RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 COG3Q96JB2 828 aa11.25□□□□□ -0.61
SND1-202ENST00000461056 NWD2Q9ULI1 1742 aa11.25□□□□□ -0.61
SND1-202ENST00000461056 MAP3K19Q56UN5 1328 aa11.25□□□□□ -0.61
SND1-202ENST00000461056 PEAK1Q9H792 1746 aa11.24□□□□□ -0.61
SND1-202ENST00000461056 ANKRD26Q9UPS8 1709 aa11.24□□□□□ -0.61
SND1-202ENST00000461056 CHRNA2Q15822 529 aa11.24□□□□□ -0.61
SND1-202ENST00000461056 UNC5CLQ8IV45 518 aa11.24□□□□□ -0.61
SND1-202ENST00000461056 PRDM11Q9NQV5 511 aa11.24□□□□□ -0.61
SND1-202ENST00000461056 RTL1A6NKG5 1358 aa11.24□□□□□ -0.61
SND1-202ENST00000461056 PLEKHG5O94827 1062 aa11.23□□□□□ -0.61
SND1-202ENST00000461056 NGLY1Q96IV0 654 aa11.23□□□□□ -0.61
SND1-202ENST00000461056 KNSTRNQ9Y448 316 aa11.23□□□□□ -0.61
SND1-202ENST00000461056 KIF24Q5T7B8 1368 aa11.23□□□□□ -0.61
SND1-202ENST00000461056 GLI3P10071 1580 aa11.23□□□□□ -0.61
SND1-202ENST00000461056 ZNF316A6NFI3 1004 aaPredicted RBP11.22□□□□□ -0.61
SND1-202ENST00000461056 VPS72Q15906 364 aa11.22□□□□□ -0.61
SND1-202ENST00000461056 MEX3CQ5U5Q3 659 aaKnown RBP11.22□□□□□ -0.61
SND1-202ENST00000461056 BTG4Q9NY30 223 aa11.22□□□□□ -0.61
SND1-202ENST00000461056 POLKQ9UBT6 870 aa11.22□□□□□ -0.61
SND1-202ENST00000461056 USP21Q9UK80 565 aa11.22□□□□□ -0.61
SND1-202ENST00000461056 BLMP54132 1417 aaPredicted RBP11.21□□□□□ -0.61
SND1-202ENST00000461056 NCAPD2Q15021 1401 aa11.21□□□□□ -0.61
SND1-202ENST00000461056 SPATA31A5Q5VU36 1347 aa11.21□□□□□ -0.61
SND1-202ENST00000461056 SPATA31A7Q8IWB4 1347 aa11.21□□□□□ -0.61
SND1-202ENST00000461056 ZNF772Q68DY9 489 aaPredicted RBP11.21□□□□□ -0.61
SND1-202ENST00000461056 IP6K1Q92551 441 aa11.21□□□□□ -0.61
SND1-202ENST00000461056 CDK12Q9NYV4 1490 aaPredicted RBP11.2□□□□□ -0.62
SND1-202ENST00000461056 INSRP06213 1382 aa11.2□□□□□ -0.62
SND1-202ENST00000461056 PARD3Q8TEW0 1356 aa11.2□□□□□ -0.62
SND1-202ENST00000461056 ERBB3P21860 1342 aa11.2□□□□□ -0.62
SND1-202ENST00000461056 SOX12O15370 315 aa11.2□□□□□ -0.62
SND1-202ENST00000461056 HOXC9P31274 260 aa11.2□□□□□ -0.62
SND1-202ENST00000461056 HAP1P54257 671 aaPredicted RBP11.2□□□□□ -0.62
SND1-202ENST00000461056 RRS1Q15050 365 aaKnown RBP11.2□□□□□ -0.62
SND1-202ENST00000461056 EMILIN1Q9Y6C2 1016 aa11.2□□□□□ -0.62
SND1-202ENST00000461056 EP400Q96L91 3159 aa11.2□□□□□ -0.62
SND1-202ENST00000461056 DISP2A7MBM2 1401 aa11.19□□□□□ -0.62
SND1-202ENST00000461056 WDR17Q8IZU2 1322 aa11.19□□□□□ -0.62
SND1-202ENST00000461056 ONECUT3O60422 494 aaPredicted RBP11.19□□□□□ -0.62
SND1-202ENST00000461056 LARP1Q6PKG0 1096 aaKnown RBP11.19□□□□□ -0.62
SND1-202ENST00000461056 TRPC5Q9UL62 973 aaPredicted RBP11.19□□□□□ -0.62
SND1-202ENST00000461056 COL3A1P02461 1466 aaPredicted RBP11.19□□□□□ -0.62
SND1-202ENST00000461056 RGS12O14924 1447 aa11.18□□□□□ -0.62
SND1-202ENST00000461056 FLT4P35916 1363 aa11.18□□□□□ -0.62
SND1-202ENST00000461056 SPATA31A1Q5TZJ5 1347 aa11.18□□□□□ -0.62
SND1-202ENST00000461056 DDX10Q13206 875 aaKnown RBP11.18□□□□□ -0.62
SND1-202ENST00000461056 QTRT2Q9H974 415 aaKnown RBP11.18□□□□□ -0.62
SND1-202ENST00000461056 SPINK5Q9NQ38 1064 aaPredicted RBP11.18□□□□□ -0.62
SND1-202ENST00000461056 CRB1P82279 1406 aa11.18□□□□□ -0.62
SND1-202ENST00000461056 THSD7AQ9UPZ6 1657 aa11.17□□□□□ -0.62
SND1-202ENST00000461056 HSP90AB2PQ58FF8 381 aa11.17□□□□□ -0.62
SND1-202ENST00000461056 MORC1Q86VD1 984 aa11.17□□□□□ -0.62
SND1-202ENST00000461056 GJD4Q96KN9 370 aaPredicted RBP11.17□□□□□ -0.62
SND1-202ENST00000461056 LTN1O94822 1766 aa11.17□□□□□ -0.62
SND1-202ENST00000461056 RBM6P78332 1123 aaKnown RBP11.16□□□□□ -0.62
SND1-202ENST00000461056 CC2D1BQ5T0F9 858 aaKnown RBP11.16□□□□□ -0.62
SND1-202ENST00000461056 ILDR2Q71H61 639 aa11.16□□□□□ -0.62
SND1-202ENST00000461056 FAM208AQ9UK61 1670 aaKnown RBP11.15□□□□□ -0.62
SND1-202ENST00000461056 ANKRD24Q8TF21 1146 aa11.15□□□□□ -0.62
SND1-202ENST00000461056 CARD10Q9BWT7 1032 aa11.15□□□□□ -0.62
SND1-202ENST00000461056 TNNT2P45379 298 aaPredicted RBP11.14□□□□□ -0.63
SND1-202ENST00000461056 BARGINQ6ZT62 677 aa11.14□□□□□ -0.63
SND1-202ENST00000461056 CAPN15O75808 1086 aa11.13□□□□□ -0.63
SND1-202ENST00000461056 RXRBP28702 533 aa11.13□□□□□ -0.63
SND1-202ENST00000461056 PPP2R1AP30153 589 aa11.13□□□□□ -0.63
SND1-202ENST00000461056 EIF4A2Q14240 407 aaKnown RBP11.13□□□□□ -0.63
SND1-202ENST00000461056 STRN4Q9NRL3 753 aa11.13□□□□□ -0.63
SND1-202ENST00000461056 ZBTB7CA1YPR0 619 aa11.12□□□□□ -0.63
SND1-202ENST00000461056 IL13P35225 146 aa11.12□□□□□ -0.63
SND1-202ENST00000461056 AMPHP49418 695 aa11.12□□□□□ -0.63
SND1-202ENST00000461056 MTHFSP49914 203 aa11.12□□□□□ -0.63
SND1-202ENST00000461056 NBPF6Q5VWK0 638 aa11.12□□□□□ -0.63
SND1-202ENST00000461056 TCP11L2Q8N4U5 519 aa11.12□□□□□ -0.63
SND1-202ENST00000461056 NBPF4Q96M43 638 aa11.12□□□□□ -0.63
SND1-202ENST00000461056 THRAP3Q9Y2W1 955 aaKnown RBP11.12□□□□□ -0.63
SND1-202ENST00000461056 RGPD1P0DJD0 1748 aa11.12□□□□□ -0.63
SND1-202ENST00000461056 IGSF1Q8N6C5 1336 aa11.11□□□□□ -0.63
SND1-202ENST00000461056 RGPD5Q99666 1765 aa11.11□□□□□ -0.63
SND1-202ENST00000461056 MEGF6O75095 1541 aa11.1□□□□□ -0.63
SND1-202ENST00000461056 FAM98CQ17RN3 349 aaKnown RBP11.1□□□□□ -0.63
SND1-202ENST00000461056 EYA1Q99502 592 aa11.1□□□□□ -0.63
SND1-202ENST00000461056 PRKRIP1Q9H875 184 aaPredicted RBP11.1□□□□□ -0.63
SND1-202ENST00000461056 KDRP35968 1356 aa11.1□□□□□ -0.63
SND1-202ENST00000461056 OVOS2A0A0G2JMS6 1433 aa11.09□□□□□ -0.63
SND1-202ENST00000461056 PLEKHG2Q9H7P9 1386 aa11.09□□□□□ -0.63
SND1-202ENST00000461056 EVA1CP58658 441 aa11.09□□□□□ -0.63
SND1-202ENST00000461056 RALBP1Q15311 655 aa11.09□□□□□ -0.63
SND1-202ENST00000461056 TOM1L2Q6ZVM7 507 aa11.09□□□□□ -0.63
SND1-202ENST00000461056 SEPT12Q8IYM1 358 aa11.09□□□□□ -0.63
SND1-202ENST00000461056 WNK3Q9BYP7 1800 aa11.09□□□□□ -0.63
SND1-202ENST00000461056 PARP4Q9UKK3 1724 aaKnown RBP11.09□□□□□ -0.63
SND1-202ENST00000461056 LRRC37A3O60309 1634 aa11.09□□□□□ -0.63
SND1-202ENST00000461056 MAP2P11137 1827 aaKnown RBP11.08□□□□□ -0.64
SND1-202ENST00000461056 LTV1Q96GA3 475 aaPredicted RBP11.08□□□□□ -0.64
SND1-202ENST00000461056 NLRP2Q9NX02 1062 aa11.08□□□□□ -0.64
SND1-202ENST00000461056 BCL9O00512 1426 aa11.08□□□□□ -0.64
SND1-202ENST00000461056 TNS2Q63HR2 1409 aa11.08□□□□□ -0.64
SND1-202ENST00000461056 PPM1GO15355 546 aaPredicted RBP11.07□□□□□ -0.64
SND1-202ENST00000461056 CSB-PGBD3P0DP91 1061 aa11.06□□□□□ -0.64
SND1-202ENST00000461056 AEBP1Q8IUX7 1158 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms