RNA–Protein interactions for RNA: ENST00000460119.1

PDE6B-203, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-203ENST00000460119 PROM2Q8N271 834 aa31.04■■■□□ 2.56
PDE6B-203ENST00000460119 KCNQ2O43526 872 aa31.03■■■□□ 2.56
PDE6B-203ENST00000460119 CARD10Q9BWT7 1032 aa31.03■■■□□ 2.56
PDE6B-203ENST00000460119 SPON1Q9HCB6 807 aa31.03■■■□□ 2.56
PDE6B-203ENST00000460119 ANO8Q9HCE9 1232 aaPredicted RBP31.03■■■□□ 2.56
PDE6B-203ENST00000460119 CPSF1Q10570 1443 aaKnown RBP31.03■■■□□ 2.56
PDE6B-203ENST00000460119 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.02■■■□□ 2.56
PDE6B-203ENST00000460119 PDGFDQ9GZP0 370 aaPredicted RBP31.01■■■□□ 2.55
PDE6B-203ENST00000460119 TTC21AQ8NDW8 1320 aa31■■■□□ 2.55
PDE6B-203ENST00000460119 PIK3C2AO00443 1686 aa31■■■□□ 2.55
PDE6B-203ENST00000460119 PPP1R1BQ9UD71 204 aaPredicted RBP31■■■□□ 2.55
PDE6B-203ENST00000460119 PARP4Q9UKK3 1724 aaKnown RBP31■■■□□ 2.55
PDE6B-203ENST00000460119 KTN1Q86UP2 1357 aaKnown RBP31■■■□□ 2.55
PDE6B-203ENST00000460119 NUP188Q5SRE5 1749 aa30.99■■■□□ 2.55
PDE6B-203ENST00000460119 CDCA7Q9BWT1 371 aaPredicted RBP30.99■■■□□ 2.55
PDE6B-203ENST00000460119 RREB1Q92766 1687 aa30.99■■■□□ 2.55
PDE6B-203ENST00000460119 COL18A1P39060 1754 aa30.99■■■□□ 2.55
PDE6B-203ENST00000460119 EXOC5O00471 708 aa30.98■■■□□ 2.55
PDE6B-203ENST00000460119 TRPM1Q7Z4N2 1603 aa30.96■■■□□ 2.55
PDE6B-203ENST00000460119 NME9Q86XW9 330 aa30.96■■■□□ 2.55
PDE6B-203ENST00000460119 PEAK1Q9H792 1746 aa30.95■■■□□ 2.55
PDE6B-203ENST00000460119 TMC1Q8TDI8 760 aa30.94■■■□□ 2.54
PDE6B-203ENST00000460119 LRRC37A3O60309 1634 aa30.94■■■□□ 2.54
PDE6B-203ENST00000460119 CARD11Q9BXL7 1154 aa30.92■■■□□ 2.54
PDE6B-203ENST00000460119 SLC12A5Q9H2X9 1139 aa30.92■■■□□ 2.54
PDE6B-203ENST00000460119 ZBTB7AO95365 584 aa30.91■■■□□ 2.54
PDE6B-203ENST00000460119 TXNRD1Q16881 649 aa30.91■■■□□ 2.54
PDE6B-203ENST00000460119 NLRP2Q9NX02 1062 aa30.9■■■□□ 2.54
PDE6B-203ENST00000460119 ACSBG1Q96GR2 724 aa30.89■■■□□ 2.54
PDE6B-203ENST00000460119 YY1P25490 414 aa30.88■■■□□ 2.53
PDE6B-203ENST00000460119 NFAT5O94916 1531 aa30.88■■■□□ 2.53
PDE6B-203ENST00000460119 ATF5Q9Y2D1 282 aaPredicted RBP30.87■■■□□ 2.53
PDE6B-203ENST00000460119 BCL9O00512 1426 aa30.87■■■□□ 2.53
PDE6B-203ENST00000460119 USP31Q70CQ4 1352 aa30.86■■■□□ 2.53
PDE6B-203ENST00000460119 CCDC7Q96M83 1385 aa30.86■■■□□ 2.53
PDE6B-203ENST00000460119 SBNO2Q9Y2G9 1366 aa30.84■■■□□ 2.53
PDE6B-203ENST00000460119 STK32BQ9NY57 414 aa30.84■■■□□ 2.53
PDE6B-203ENST00000460119 CD163L1Q9NR16 1453 aa30.82■■■□□ 2.53
PDE6B-203ENST00000460119 HDGFL2Q7Z4V5 671 aaPredicted RBP30.82■■■□□ 2.52
PDE6B-203ENST00000460119 ANKRD24Q8TF21 1146 aa30.82■■■□□ 2.52
PDE6B-203ENST00000460119 ERBB3P21860 1342 aa30.81■■■□□ 2.52
PDE6B-203ENST00000460119 SLC15A2Q16348 729 aa30.81■■■□□ 2.52
PDE6B-203ENST00000460119 RGPD5Q99666 1765 aa30.81■■■□□ 2.52
PDE6B-203ENST00000460119 AKAP12Q02952 1782 aa30.8■■■□□ 2.52
PDE6B-203ENST00000460119 PTGER2P43116 358 aa30.8■■■□□ 2.52
PDE6B-203ENST00000460119 SBF2Q86WG5 1849 aa30.8■■■□□ 2.52
PDE6B-203ENST00000460119 IL2RBP14784 551 aa30.79■■■□□ 2.52
PDE6B-203ENST00000460119 NINLQ9Y2I6 1382 aa30.78■■■□□ 2.52
PDE6B-203ENST00000460119 DCAF8L1A6NGE4 600 aa30.77■■■□□ 2.52
PDE6B-203ENST00000460119 LTV1Q96GA3 475 aaPredicted RBP30.76■■■□□ 2.51
PDE6B-203ENST00000460119 TNS2Q63HR2 1409 aa30.75■■■□□ 2.51
PDE6B-203ENST00000460119 FBLN1P23142 703 aa30.74■■■□□ 2.51
PDE6B-203ENST00000460119 TERF2IPQ9NYB0 399 aa30.74■■■□□ 2.51
PDE6B-203ENST00000460119 A0A1W2PP64 1363 aa30.71■■■□□ 2.51
PDE6B-203ENST00000460119 WNK3Q9BYP7 1800 aa30.7■■■□□ 2.51
PDE6B-203ENST00000460119 DDX54Q8TDD1 881 aaKnown RBP30.7■■■□□ 2.51
PDE6B-203ENST00000460119 IP6K1Q92551 441 aa30.7■■■□□ 2.51
PDE6B-203ENST00000460119 EDC4Q6P2E9 1401 aaKnown RBP30.69■■■□□ 2.5
PDE6B-203ENST00000460119 RGPD3A6NKT7 1758 aaPredicted RBP30.69■■■□□ 2.5
PDE6B-203ENST00000460119 RGPD4Q7Z3J3 1758 aa30.69■■■□□ 2.5
PDE6B-203ENST00000460119 TONSLQ96HA7 1378 aa30.68■■■□□ 2.5
PDE6B-203ENST00000460119 FHDC1Q9C0D6 1143 aaPredicted RBP30.68■■■□□ 2.5
PDE6B-203ENST00000460119 LRRC4BQ9NT99 713 aa30.68■■■□□ 2.5
PDE6B-203ENST00000460119 CASZ1Q86V15 1759 aa30.68■■■□□ 2.5
PDE6B-203ENST00000460119 MON2Q7Z3U7 1717 aa30.67■■■□□ 2.5
PDE6B-203ENST00000460119 ST20-MTHFSA0A0A6YYL1 179 aa30.67■■■□□ 2.5
PDE6B-203ENST00000460119 TESK2Q96S53 571 aa30.67■■■□□ 2.5
PDE6B-203ENST00000460119 SYT17Q9BSW7 474 aa30.67■■■□□ 2.5
PDE6B-203ENST00000460119 MTFR1LQ9H019 292 aa30.67■■■□□ 2.5
PDE6B-203ENST00000460119 ABCC6O95255 1503 aa30.67■■■□□ 2.5
PDE6B-203ENST00000460119 ZNF827Q17R98 1081 aa30.66■■■□□ 2.5
PDE6B-203ENST00000460119 PUS7Q96PZ0 661 aaKnown RBP30.65■■■□□ 2.5
PDE6B-203ENST00000460119 SGIP1Q9BQI5 828 aa30.65■■■□□ 2.5
PDE6B-203ENST00000460119 KCNQ4P56696 695 aa30.62■■■□□ 2.49
PDE6B-203ENST00000460119 MAP3K19Q56UN5 1328 aa30.61■■■□□ 2.49
PDE6B-203ENST00000460119 COG3Q96JB2 828 aa30.6■■■□□ 2.49
PDE6B-203ENST00000460119 HOXC9P31274 260 aa30.58■■■□□ 2.49
PDE6B-203ENST00000460119 AMPHP49418 695 aa30.58■■■□□ 2.49
PDE6B-203ENST00000460119 PRIM1P49642 420 aaKnown RBP30.58■■■□□ 2.49
PDE6B-203ENST00000460119 ARXQ96QS3 562 aa30.58■■■□□ 2.49
PDE6B-203ENST00000460119 SYTL4Q96C24 671 aaPredicted RBP30.57■■■□□ 2.48
PDE6B-203ENST00000460119 MYOM1P52179 1685 aa30.57■■■□□ 2.48
PDE6B-203ENST00000460119 NHSQ6T4R5 1651 aa30.55■■■□□ 2.48
PDE6B-203ENST00000460119 AKT1S1Q96B36 256 aa30.55■■■□□ 2.48
PDE6B-203ENST00000460119 USP54Q70EL1 1684 aa30.55■■■□□ 2.48
PDE6B-203ENST00000460119 RRS1Q15050 365 aaKnown RBP30.53■■■□□ 2.48
PDE6B-203ENST00000460119 LTN1O94822 1766 aa30.52■■■□□ 2.48
PDE6B-203ENST00000460119 GGNBP2Q9H3C7 697 aa30.52■■■□□ 2.48
PDE6B-203ENST00000460119 ZCRB1Q8TBF4 217 aaKnown RBP30.51■■■□□ 2.47
PDE6B-203ENST00000460119 NBPF6Q5VWK0 638 aa30.5■■■□□ 2.47
PDE6B-203ENST00000460119 USHBP1Q8N6Y0 703 aa30.5■■■□□ 2.47
PDE6B-203ENST00000460119 NBPF4Q96M43 638 aa30.5■■■□□ 2.47
PDE6B-203ENST00000460119 FYB1O15117 783 aa30.49■■■□□ 2.47
PDE6B-203ENST00000460119 SLC27A3Q5K4L6 730 aa30.49■■■□□ 2.47
PDE6B-203ENST00000460119 ZNF784Q8NCA9 323 aaPredicted RBP30.49■■■□□ 2.47
PDE6B-203ENST00000460119 KLHL34Q8N239 644 aa30.47■■■□□ 2.47
PDE6B-203ENST00000460119 TFCP2L1Q9NZI6 479 aa30.47■■■□□ 2.47
PDE6B-203ENST00000460119 PNPLA7Q6ZV29 1317 aa30.47■■■□□ 2.47
PDE6B-203ENST00000460119 PAPPAQ13219 1627 aa30.46■■■□□ 2.47
PDE6B-203ENST00000460119 BTAF1O14981 1849 aa30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms