RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 TMEM132AQ24JP5 1023 aa7.39□□□□□ -1.23
RFC4-211ENST00000460408 HELBQ8NG08 1087 aaPredicted RBP7.39□□□□□ -1.23
RFC4-211ENST00000460408 MAGEB6P1A0A0J9YX57 407 aa7.38□□□□□ -1.23
RFC4-211ENST00000460408 PTSQ03393 145 aa7.38□□□□□ -1.23
RFC4-211ENST00000460408 PDE4DQ08499 809 aa7.38□□□□□ -1.23
RFC4-211ENST00000460408 ERFEQ4G0M1 354 aa7.38□□□□□ -1.23
RFC4-211ENST00000460408 RTL5Q5HYW3 569 aaPredicted RBP7.38□□□□□ -1.23
RFC4-211ENST00000460408 Q6ZVU0 165 aa7.38□□□□□ -1.23
RFC4-211ENST00000460408 NANOS1Q8WY41 292 aaKnown RBP7.38□□□□□ -1.23
RFC4-211ENST00000460408 SUZ12Q15022 739 aaKnown RBP7.37□□□□□ -1.23
RFC4-211ENST00000460408 KCTD17Q8N5Z5 321 aa7.37□□□□□ -1.23
RFC4-211ENST00000460408 SPINT1O43278 529 aa7.36□□□□□ -1.23
RFC4-211ENST00000460408 PPP1R26Q5T8A7 1209 aaPredicted RBP7.36□□□□□ -1.23
RFC4-211ENST00000460408 CNTNAP3BQ96NU0 1288 aa7.36□□□□□ -1.23
RFC4-211ENST00000460408 CARD14Q9BXL6 1004 aa7.36□□□□□ -1.23
RFC4-211ENST00000460408 CNTNAP3Q9BZ76 1288 aa7.36□□□□□ -1.23
RFC4-211ENST00000460408 GPBP1L1Q9HC44 474 aaPredicted RBP7.36□□□□□ -1.23
RFC4-211ENST00000460408 PGPEP1Q9NXJ5 209 aa7.36□□□□□ -1.23
RFC4-211ENST00000460408 CLK2P49760 499 aaKnown RBP7.35□□□□□ -1.23
RFC4-211ENST00000460408 CBLBQ13191 982 aa7.35□□□□□ -1.23
RFC4-211ENST00000460408 TMEM151AQ8N4L1 468 aa7.35□□□□□ -1.23
RFC4-211ENST00000460408 COL25A1Q9BXS0 654 aaPredicted RBP7.35□□□□□ -1.23
RFC4-211ENST00000460408 ADAMTS8Q9UP79 889 aa7.35□□□□□ -1.23
RFC4-211ENST00000460408 FIGNL2A6NMB9 653 aa7.34□□□□□ -1.23
RFC4-211ENST00000460408 RASSF7Q02833 373 aa7.34□□□□□ -1.23
RFC4-211ENST00000460408 PDXDC2PQ6P474 469 aa7.34□□□□□ -1.23
RFC4-211ENST00000460408 CCDC155Q8N6L0 562 aa7.34□□□□□ -1.23
RFC4-211ENST00000460408 KDM4CQ9H3R0 1056 aa7.34□□□□□ -1.23
RFC4-211ENST00000460408 CDV3Q9UKY7 258 aaKnown RBP7.34□□□□□ -1.23
RFC4-211ENST00000460408 SLC35F4A4IF30 521 aa7.33□□□□□ -1.24
RFC4-211ENST00000460408 RNF225M0QZC1 329 aaPredicted RBP7.33□□□□□ -1.24
RFC4-211ENST00000460408 GDF11O95390 407 aa7.33□□□□□ -1.24
RFC4-211ENST00000460408 CTDSPL2Q05D32 466 aa7.32□□□□□ -1.24
RFC4-211ENST00000460408 RNFT1Q5M7Z0 435 aa7.32□□□□□ -1.24
RFC4-211ENST00000460408 ZNF385CQ66K41 422 aaPredicted RBP7.32□□□□□ -1.24
RFC4-211ENST00000460408 KCTD15Q96SI1 283 aaPredicted RBP7.32□□□□□ -1.24
RFC4-211ENST00000460408 ARHGAP9Q9BRR9 750 aa7.32□□□□□ -1.24
RFC4-211ENST00000460408 RSPH6AQ9H0K4 717 aa7.32□□□□□ -1.24
RFC4-211ENST00000460408 SLURP2P0DP57 97 aa7.31□□□□□ -1.24
RFC4-211ENST00000460408 DHX9Q08211 1270 aaKnown RBP7.31□□□□□ -1.24
RFC4-211ENST00000460408 FKBPLQ9UIM3 349 aa7.31□□□□□ -1.24
RFC4-211ENST00000460408 ZC3H4Q9UPT8 1303 aaKnown RBP7.3□□□□□ -1.24
RFC4-211ENST00000460408 ITGA6P23229 1130 aa7.3□□□□□ -1.24
RFC4-211ENST00000460408 SLC10A4Q96EP9 437 aa7.3□□□□□ -1.24
RFC4-211ENST00000460408 CTSOP43234 321 aaPredicted RBP7.29□□□□□ -1.24
RFC4-211ENST00000460408 VWA5B2Q8N398 1253 aa7.29□□□□□ -1.24
RFC4-211ENST00000460408 POLR3EQ9NVU0 708 aa7.29□□□□□ -1.24
RFC4-211ENST00000460408 ARHGEF15O94989 841 aa7.28□□□□□ -1.24
RFC4-211ENST00000460408 INTS6LQ5JSJ4 861 aaKnown RBP7.28□□□□□ -1.24
RFC4-211ENST00000460408 SV2AQ7L0J3 742 aa7.28□□□□□ -1.24
RFC4-211ENST00000460408 ZBTB33Q86T24 672 aa7.28□□□□□ -1.24
RFC4-211ENST00000460408 SVOPQ8N4V2 548 aa7.28□□□□□ -1.24
RFC4-211ENST00000460408 WHAMMQ8TF30 809 aa7.28□□□□□ -1.24
RFC4-211ENST00000460408 LRRN4Q8WUT4 740 aa7.28□□□□□ -1.24
RFC4-211ENST00000460408 AGBL1Q96MI9 1066 aa7.28□□□□□ -1.24
RFC4-211ENST00000460408 INSM2Q96T92 566 aaPredicted RBP7.28□□□□□ -1.24
RFC4-211ENST00000460408 RNF217Q8TC41 542 aa7.27□□□□□ -1.25
RFC4-211ENST00000460408 OCSTAMPQ9BR26 566 aa7.27□□□□□ -1.25
RFC4-211ENST00000460408 FAM117AQ9C073 453 aa7.27□□□□□ -1.25
RFC4-211ENST00000460408 GPSM3Q9Y4H4 160 aa7.27□□□□□ -1.25
RFC4-211ENST00000460408 SENP3-EIF4A1A0A087X0R7 540 aa7.26□□□□□ -1.25
RFC4-211ENST00000460408 RELBQ01201 579 aa7.26□□□□□ -1.25
RFC4-211ENST00000460408 CDC14CA4D256 554 aa7.25□□□□□ -1.25
RFC4-211ENST00000460408 PTK2Q05397 1052 aa7.25□□□□□ -1.25
RFC4-211ENST00000460408 NR6A1Q15406 480 aa7.25□□□□□ -1.25
RFC4-211ENST00000460408 IL27Q8NEV9 243 aa7.25□□□□□ -1.25
RFC4-211ENST00000460408 POLMQ9NP87 494 aaPredicted RBP7.25□□□□□ -1.25
RFC4-211ENST00000460408 GTF3C3Q9Y5Q9 886 aa7.25□□□□□ -1.25
RFC4-211ENST00000460408 FBXO31Q5XUX0 539 aaPredicted RBP7.24□□□□□ -1.25
RFC4-211ENST00000460408 PPP2R2DQ66LE6 453 aa7.24□□□□□ -1.25
RFC4-211ENST00000460408 ADAM32Q8TC27 787 aa7.24□□□□□ -1.25
RFC4-211ENST00000460408 DNMT3AQ9Y6K1 912 aaPredicted RBP7.24□□□□□ -1.25
RFC4-211ENST00000460408 IRS1P35568 1242 aa7.23□□□□□ -1.25
RFC4-211ENST00000460408 SKIV2LQ15477 1246 aaKnown RBP7.23□□□□□ -1.25
RFC4-211ENST00000460408 NBPF20Q3BBV1 942 aa7.23□□□□□ -1.25
RFC4-211ENST00000460408 KANK3Q6NY19 840 aa7.23□□□□□ -1.25
RFC4-211ENST00000460408 ZNF395Q9H8N7 513 aaPredicted RBP7.23□□□□□ -1.25
RFC4-211ENST00000460408 TMPRSS4Q9NRS4 437 aa7.23□□□□□ -1.25
RFC4-211ENST00000460408 IGHA1P01876 353 aa7.22□□□□□ -1.25
RFC4-211ENST00000460408 ADH1AP07327 375 aa7.22□□□□□ -1.25
RFC4-211ENST00000460408 FOXD4L5Q5VV16 416 aaPredicted RBP7.22□□□□□ -1.25
RFC4-211ENST00000460408 KDF1Q8NAX2 398 aaPredicted RBP7.22□□□□□ -1.25
RFC4-211ENST00000460408 ZNF784Q8NCA9 323 aaPredicted RBP7.22□□□□□ -1.25
RFC4-211ENST00000460408 DDRGK1Q96HY6 314 aa7.22□□□□□ -1.25
RFC4-211ENST00000460408 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.22□□□□□ -1.25
RFC4-211ENST00000460408 LILRA1O75019 489 aa7.21□□□□□ -1.26
RFC4-211ENST00000460408 ADAMTS2O95450 1211 aa7.21□□□□□ -1.26
RFC4-211ENST00000460408 PTGIRP43119 386 aa7.21□□□□□ -1.26
RFC4-211ENST00000460408 MARSP56192 900 aaKnown RBP7.21□□□□□ -1.26
RFC4-211ENST00000460408 SRSF11Q05519 484 aaKnown RBP7.21□□□□□ -1.26
RFC4-211ENST00000460408 LYPD4Q6UWN0 246 aa7.21□□□□□ -1.26
RFC4-211ENST00000460408 SCARF2Q96GP6 870 aaPredicted RBP7.21□□□□□ -1.26
RFC4-211ENST00000460408 ESPNB1AK53 854 aa7.2□□□□□ -1.26
RFC4-211ENST00000460408 ADD1P35611 737 aaKnown RBP7.2□□□□□ -1.26
RFC4-211ENST00000460408 FOXK2Q01167 660 aa7.2□□□□□ -1.26
RFC4-211ENST00000460408 SH3D19Q5HYK7 790 aa7.2□□□□□ -1.26
RFC4-211ENST00000460408 ERVH48-1M5A8F1 160 aa7.19□□□□□ -1.26
RFC4-211ENST00000460408 GAS6Q14393 721 aa7.19□□□□□ -1.26
RFC4-211ENST00000460408 GPAT2Q6NUI2 795 aa7.19□□□□□ -1.26
RFC4-211ENST00000460408 LYSMD3Q7Z3D4 306 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms