00000461187 NFAT5O94916 1531 aa21■□□□□ 0.95
SMPD4-216ENST00000461187 AXIN2Q9Y2T1 843 aa21■□□□□ 0.95
SMPD4-216ENST00000461187 TTC21AQ8NDW8 1320 aa21■□□□□ 0.95
SMPD4-216ENST00000461187 SBNO2Q9Y2G9 1366 aa20.99■□□□□ 0.95
SMPD4-216ENST00000461187 KAT6BQ8WYB5 2073 aa20.98■□□□□ 0.95
SMPD4-216ENST00000461187 ARHGEF25Q86VW2 580 aa20.98■□□□□ 0.95
SMPD4-216ENST00000461187 KTN1Q86UP2 1357 aaKnown RBP20.97■□□□□ 0.95
SMPD4-216ENST00000461187 TOM1L2Q6ZVM7 507 aa20.97■□□□□ 0.95
SMPD4-216ENST00000461187 KCNH5Q8NCM2 988 aa20.97■□□□□ 0.95
SMPD4-216ENST00000461187 WDR17Q8IZU2 1322 aa20.97■□□□□ 0.95
SMPD4-216ENST00000461187 OVOS2A0A0G2JMS6 1433 aa20.96■□□□□ 0.95
SMPD4-216ENST00000461187 OVOS2A0A0J9YW53 1432 aa20.96■□□□□ 0.95
SMPD4-216ENST00000461187 OVOS2Q6IE36 1432 aa20.96■□□□□ 0.95
SMPD4-216ENST00000461187 C11orf95C9JLR9 678 aaPredicted RBP20.95■□□□□ 0.94
SMPD4-216ENST00000461187 CARD11Q9BXL7 1154 aa20.95■□□□□ 0.94
SMPD4-216ENST00000461187 CD163L1Q9NR16 1453 aa20.94■□□□□ 0.94
SMPD4-216ENST00000461187 ABCC6O95255 1503 aa20.94■□□□□ 0.94
SMPD4-216ENST00000461187 SOX12O15370 315 aa20.94■□□□□ 0.94
SMPD4-216ENST00000461187 DDB1Q16531 1140 aa20.93■□□□□ 0.94
SMPD4-216ENST00000461187 USP31Q70CQ4 1352 aa20.91■□□□□ 0.94
SMPD4-216ENST00000461187 CDCA7Q9BWT1 371 aaPredicted RBP20.9■□□□□ 0.94
SMPD4-216ENST00000461187 CARD10Q9BWT7 1032 aa20.9■□□□□ 0.94
SMPD4-216ENST00000461187 TONSLQ96HA7 1378 aa20.89■□□□□ 0.93
SMPD4-216ENST00000461187 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.89■□□□□ 0.93
SMPD4-216ENST00000461187 CSB-PGBD3P0DP91 1061 aa20.88■□□□□ 0.93
SMPD4-216ENST00000461187 NBPF14Q5TI25 921 aa20.88■□□□□ 0.93
SMPD4-216ENST00000461187 MARCH10Q8NA82 808 aaPredicted RBP20.88■□□□□ 0.93
SMPD4-216ENST00000461187 BCL9O00512 1426 aa20.87■□□□□ 0.93
SMPD4-216ENST00000461187 NME9Q86XW9 330 aa20.87■□□□□ 0.93
SMPD4-216ENST00000461187 SLC12A5Q9H2X9 1139 aa20.87■□□□□ 0.93
SMPD4-216ENST00000461187 PLSCR1O15162 318 aa20.86■□□□□ 0.93
SMPD4-216ENST00000461187 PTF1AQ7RTS3 328 aa20.86■□□□□ 0.93
SMPD4-216ENST00000461187 TMC1Q8TDI8 760 aa20.86■□□□□ 0.93
SMPD4-216ENST00000461187 BCL11BQ9C0K0 894 aaPredicted RBP20.85■□□□□ 0.93
SMPD4-216ENST00000461187 EDC4Q6P2E9 1401 aaKnown RBP20.85■□□□□ 0.93
SMPD4-216ENST00000461187 CASZ1Q86V15 1759 aa20.85■□□□□ 0.93
SMPD4-216ENST00000461187 CCDC7Q96M83 1385 aa20.85■□□□□ 0.93
SMPD4-216ENST00000461187 HDGFL2Q7Z4V5 671 aaPredicted RBP20.84■□□□□ 0.93
SMPD4-216ENST00000461187 NHSQ6T4R5 1651 aa20.83■□□□□ 0.93
SMPD4-216ENST00000461187 PUS7Q96PZ0 661 aaKnown RBP20.83■□□□□ 0.93
SMPD4-216ENST00000461187 A0A1W2PP64 1363 aa20.83■□□□□ 0.92
SMPD4-216ENST00000461187 RGPD2P0DJD1 1756 aa20.82■□□□□ 0.92
SMPD4-216ENST00000461187 TNS2Q63HR2 1409 aa20.82■□□□□ 0.92
SMPD4-216ENST00000461187 EXOC5O00471 708 aa20.82■□□□□ 0.92
SMPD4-216ENST00000461187 FAM208AQ9UK61 1670 aaKnown RBP20.82■□□□□ 0.92
SMPD4-216ENST00000461187 ERBB3P21860 1342 aa20.81■□□□□ 0.92
SMPD4-216ENST00000461187 TERF2IPQ9NYB0 399 aa20.81■□□□□ 0.92
SMPD4-216ENST00000461187 BTAF1O14981 1849 aa20.81■□□□□ 0.92
SMPD4-216ENST00000461187 TESK2Q96S53 571 aa20.8■□□□□ 0.92
SMPD4-216ENST00000461187 PROM2Q8N271 834 aa20.79■□□□□ 0.92
SMPD4-216ENST00000461187 ANO8Q9HCE9 1232 aaPredicted RBP20.78■□□□□ 0.92
SMPD4-216ENST00000461187 ST20-MTHFSA0A0A6YYL1 179 aa20.77■□□□□ 0.92
SMPD4-216ENST00000461187 NLRP2Q9NX02 1062 aa20.77■□□□□ 0.92
SMPD4-216ENST00000461187 NINLQ9Y2I6 1382 aa20.76■□□□□ 0.91
SMPD4-216ENST00000461187 ANKRD24Q8TF21 1146 aa20.76■□□□□ 0.91
SMPD4-216ENST00000461187 SPON1Q9HCB6 807 aa20.76■□□□□ 0.91
SMPD4-216ENST00000461187 KCNQ2O43526 872 aa20.75■□□□□ 0.91
SMPD4-216ENST00000461187 IL2RBP14784 551 aa20.73■□□□□ 0.91
SMPD4-216ENST00000461187 SHANK3Q9BYB0 1731 aa20.73■□□□□ 0.91
SMPD4-216ENST00000461187 KIF20BQ96Q89 1820 aa20.72■□□□□ 0.91
SMPD4-216ENST00000461187 TXNRD1Q16881 649 aa20.72■□□□□ 0.91
SMPD4-216ENST00000461187 SLC24A1O60721 1099 aa20.71■□□□□ 0.91
SMPD4-216ENST00000461187 IP6K1Q92551 441 aa20.71■□□□□ 0.91
SMPD4-216ENST00000461187 PDGFDQ9GZP0 370 aaPredicted RBP20.71■□□□□ 0.91
SMPD4-216ENST00000461187 ACSBG1Q96GR2 724 aa20.7■□□□□ 0.9
SMPD4-216ENST00000461187 PAPPAQ13219 1627 aa20.7■□□□□ 0.9
SMPD4-216ENST00000461187 MYOM1P52179 1685 aa20.7■□□□□ 0.9
SMPD4-216ENST00000461187 TRIM26Q12899 539 aaPredicted RBP20.69■□□□□ 0.9
SMPD4-216ENST00000461187 PPP1R1BQ9UD71 204 aaPredicted RBP20.69■□□□□ 0.9
SMPD4-216ENST00000461187 COG3Q96JB2 828 aa20.68■□□□□ 0.9
SMPD4-216ENST00000461187 ANKRD36BQ8N2N9 1353 aa20.68■□□□□ 0.9
SMPD4-216ENST00000461187 DOT1LQ8TEK3 1739 aa20.67■□□□□ 0.9
SMPD4-216ENST00000461187 FBLN1P23142 703 aa20.66■□□□□ 0.9
SMPD4-216ENST00000461187 SLC15A2Q16348 729 aa20.66■□□□□ 0.9
SMPD4-216ENST00000461187 LTV1Q96GA3 475 aaPredicted RBP20.66■□□□□ 0.9
SMPD4-216ENST00000461187 STK32BQ9NY57 414 aa20.66■□□□□ 0.9
SMPD4-216ENST00000461187 MAP3K19Q56UN5 1328 aa20.66■□□□□ 0.9
SMPD4-216ENST00000461187 QSER1Q2KHR3 1735 aa20.66■□□□□ 0.9
SMPD4-216ENST00000461187 TUBGCP6Q96RT7 1819 aa20.65■□□□□ 0.9
SMPD4-216ENST00000461187 USP47Q96K76 1375 aa20.65■□□□□ 0.9
SMPD4-216ENST00000461187 LY75O60449 1722 aa20.64■□□□□ 0.9
SMPD4-216ENST00000461187 HOXC9P31274 260 aa20.64■□□□□ 0.89
SMPD4-216ENST00000461187 ZBTB7AO95365 584 aa20.63■□□□□ 0.89
SMPD4-216ENST00000461187 TMF1P82094 1093 aa20.63■□□□□ 0.89
SMPD4-216ENST00000461187 AMPHP49418 695 aa20.62■□□□□ 0.89
SMPD4-216ENST00000461187 FYB1O15117 783 aa20.61■□□□□ 0.89
SMPD4-216ENST00000461187 PTGER2P43116 358 aa20.61■□□□□ 0.89
SMPD4-216ENST00000461187 DDX54Q8TDD1 881 aaKnown RBP20.61■□□□□ 0.89
SMPD4-216ENST00000461187 MAP2P11137 1827 aaKnown RBP20.61■□□□□ 0.89
SMPD4-216ENST00000461187 ATF5Q9Y2D1 282 aaPredicted RBP20.6■□□□□ 0.89
SMPD4-216ENST00000461187 CHD4Q14839 1912 aa20.6■□□□□ 0.89
SMPD4-216ENST00000461187 RTL1A6NKG5 1358 aa20.59■□□□□ 0.89
SMPD4-216ENST00000461187 COL24A1Q17RW2 1714 aa20.58■□□□□ 0.89
SMPD4-216ENST00000461187 MEGF6O75095 1541 aa20.58■□□□□ 0.89
SMPD4-216ENST00000461187 RRS1Q15050 365 aaKnown RBP20.58■□□□□ 0.89
SMPD4-216ENST00000461187 GGNBP2Q9H3C7 697 aa20.58■□□□□ 0.89
SMPD4-216ENST00000461187 LRRC4BQ9NT99 713 aa20.58■□□□□ 0.89
SMPD4-216ENST00000461187 ITGB4P16144 1822 aa20.56■□□□□ 0.88
SMPD4-216ENST00000461187 SGIP1Q9BQI5 828 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms