RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 CARD14Q9BXL6 1004 aa5.42□□□□□ -1.54
HPS3-203ENST00000460822 FKBPLQ9UIM3 349 aa5.42□□□□□ -1.54
HPS3-203ENST00000460822 APBB1O00213 710 aa5.41□□□□□ -1.54
HPS3-203ENST00000460822 ADH1CP00326 375 aa5.41□□□□□ -1.54
HPS3-203ENST00000460822 USP17L8P0C7I0 530 aa5.41□□□□□ -1.54
HPS3-203ENST00000460822 KCNMA1Q12791 1236 aa5.41□□□□□ -1.54
HPS3-203ENST00000460822 PDXDC2PQ6P474 469 aa5.41□□□□□ -1.54
HPS3-203ENST00000460822 PTK2Q05397 1052 aa5.4□□□□□ -1.54
HPS3-203ENST00000460822 NR5A1Q13285 461 aa5.4□□□□□ -1.54
HPS3-203ENST00000460822 VASH1Q7L8A9 365 aaPredicted RBP5.4□□□□□ -1.54
HPS3-203ENST00000460822 CDK15Q96Q40 435 aa5.4□□□□□ -1.54
HPS3-203ENST00000460822 WDR4P57081 412 aaKnown RBP5.4□□□□□ -1.55
HPS3-203ENST00000460822 TRIM26Q12899 539 aaPredicted RBP5.4□□□□□ -1.55
HPS3-203ENST00000460822 SH3BP5LQ7L8J4 393 aa5.4□□□□□ -1.55
HPS3-203ENST00000460822 C4orf48Q5BLP8 95 aa5.39□□□□□ -1.55
HPS3-203ENST00000460822 FBXO31Q5XUX0 539 aaPredicted RBP5.39□□□□□ -1.55
HPS3-203ENST00000460822 SCARF1Q14162 830 aa5.38□□□□□ -1.55
HPS3-203ENST00000460822 TRIM46Q7Z4K8 759 aa5.38□□□□□ -1.55
HPS3-203ENST00000460822 SH3RF1Q7Z6J0 888 aa5.38□□□□□ -1.55
HPS3-203ENST00000460822 SLC10A4Q96EP9 437 aa5.38□□□□□ -1.55
HPS3-203ENST00000460822 CDV3Q9UKY7 258 aaKnown RBP5.38□□□□□ -1.55
HPS3-203ENST00000460822 ERBB4Q15303 1308 aa5.38□□□□□ -1.55
HPS3-203ENST00000460822 TRMT44Q8IYL2 757 aaKnown RBP5.38□□□□□ -1.55
HPS3-203ENST00000460822 CLUAP1Q96AJ1 413 aa5.38□□□□□ -1.55
HPS3-203ENST00000460822 C1QTNF2Q9BXJ5 285 aa5.38□□□□□ -1.55
HPS3-203ENST00000460822 GPSM3Q9Y4H4 160 aa5.38□□□□□ -1.55
HPS3-203ENST00000460822 FSHRP23945 695 aa5.37□□□□□ -1.55
HPS3-203ENST00000460822 ERFEQ4G0M1 354 aa5.37□□□□□ -1.55
HPS3-203ENST00000460822 MAP4K5Q9Y4K4 846 aa5.37□□□□□ -1.55
HPS3-203ENST00000460822 UPP2O95045 317 aa5.36□□□□□ -1.55
HPS3-203ENST00000460822 ZIC2O95409 532 aaPredicted RBP5.36□□□□□ -1.55
HPS3-203ENST00000460822 GSK3AP49840 483 aa5.36□□□□□ -1.55
HPS3-203ENST00000460822 BMP1P13497 986 aa5.36□□□□□ -1.55
HPS3-203ENST00000460822 TIMP2P16035 220 aa5.36□□□□□ -1.55
HPS3-203ENST00000460822 VEGFBP49765 207 aa5.36□□□□□ -1.55
HPS3-203ENST00000460822 MCM6Q14566 821 aa5.36□□□□□ -1.55
HPS3-203ENST00000460822 DZIP3Q86Y13 1208 aaKnown RBP5.36□□□□□ -1.55
HPS3-203ENST00000460822 HMX1Q9NP08 348 aaPredicted RBP5.36□□□□□ -1.55
HPS3-203ENST00000460822 EMILIN1Q9Y6C2 1016 aa5.36□□□□□ -1.55
HPS3-203ENST00000460822 A6NJR5 290 aa5.35□□□□□ -1.55
HPS3-203ENST00000460822 GRM5P41594 1212 aa5.35□□□□□ -1.55
HPS3-203ENST00000460822 CCDC116Q8IYX3 515 aa5.35□□□□□ -1.55
HPS3-203ENST00000460822 CCDC82Q8N4S0 544 aa5.35□□□□□ -1.55
HPS3-203ENST00000460822 KCTD17Q8N5Z5 321 aa5.35□□□□□ -1.55
HPS3-203ENST00000460822 BANK1Q8NDB2 785 aa5.35□□□□□ -1.55
HPS3-203ENST00000460822 EPS8L1Q8TE68 723 aa5.35□□□□□ -1.55
HPS3-203ENST00000460822 PGPEP1Q9NXJ5 209 aa5.35□□□□□ -1.55
HPS3-203ENST00000460822 VSIG8P0DPA2 414 aa5.35□□□□□ -1.55
HPS3-203ENST00000460822 DHX9Q08211 1270 aaKnown RBP5.35□□□□□ -1.55
HPS3-203ENST00000460822 MRPL14Q6P1L8 145 aaKnown RBP5.35□□□□□ -1.55
HPS3-203ENST00000460822 ADAM32Q8TC27 787 aa5.35□□□□□ -1.55
HPS3-203ENST00000460822 TRIM52Q96A61 297 aa5.35□□□□□ -1.55
HPS3-203ENST00000460822 KCTD15Q96SI1 283 aaPredicted RBP5.35□□□□□ -1.55
HPS3-203ENST00000460822 TRAK2O60296 914 aa5.34□□□□□ -1.55
HPS3-203ENST00000460822 NR3C2P08235 984 aa5.34□□□□□ -1.55
HPS3-203ENST00000460822 ITPKCQ96DU7 683 aa5.34□□□□□ -1.55
HPS3-203ENST00000460822 ZFAND3Q9H8U3 227 aa5.34□□□□□ -1.55
HPS3-203ENST00000460822 PRM3Q9NNZ6 103 aa5.34□□□□□ -1.55
HPS3-203ENST00000460822 NBPF20Q3BBV1 942 aa5.33□□□□□ -1.56
HPS3-203ENST00000460822 ZFP42Q96MM3 310 aa5.33□□□□□ -1.56
HPS3-203ENST00000460822 PURBQ96QR8 312 aaKnown RBP5.33□□□□□ -1.56
HPS3-203ENST00000460822 ZNF330Q9Y3S2 320 aaPredicted RBP5.33□□□□□ -1.56
HPS3-203ENST00000460822 BMP2P12643 396 aa5.33□□□□□ -1.56
HPS3-203ENST00000460822 C6orf118Q5T5N4 469 aa5.33□□□□□ -1.56
HPS3-203ENST00000460822 TMEM151AQ8N4L1 468 aa5.33□□□□□ -1.56
HPS3-203ENST00000460822 RAB15P59190 212 aa5.32□□□□□ -1.56
HPS3-203ENST00000460822 ZNF592Q92610 1267 aa5.32□□□□□ -1.56
HPS3-203ENST00000460822 KLF16Q9BXK1 252 aaPredicted RBP5.32□□□□□ -1.56
HPS3-203ENST00000460822 TRIM34Q9BYJ4 488 aa5.32□□□□□ -1.56
HPS3-203ENST00000460822 ZBBXA8MT70 800 aa5.31□□□□□ -1.56
HPS3-203ENST00000460822 PPP1R26Q5T8A7 1209 aaPredicted RBP5.31□□□□□ -1.56
HPS3-203ENST00000460822 PCDHB9Q9Y5E1 797 aa5.31□□□□□ -1.56
HPS3-203ENST00000460822 NDUFB9Q9Y6M9 179 aa5.31□□□□□ -1.56
HPS3-203ENST00000460822 TSEN34Q9BSV6 310 aaKnown RBP5.31□□□□□ -1.56
HPS3-203ENST00000460822 PDIA4P13667 645 aaKnown RBP5.3□□□□□ -1.56
HPS3-203ENST00000460822 INTS6LQ5JSJ4 861 aaKnown RBP5.3□□□□□ -1.56
HPS3-203ENST00000460822 PROSER2Q86WR7 435 aaPredicted RBP5.3□□□□□ -1.56
HPS3-203ENST00000460822 LINC00528Q8N1L1 170 aa5.3□□□□□ -1.56
HPS3-203ENST00000460822 POM121Q96HA1 1249 aa5.3□□□□□ -1.56
HPS3-203ENST00000460822 MAN1A2O60476 641 aa5.29□□□□□ -1.56
HPS3-203ENST00000460822 MCCD1P59942 119 aaPredicted RBP5.29□□□□□ -1.56
HPS3-203ENST00000460822 MEIOBQ8N635 442 aa5.29□□□□□ -1.56
HPS3-203ENST00000460822 GJD4Q96KN9 370 aaPredicted RBP5.29□□□□□ -1.56
HPS3-203ENST00000460822 OCSTAMPQ9BR26 566 aa5.29□□□□□ -1.56
HPS3-203ENST00000460822 SOCS7O14512 581 aa5.29□□□□□ -1.56
HPS3-203ENST00000460822 GDF11O95390 407 aa5.29□□□□□ -1.56
HPS3-203ENST00000460822 RANGAP1P46060 587 aaPredicted RBP5.29□□□□□ -1.56
HPS3-203ENST00000460822 RASSF7Q02833 373 aa5.29□□□□□ -1.56
HPS3-203ENST00000460822 SNRKQ9NRH2 765 aa5.29□□□□□ -1.56
HPS3-203ENST00000460822 ZNF777Q9ULD5 760 aaPredicted RBP5.29□□□□□ -1.56
HPS3-203ENST00000460822 NR1H3Q13133 447 aa5.28□□□□□ -1.56
HPS3-203ENST00000460822 RAD21O60216 631 aa5.27□□□□□ -1.57
HPS3-203ENST00000460822 FBXO45P0C2W1 286 aa5.27□□□□□ -1.57
HPS3-203ENST00000460822 CBLBQ13191 982 aa5.27□□□□□ -1.57
HPS3-203ENST00000460822 RNF20Q5VTR2 975 aa5.27□□□□□ -1.57
HPS3-203ENST00000460822 CCDC125Q86Z20 511 aa5.27□□□□□ -1.57
HPS3-203ENST00000460822 SEPT12Q8IYM1 358 aa5.27□□□□□ -1.57
HPS3-203ENST00000460822 MTMR14Q8NCE2 650 aa5.27□□□□□ -1.57
HPS3-203ENST00000460822 ESF1Q9H501 851 aaKnown RBP5.27□□□□□ -1.57
HPS3-203ENST00000460822 FNBP4Q8N3X1 1017 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms