RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 LMOD1P29536 600 aaPredicted RBP9.07□□□□□ -0.96
VBP1-202ENST00000460509 TBC1D9Q6ZT07 1266 aa9.07□□□□□ -0.96
VBP1-202ENST00000460509 UCN2Q96RP3 112 aa9.07□□□□□ -0.96
VBP1-202ENST00000460509 C1QTNF2Q9BXJ5 285 aa9.07□□□□□ -0.96
VBP1-202ENST00000460509 PDZRN3Q9UPQ7 1066 aa9.07□□□□□ -0.96
VBP1-202ENST00000460509 GIGYF1O75420 1035 aaPredicted RBP9.06□□□□□ -0.96
VBP1-202ENST00000460509 NBPF20Q3BBV1 942 aa9.06□□□□□ -0.96
VBP1-202ENST00000460509 ZNF598Q86UK7 904 aaKnown RBP9.06□□□□□ -0.96
VBP1-202ENST00000460509 MRGPRX2Q96LB1 330 aa9.06□□□□□ -0.96
VBP1-202ENST00000460509 CDV3Q9UKY7 258 aaKnown RBP9.05□□□□□ -0.96
VBP1-202ENST00000460509 TLL2Q9Y6L7 1015 aa9.05□□□□□ -0.96
VBP1-202ENST00000460509 WNT7AO00755 349 aa9.04□□□□□ -0.96
VBP1-202ENST00000460509 TRMT44Q8IYL2 757 aaKnown RBP9.04□□□□□ -0.96
VBP1-202ENST00000460509 KCTD15Q96SI1 283 aaPredicted RBP9.04□□□□□ -0.96
VBP1-202ENST00000460509 ATP9BO43861 1147 aa9.03□□□□□ -0.96
VBP1-202ENST00000460509 RNF20Q5VTR2 975 aa9.03□□□□□ -0.96
VBP1-202ENST00000460509 DEPDC4Q8N2C3 294 aa9.03□□□□□ -0.96
VBP1-202ENST00000460509 CDCA8Q53HL2 280 aa9.02□□□□□ -0.97
VBP1-202ENST00000460509 CFAP70Q5T0N1 1121 aa9.02□□□□□ -0.97
VBP1-202ENST00000460509 TNFRSF10AO00220 468 aa9.01□□□□□ -0.97
VBP1-202ENST00000460509 ALDH1A1P00352 501 aa9.01□□□□□ -0.97
VBP1-202ENST00000460509 FSHRP23945 695 aa9.01□□□□□ -0.97
VBP1-202ENST00000460509 TSGA10IPQ3SY00 556 aa9.01□□□□□ -0.97
VBP1-202ENST00000460509 TRIM67Q6ZTA4 783 aa9.01□□□□□ -0.97
VBP1-202ENST00000460509 PLPP7Q8NBV4 271 aa9.01□□□□□ -0.97
VBP1-202ENST00000460509 MAFBQ9Y5Q3 323 aaPredicted RBP9.01□□□□□ -0.97
VBP1-202ENST00000460509 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9□□□□□ -0.97
VBP1-202ENST00000460509 TTC24A2A3L6 582 aaPredicted RBP9□□□□□ -0.97
VBP1-202ENST00000460509 USP17L5A8MUK1 530 aa9□□□□□ -0.97
VBP1-202ENST00000460509 SIAH2O43255 324 aa9□□□□□ -0.97
VBP1-202ENST00000460509 OXLD1Q5BKU9 147 aa9□□□□□ -0.97
VBP1-202ENST00000460509 PHTF2Q8N3S3 785 aa9□□□□□ -0.97
VBP1-202ENST00000460509 DOLKQ9UPQ8 538 aa9□□□□□ -0.97
VBP1-202ENST00000460509 PCDHB11Q9Y5F2 797 aa9□□□□□ -0.97
VBP1-202ENST00000460509 USP17L3A6NCW0 530 aa8.99□□□□□ -0.97
VBP1-202ENST00000460509 USP17L4A6NCW7 530 aa8.99□□□□□ -0.97
VBP1-202ENST00000460509 INTS6LQ5JSJ4 861 aaKnown RBP8.99□□□□□ -0.97
VBP1-202ENST00000460509 USP17L2Q6R6M4 530 aa8.99□□□□□ -0.97
VBP1-202ENST00000460509 USP17L1Q7RTZ2 530 aa8.99□□□□□ -0.97
VBP1-202ENST00000460509 NFATC2IPQ8NCF5 419 aa8.99□□□□□ -0.97
VBP1-202ENST00000460509 CCDC85AQ96PX6 553 aaPredicted RBP8.99□□□□□ -0.97
VBP1-202ENST00000460509 PKD2L1Q9P0L9 805 aa8.99□□□□□ -0.97
VBP1-202ENST00000460509 MAP4K5Q9Y4K4 846 aa8.99□□□□□ -0.97
VBP1-202ENST00000460509 WASF2Q9Y6W5 498 aa8.99□□□□□ -0.97
VBP1-202ENST00000460509 NCOA4Q13772 614 aa8.98□□□□□ -0.97
VBP1-202ENST00000460509 CYP4X1Q8N118 509 aa8.98□□□□□ -0.97
VBP1-202ENST00000460509 CDK15Q96Q40 435 aa8.98□□□□□ -0.97
VBP1-202ENST00000460509 ACIN1Q9UKV3 1341 aaKnown RBP8.98□□□□□ -0.97
VBP1-202ENST00000460509 ESPNB1AK53 854 aa8.97□□□□□ -0.97
VBP1-202ENST00000460509 ADH1CP00326 375 aa8.97□□□□□ -0.97
VBP1-202ENST00000460509 GRM5P41594 1212 aa8.97□□□□□ -0.97
VBP1-202ENST00000460509 EML3Q32P44 896 aa8.97□□□□□ -0.97
VBP1-202ENST00000460509 MAP7D1Q3KQU3 841 aa8.97□□□□□ -0.97
VBP1-202ENST00000460509 SEPT12Q8IYM1 358 aa8.97□□□□□ -0.97
VBP1-202ENST00000460509 CDCA7Q9BWT1 371 aaPredicted RBP8.97□□□□□ -0.97
VBP1-202ENST00000460509 ESF1Q9H501 851 aaKnown RBP8.97□□□□□ -0.97
VBP1-202ENST00000460509 VRTNQ9H8Y1 702 aa8.97□□□□□ -0.97
VBP1-202ENST00000460509 ERVH48-1M5A8F1 160 aa8.96□□□□□ -0.98
VBP1-202ENST00000460509 HOMEZQ8IX15 550 aa8.96□□□□□ -0.98
VBP1-202ENST00000460509 SNIP1Q8TAD8 396 aaKnown RBP8.96□□□□□ -0.98
VBP1-202ENST00000460509 PBXIP1Q96AQ6 731 aa8.96□□□□□ -0.98
VBP1-202ENST00000460509 ARXQ96QS3 562 aa8.96□□□□□ -0.98
VBP1-202ENST00000460509 GDF9O60383 454 aa8.95□□□□□ -0.98
VBP1-202ENST00000460509 NR5A1Q13285 461 aa8.95□□□□□ -0.98
VBP1-202ENST00000460509 CCDC116Q8IYX3 515 aa8.95□□□□□ -0.98
VBP1-202ENST00000460509 MPNDQ8N594 471 aa8.95□□□□□ -0.98
VBP1-202ENST00000460509 TMPRSS4Q9NRS4 437 aa8.95□□□□□ -0.98
VBP1-202ENST00000460509 MKRN1Q9UHC7 482 aaKnown RBP8.95□□□□□ -0.98
VBP1-202ENST00000460509 J3QL48 77 aa8.94□□□□□ -0.98
VBP1-202ENST00000460509 DHX9Q08211 1270 aaKnown RBP8.94□□□□□ -0.98
VBP1-202ENST00000460509 PPP1R15AO75807 674 aaPredicted RBP8.93□□□□□ -0.98
VBP1-202ENST00000460509 NR3C2P08235 984 aa8.93□□□□□ -0.98
VBP1-202ENST00000460509 USP4Q13107 963 aa8.93□□□□□ -0.98
VBP1-202ENST00000460509 NNTQ13423 1086 aa8.93□□□□□ -0.98
VBP1-202ENST00000460509 PPP1R26Q5T8A7 1209 aaPredicted RBP8.93□□□□□ -0.98
VBP1-202ENST00000460509 PLEKHM2Q8IWE5 1019 aa8.93□□□□□ -0.98
VBP1-202ENST00000460509 CYLDQ9NQC7 956 aa8.93□□□□□ -0.98
VBP1-202ENST00000460509 CHIC2Q9UKJ5 165 aa8.93□□□□□ -0.98
VBP1-202ENST00000460509 NOD1Q9Y239 953 aa8.93□□□□□ -0.98
VBP1-202ENST00000460509 LZTS3O60299 673 aaPredicted RBP8.92□□□□□ -0.98
VBP1-202ENST00000460509 MYCP01106 439 aaPredicted RBP8.92□□□□□ -0.98
VBP1-202ENST00000460509 RASA1P20936 1047 aa8.92□□□□□ -0.98
VBP1-202ENST00000460509 CCDC125Q86Z20 511 aa8.92□□□□□ -0.98
VBP1-202ENST00000460509 SIRT1Q96EB6 747 aa8.92□□□□□ -0.98
VBP1-202ENST00000460509 PSME1Q06323 249 aa8.91□□□□□ -0.98
VBP1-202ENST00000460509 KANK4Q5T7N3 995 aaPredicted RBP8.91□□□□□ -0.98
VBP1-202ENST00000460509 LARP1Q6PKG0 1096 aaKnown RBP8.91□□□□□ -0.98
VBP1-202ENST00000460509 PGPEP1Q9NXJ5 209 aa8.91□□□□□ -0.98
VBP1-202ENST00000460509 ATP5J2-PTCD1G3V325 749 aa8.9□□□□□ -0.98
VBP1-202ENST00000460509 SCTRP47872 440 aa8.9□□□□□ -0.98
VBP1-202ENST00000460509 PKDCCQ504Y2 493 aa8.9□□□□□ -0.98
VBP1-202ENST00000460509 ZNF787Q6DD87 383 aa8.9□□□□□ -0.98
VBP1-202ENST00000460509 TRIM50Q86XT4 487 aa8.9□□□□□ -0.98
VBP1-202ENST00000460509 ZNF784Q8NCA9 323 aaPredicted RBP8.9□□□□□ -0.98
VBP1-202ENST00000460509 GTF2IP78347 998 aa8.89□□□□□ -0.99
VBP1-202ENST00000460509 SRPK2P78362 688 aaKnown RBP8.89□□□□□ -0.99
VBP1-202ENST00000460509 PRR20EP86478 221 aa8.89□□□□□ -0.99
VBP1-202ENST00000460509 PRR20CP86479 221 aa8.89□□□□□ -0.99
VBP1-202ENST00000460509 PRR20DP86480 221 aa8.89□□□□□ -0.99
VBP1-202ENST00000460509 PRR20BP86481 221 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms