RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 ZNF287Q9HBT7 754 aa10.48□□□□□ -0.73
SHROOM4-203ENST00000460112 CRBNQ96SW2 442 aa10.48□□□□□ -0.73
SHROOM4-203ENST00000460112 FAM107BQ9H098 131 aa10.48□□□□□ -0.73
SHROOM4-203ENST00000460112 CC2D2AQ9P2K1 1620 aa10.48□□□□□ -0.73
SHROOM4-203ENST00000460112 TIAM1Q13009 1591 aa10.48□□□□□ -0.73
SHROOM4-203ENST00000460112 PPP4R3AQ6IN85 833 aa10.48□□□□□ -0.73
SHROOM4-203ENST00000460112 PNISRQ8TF01 805 aaKnown RBP10.48□□□□□ -0.73
SHROOM4-203ENST00000460112 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.48□□□□□ -0.73
SHROOM4-203ENST00000460112 MPHOSPH10O00566 681 aaKnown RBP10.48□□□□□ -0.73
SHROOM4-203ENST00000460112 CCDC69A6NI79 296 aa10.48□□□□□ -0.73
SHROOM4-203ENST00000460112 CCDC192P0DO97 292 aa10.48□□□□□ -0.73
SHROOM4-203ENST00000460112 BCL2L13Q9BXK5 485 aa10.47□□□□□ -0.73
SHROOM4-203ENST00000460112 NLRP2Q9NX02 1062 aa10.47□□□□□ -0.73
SHROOM4-203ENST00000460112 PLEKHH1Q9ULM0 1364 aa10.47□□□□□ -0.73
SHROOM4-203ENST00000460112 TDRD9Q8NDG6 1382 aaKnown RBP10.47□□□□□ -0.73
SHROOM4-203ENST00000460112 MCM3P25205 808 aa10.46□□□□□ -0.73
SHROOM4-203ENST00000460112 FOSBP53539 338 aa10.46□□□□□ -0.73
SHROOM4-203ENST00000460112 PPM1EQ8WY54 764 aa10.46□□□□□ -0.73
SHROOM4-203ENST00000460112 CCDC97Q96F63 343 aaPredicted RBP10.46□□□□□ -0.73
SHROOM4-203ENST00000460112 ATAD2BQ9ULI0 1458 aa10.46□□□□□ -0.73
SHROOM4-203ENST00000460112 ZNF397Q8NF99 534 aaPredicted RBP10.46□□□□□ -0.73
SHROOM4-203ENST00000460112 CEP131Q9UPN4 1083 aa10.46□□□□□ -0.73
SHROOM4-203ENST00000460112 MCM5P33992 734 aa10.46□□□□□ -0.74
SHROOM4-203ENST00000460112 GOLGA6L10A0A0M3HER8 536 aa10.46□□□□□ -0.74
SHROOM4-203ENST00000460112 SERPINC1P01008 464 aa10.46□□□□□ -0.74
SHROOM4-203ENST00000460112 TTLL5Q6EMB2 1281 aa10.46□□□□□ -0.74
SHROOM4-203ENST00000460112 SRCIN1Q9C0H9 1055 aa10.46□□□□□ -0.74
SHROOM4-203ENST00000460112 CCDC150Q8NCX0 1101 aa10.45□□□□□ -0.74
SHROOM4-203ENST00000460112 CNNM1Q9NRU3 951 aa10.45□□□□□ -0.74
SHROOM4-203ENST00000460112 ARHGAP5Q13017 1502 aa10.45□□□□□ -0.74
SHROOM4-203ENST00000460112 CCDC141Q6ZP82 1450 aa10.45□□□□□ -0.74
SHROOM4-203ENST00000460112 TANGO6Q9C0B7 1094 aa10.45□□□□□ -0.74
SHROOM4-203ENST00000460112 MATR3P43243 847 aaKnown RBP eCLIP10.45□□□□□ -0.74
SHROOM4-203ENST00000460112 TUBB4BP68371 445 aa10.45□□□□□ -0.74
SHROOM4-203ENST00000460112 GCC1Q96CN9 775 aa10.45□□□□□ -0.74
SHROOM4-203ENST00000460112 NF2P35240 595 aa10.44□□□□□ -0.74
SHROOM4-203ENST00000460112 CCT4P50991 539 aaKnown RBP10.44□□□□□ -0.74
SHROOM4-203ENST00000460112 GIGYF2Q6Y7W6 1299 aaKnown RBP10.44□□□□□ -0.74
SHROOM4-203ENST00000460112 THOC2Q8NI27 1593 aaKnown RBP10.44□□□□□ -0.74
SHROOM4-203ENST00000460112 CTNNA3Q9UI47 895 aa10.44□□□□□ -0.74
SHROOM4-203ENST00000460112 NECTIN2Q92692 538 aa10.44□□□□□ -0.74
SHROOM4-203ENST00000460112 TAF4BQ92750 862 aa10.44□□□□□ -0.74
SHROOM4-203ENST00000460112 CYP46A1Q9Y6A2 500 aa10.44□□□□□ -0.74
SHROOM4-203ENST00000460112 KANK4Q5T7N3 995 aaPredicted RBP10.44□□□□□ -0.74
SHROOM4-203ENST00000460112 ANKRD18BA2A2Z9 1011 aa10.44□□□□□ -0.74
SHROOM4-203ENST00000460112 HMGB1P09429 215 aaKnown RBP10.44□□□□□ -0.74
SHROOM4-203ENST00000460112 VPS36Q86VN1 386 aa10.44□□□□□ -0.74
SHROOM4-203ENST00000460112 DNAJC2Q99543 621 aaKnown RBP10.44□□□□□ -0.74
SHROOM4-203ENST00000460112 EPB41L2O43491 1005 aaKnown RBP10.44□□□□□ -0.74
SHROOM4-203ENST00000460112 GRIPAP1Q4V328 841 aa10.44□□□□□ -0.74
SHROOM4-203ENST00000460112 HMGXB3Q12766 1538 aa10.44□□□□□ -0.74
SHROOM4-203ENST00000460112 PEG3Q9GZU2 1588 aa10.43□□□□□ -0.74
SHROOM4-203ENST00000460112 GAPVD1Q14C86 1478 aa10.43□□□□□ -0.74
SHROOM4-203ENST00000460112 CFAP45Q9UL16 551 aa10.43□□□□□ -0.74
SHROOM4-203ENST00000460112 GNAI2P04899 355 aa10.43□□□□□ -0.74
SHROOM4-203ENST00000460112 ANAPC15P60006 121 aa10.43□□□□□ -0.74
SHROOM4-203ENST00000460112 TMOD2Q9NZR1 351 aa10.43□□□□□ -0.74
SHROOM4-203ENST00000460112 AIMP1Q12904 312 aaKnown RBP10.43□□□□□ -0.74
SHROOM4-203ENST00000460112 LRRCC1Q9C099 1032 aa10.43□□□□□ -0.74
SHROOM4-203ENST00000460112 EHMT1Q9H9B1 1298 aa10.43□□□□□ -0.74
SHROOM4-203ENST00000460112 CEP57L1Q8IYX8 460 aa10.43□□□□□ -0.74
SHROOM4-203ENST00000460112 WDR33Q9C0J8 1336 aaKnown RBP10.43□□□□□ -0.74
SHROOM4-203ENST00000460112 KRT32Q14532 448 aa10.43□□□□□ -0.74
SHROOM4-203ENST00000460112 CCDC148Q8NFR7 591 aa10.43□□□□□ -0.74
SHROOM4-203ENST00000460112 SMTNL1A8MU46 457 aa10.42□□□□□ -0.74
SHROOM4-203ENST00000460112 GBP3Q9H0R5 595 aa10.42□□□□□ -0.74
SHROOM4-203ENST00000460112 PHAXQ9H814 394 aaKnown RBP10.42□□□□□ -0.74
SHROOM4-203ENST00000460112 PLIN1O60240 522 aa10.42□□□□□ -0.74
SHROOM4-203ENST00000460112 GIMAP7Q8NHV1 300 aa10.42□□□□□ -0.74
SHROOM4-203ENST00000460112 PLCD4Q9BRC7 762 aa10.42□□□□□ -0.74
SHROOM4-203ENST00000460112 AQRO60306 1485 aaKnown RBP eCLIP10.42□□□□□ -0.74
SHROOM4-203ENST00000460112 BRPF1P55201 1214 aaPredicted RBP10.42□□□□□ -0.74
SHROOM4-203ENST00000460112 SPG7Q9UQ90 795 aa10.42□□□□□ -0.74
SHROOM4-203ENST00000460112 APAF1O14727 1248 aa10.42□□□□□ -0.74
SHROOM4-203ENST00000460112 TATP17735 454 aaPredicted RBP10.42□□□□□ -0.74
SHROOM4-203ENST00000460112 MAP9Q49MG5 647 aa10.42□□□□□ -0.74
SHROOM4-203ENST00000460112 ZNF76P36508 570 aa10.42□□□□□ -0.74
SHROOM4-203ENST00000460112 TNMDQ9H2S6 317 aa10.42□□□□□ -0.74
SHROOM4-203ENST00000460112 IMMTQ16891 758 aaKnown RBP10.41□□□□□ -0.74
SHROOM4-203ENST00000460112 SEPT11Q9NVA2 429 aaKnown RBP10.41□□□□□ -0.74
SHROOM4-203ENST00000460112 FGFR1OPO95684 399 aaKnown RBP10.41□□□□□ -0.74
SHROOM4-203ENST00000460112 EXOC6Q8TAG9 804 aa10.41□□□□□ -0.74
SHROOM4-203ENST00000460112 SEC63Q9UGP8 760 aaKnown RBP10.41□□□□□ -0.74
SHROOM4-203ENST00000460112 FANCD2Q9BXW9 1451 aa10.41□□□□□ -0.74
SHROOM4-203ENST00000460112 JPH4Q96JJ6 628 aa10.41□□□□□ -0.74
SHROOM4-203ENST00000460112 TAX1BP1Q86VP1 789 aa10.41□□□□□ -0.74
SHROOM4-203ENST00000460112 ATP2B2Q01814 1243 aa10.41□□□□□ -0.74
SHROOM4-203ENST00000460112 UBAC1Q9BSL1 405 aa10.41□□□□□ -0.74
SHROOM4-203ENST00000460112 KRT85P78386 507 aa10.41□□□□□ -0.74
SHROOM4-203ENST00000460112 DDX12PQ92771 950 aa10.41□□□□□ -0.74
SHROOM4-203ENST00000460112 MPHOSPH8Q99549 860 aa10.41□□□□□ -0.74
SHROOM4-203ENST00000460112 MTMR7Q9Y216 660 aa10.41□□□□□ -0.74
SHROOM4-203ENST00000460112 CTTNBP2Q8WZ74 1663 aa10.4□□□□□ -0.74
SHROOM4-203ENST00000460112 ZSCAN31Q96LW9 406 aaPredicted RBP10.4□□□□□ -0.74
SHROOM4-203ENST00000460112 FERMT1Q9BQL6 677 aa10.4□□□□□ -0.74
SHROOM4-203ENST00000460112 GCOM1H8Y6P7 765 aaPredicted RBP10.4□□□□□ -0.74
SHROOM4-203ENST00000460112 MYZAPP0CAP1 466 aa10.4□□□□□ -0.74
SHROOM4-203ENST00000460112 KIF20AO95235 890 aa10.4□□□□□ -0.74
SHROOM4-203ENST00000460112 NFKBIBQ15653 356 aa10.4□□□□□ -0.74
SHROOM4-203ENST00000460112 RBM5P52756 815 aaKnown RBP eCLIP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms