RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 BAG6P46379 1132 aa29.4■■■□□ 2.3
SRM-202ENST00000459997 NME9Q86XW9 330 aa29.4■■■□□ 2.3
SRM-202ENST00000459997 AXIN2Q9Y2T1 843 aa29.4■■■□□ 2.3
SRM-202ENST00000459997 RGPD5Q99666 1765 aa29.39■■■□□ 2.3
SRM-202ENST00000459997 PDE3BQ13370 1112 aa29.39■■■□□ 2.3
SRM-202ENST00000459997 PARP4Q9UKK3 1724 aaKnown RBP29.39■■■□□ 2.3
SRM-202ENST00000459997 CLSPNQ9HAW4 1339 aa29.39■■■□□ 2.3
SRM-202ENST00000459997 TNS1Q9HBL0 1735 aaKnown RBP29.38■■■□□ 2.29
SRM-202ENST00000459997 FAM196AQ6ZSG2 479 aa29.38■■■□□ 2.29
SRM-202ENST00000459997 TOM1L2Q6ZVM7 507 aa29.38■■■□□ 2.29
SRM-202ENST00000459997 NINLQ9Y2I6 1382 aa29.38■■■□□ 2.29
SRM-202ENST00000459997 TIMELESSQ9UNS1 1208 aa29.36■■■□□ 2.29
SRM-202ENST00000459997 WDR17Q8IZU2 1322 aa29.36■■■□□ 2.29
SRM-202ENST00000459997 ABCC6O95255 1503 aa29.35■■■□□ 2.29
SRM-202ENST00000459997 WNK3Q9BYP7 1800 aa29.33■■■□□ 2.29
SRM-202ENST00000459997 TRIM37O94972 964 aa29.32■■■□□ 2.28
SRM-202ENST00000459997 CSB-PGBD3P0DP91 1061 aa29.32■■■□□ 2.28
SRM-202ENST00000459997 LTN1O94822 1766 aa29.31■■■□□ 2.28
SRM-202ENST00000459997 LRRC37A3O60309 1634 aa29.31■■■□□ 2.28
SRM-202ENST00000459997 TMF1P82094 1093 aa29.31■■■□□ 2.28
SRM-202ENST00000459997 EN1Q05925 392 aaPredicted RBP29.31■■■□□ 2.28
SRM-202ENST00000459997 DISP2A7MBM2 1401 aa29.3■■■□□ 2.28
SRM-202ENST00000459997 OVOS2A0A0J9YW53 1432 aa29.28■■■□□ 2.28
SRM-202ENST00000459997 OVOS2Q6IE36 1432 aa29.28■■■□□ 2.28
SRM-202ENST00000459997 CARD10Q9BWT7 1032 aa29.26■■■□□ 2.27
SRM-202ENST00000459997 ANKRD36BQ8N2N9 1353 aa29.26■■■□□ 2.27
SRM-202ENST00000459997 DDB1Q16531 1140 aa29.25■■■□□ 2.27
SRM-202ENST00000459997 PEAK1Q9H792 1746 aa29.23■■■□□ 2.27
SRM-202ENST00000459997 OVOS2A0A0G2JMS6 1433 aa29.23■■■□□ 2.27
SRM-202ENST00000459997 APBA3O96018 575 aa29.23■■■□□ 2.27
SRM-202ENST00000459997 CDCA7Q9BWT1 371 aaPredicted RBP29.23■■■□□ 2.27
SRM-202ENST00000459997 SRCAPQ6ZRS2 3230 aa29.22■■■□□ 2.27
SRM-202ENST00000459997 EZH2Q15910 746 aaKnown RBP29.21■■■□□ 2.27
SRM-202ENST00000459997 CDCA8Q53HL2 280 aa29.21■■■□□ 2.27
SRM-202ENST00000459997 CCDC7Q96M83 1385 aa29.21■■■□□ 2.27
SRM-202ENST00000459997 ERBB3P21860 1342 aa29.2■■■□□ 2.27
SRM-202ENST00000459997 C11orf95C9JLR9 678 aaPredicted RBP29.2■■■□□ 2.26
SRM-202ENST00000459997 CCER1Q8TC90 406 aaPredicted RBP29.2■■■□□ 2.26
SRM-202ENST00000459997 COG3Q96JB2 828 aa29.2■■■□□ 2.26
SRM-202ENST00000459997 CAMKK2Q96RR4 588 aa29.19■■■□□ 2.26
SRM-202ENST00000459997 PSDA5PKW4 1024 aaPredicted RBP29.17■■■□□ 2.26
SRM-202ENST00000459997 NLRP2Q9NX02 1062 aa29.17■■■□□ 2.26
SRM-202ENST00000459997 PARD3Q8TEW0 1356 aa29.16■■■□□ 2.26
SRM-202ENST00000459997 ANKRD24Q8TF21 1146 aa29.16■■■□□ 2.26
SRM-202ENST00000459997 SBF2Q86WG5 1849 aa29.15■■■□□ 2.26
SRM-202ENST00000459997 MYOM1P52179 1685 aa29.15■■■□□ 2.26
SRM-202ENST00000459997 MARCH10Q8NA82 808 aaPredicted RBP29.14■■■□□ 2.26
SRM-202ENST00000459997 RREB1Q92766 1687 aa29.14■■■□□ 2.26
SRM-202ENST00000459997 EXOC5O00471 708 aa29.12■■■□□ 2.25
SRM-202ENST00000459997 IP6K1Q92551 441 aa29.12■■■□□ 2.25
SRM-202ENST00000459997 TNS2Q63HR2 1409 aa29.11■■■□□ 2.25
SRM-202ENST00000459997 KIF20BQ96Q89 1820 aa29.1■■■□□ 2.25
SRM-202ENST00000459997 FYB1O15117 783 aa29.1■■■□□ 2.25
SRM-202ENST00000459997 NUP188Q5SRE5 1749 aa29.1■■■□□ 2.25
SRM-202ENST00000459997 MAP3K19Q56UN5 1328 aa29.1■■■□□ 2.25
SRM-202ENST00000459997 FAM208AQ9UK61 1670 aaKnown RBP29.09■■■□□ 2.25
SRM-202ENST00000459997 R3HDM1Q15032 1099 aaKnown RBP29.09■■■□□ 2.25
SRM-202ENST00000459997 GGNBP2Q9H3C7 697 aa29.09■■■□□ 2.25
SRM-202ENST00000459997 FBLN1P23142 703 aa29.08■■■□□ 2.25
SRM-202ENST00000459997 BCL9O00512 1426 aa29.08■■■□□ 2.25
SRM-202ENST00000459997 IL2RBP14784 551 aa29.07■■■□□ 2.24
SRM-202ENST00000459997 LTV1Q96GA3 475 aaPredicted RBP29.07■■■□□ 2.24
SRM-202ENST00000459997 LRP5O75197 1615 aa29.06■■■□□ 2.24
SRM-202ENST00000459997 AMPHP49418 695 aa29.06■■■□□ 2.24
SRM-202ENST00000459997 HOXC9P31274 260 aa29.05■■■□□ 2.24
SRM-202ENST00000459997 BCL11BQ9C0K0 894 aaPredicted RBP29.05■■■□□ 2.24
SRM-202ENST00000459997 RGPD3A6NKT7 1758 aaPredicted RBP29.05■■■□□ 2.24
SRM-202ENST00000459997 RGPD4Q7Z3J3 1758 aa29.05■■■□□ 2.24
SRM-202ENST00000459997 PTF1AQ7RTS3 328 aa29.04■■■□□ 2.24
SRM-202ENST00000459997 NSD3Q9BZ95 1437 aa29.03■■■□□ 2.24
SRM-202ENST00000459997 RTL1A6NKG5 1358 aa29.02■■■□□ 2.24
SRM-202ENST00000459997 RRS1Q15050 365 aaKnown RBP29.02■■■□□ 2.24
SRM-202ENST00000459997 CARD14Q9BXL6 1004 aa29.02■■■□□ 2.24
SRM-202ENST00000459997 PLSCR1O15162 318 aa29■■■□□ 2.23
SRM-202ENST00000459997 EIF4G2P78344 907 aaKnown RBP eCLIP29■■■□□ 2.23
SRM-202ENST00000459997 NBPF14Q5TI25 921 aa28.99■■■□□ 2.23
SRM-202ENST00000459997 POLR3GLQ9BT43 218 aa28.99■■■□□ 2.23
SRM-202ENST00000459997 RGPD2P0DJD1 1756 aa28.98■■■□□ 2.23
SRM-202ENST00000459997 NHSQ6T4R5 1651 aa28.97■■■□□ 2.23
SRM-202ENST00000459997 HSPA5P11021 654 aaKnown RBP28.97■■■□□ 2.23
SRM-202ENST00000459997 KCNQ2O43526 872 aa28.93■■■□□ 2.22
SRM-202ENST00000459997 ACSBG1Q96GR2 724 aa28.93■■■□□ 2.22
SRM-202ENST00000459997 SMG6Q86US8 1419 aaKnown RBP28.93■■■□□ 2.22
SRM-202ENST00000459997 FLT4P35916 1363 aa28.9■■■□□ 2.22
SRM-202ENST00000459997 CGNL1Q0VF96 1302 aa28.9■■■□□ 2.22
SRM-202ENST00000459997 KIF24Q5T7B8 1368 aa28.89■■■□□ 2.22
SRM-202ENST00000459997 DDX54Q8TDD1 881 aaKnown RBP28.89■■■□□ 2.22
SRM-202ENST00000459997 INSRP06213 1382 aa28.88■■■□□ 2.21
SRM-202ENST00000459997 HSP90AB2PQ58FF8 381 aa28.88■■■□□ 2.21
SRM-202ENST00000459997 NBPF6Q5VWK0 638 aa28.88■■■□□ 2.21
SRM-202ENST00000459997 PROM2Q8N271 834 aa28.88■■■□□ 2.21
SRM-202ENST00000459997 NBPF4Q96M43 638 aa28.88■■■□□ 2.21
SRM-202ENST00000459997 MEGF6O75095 1541 aa28.88■■■□□ 2.21
SRM-202ENST00000459997 USHBP1Q8N6Y0 703 aa28.86■■■□□ 2.21
SRM-202ENST00000459997 BTAF1O14981 1849 aa28.85■■■□□ 2.21
SRM-202ENST00000459997 TXNRD1Q16881 649 aa28.85■■■□□ 2.21
SRM-202ENST00000459997 ANO8Q9HCE9 1232 aaPredicted RBP28.85■■■□□ 2.21
SRM-202ENST00000459997 EMILIN1Q9Y6C2 1016 aa28.85■■■□□ 2.21
SRM-202ENST00000459997 SHANK3Q9BYB0 1731 aa28.85■■■□□ 2.21
SRM-202ENST00000459997 ANKRD26Q9UPS8 1709 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms