RNA–Protein interactions for RNA: ENST00000458090.1

AC009963.3-201, humanhuman

BASIC

Gene AC009963.3, Length 486 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009963.3-201ENST00000458090 NUP188Q5SRE5 1749 aa8.8□□□□□ -1
AC009963.3-201ENST00000458090 RGPD5Q99666 1765 aa8.79□□□□□ -1
AC009963.3-201ENST00000458090 PLSCR1O15162 318 aa8.79□□□□□ -1
AC009963.3-201ENST00000458090 SPON1Q9HCB6 807 aa8.79□□□□□ -1
AC009963.3-201ENST00000458090 SLIT3O75094 1523 aa8.79□□□□□ -1
AC009963.3-201ENST00000458090 WDR17Q8IZU2 1322 aa8.79□□□□□ -1
AC009963.3-201ENST00000458090 KAT6BQ8WYB5 2073 aa8.78□□□□□ -1
AC009963.3-201ENST00000458090 EXOC5O00471 708 aa8.78□□□□□ -1
AC009963.3-201ENST00000458090 PIK3C2AO00443 1686 aa8.78□□□□□ -1
AC009963.3-201ENST00000458090 TTC21BQ7Z4L5 1316 aa8.78□□□□□ -1
AC009963.3-201ENST00000458090 KTN1Q86UP2 1357 aaKnown RBP8.77□□□□□ -1.01
AC009963.3-201ENST00000458090 COL18A1P39060 1754 aa8.77□□□□□ -1.01
AC009963.3-201ENST00000458090 ABCC6O95255 1503 aa8.77□□□□□ -1.01
AC009963.3-201ENST00000458090 NEUROD1Q13562 356 aa8.77□□□□□ -1.01
AC009963.3-201ENST00000458090 HDGFL2Q7Z4V5 671 aaPredicted RBP8.77□□□□□ -1.01
AC009963.3-201ENST00000458090 CARD10Q9BWT7 1032 aa8.77□□□□□ -1.01
AC009963.3-201ENST00000458090 BCL11BQ9C0K0 894 aaPredicted RBP8.77□□□□□ -1.01
AC009963.3-201ENST00000458090 LRRC37A3O60309 1634 aa8.76□□□□□ -1.01
AC009963.3-201ENST00000458090 CCDC7Q96M83 1385 aa8.76□□□□□ -1.01
AC009963.3-201ENST00000458090 KCNQ2O43526 872 aa8.76□□□□□ -1.01
AC009963.3-201ENST00000458090 ARHGEF25Q86VW2 580 aa8.76□□□□□ -1.01
AC009963.3-201ENST00000458090 CPSF1Q10570 1443 aaKnown RBP8.76□□□□□ -1.01
AC009963.3-201ENST00000458090 MON2Q7Z3U7 1717 aa8.76□□□□□ -1.01
AC009963.3-201ENST00000458090 PEAK1Q9H792 1746 aa8.75□□□□□ -1.01
AC009963.3-201ENST00000458090 BCL9O00512 1426 aa8.75□□□□□ -1.01
AC009963.3-201ENST00000458090 TERF2IPQ9NYB0 399 aa8.75□□□□□ -1.01
AC009963.3-201ENST00000458090 LTN1O94822 1766 aa8.75□□□□□ -1.01
AC009963.3-201ENST00000458090 SBNO2Q9Y2G9 1366 aa8.74□□□□□ -1.01
AC009963.3-201ENST00000458090 SOX12O15370 315 aa8.74□□□□□ -1.01
AC009963.3-201ENST00000458090 HMGB2P26583 209 aaKnown RBP8.74□□□□□ -1.01
AC009963.3-201ENST00000458090 TMC1Q8TDI8 760 aa8.74□□□□□ -1.01
AC009963.3-201ENST00000458090 PUS7Q96PZ0 661 aaKnown RBP8.74□□□□□ -1.01
AC009963.3-201ENST00000458090 SIN3AQ96ST3 1273 aa8.74□□□□□ -1.01
AC009963.3-201ENST00000458090 CARD11Q9BXL7 1154 aa8.74□□□□□ -1.01
AC009963.3-201ENST00000458090 STK32BQ9NY57 414 aa8.74□□□□□ -1.01
AC009963.3-201ENST00000458090 NINLQ9Y2I6 1382 aa8.73□□□□□ -1.01
AC009963.3-201ENST00000458090 AXIN2Q9Y2T1 843 aa8.73□□□□□ -1.01
AC009963.3-201ENST00000458090 TONSLQ96HA7 1378 aa8.73□□□□□ -1.01
AC009963.3-201ENST00000458090 USP54Q70EL1 1684 aa8.72□□□□□ -1.01
AC009963.3-201ENST00000458090 FAM208AQ9UK61 1670 aaKnown RBP8.72□□□□□ -1.01
AC009963.3-201ENST00000458090 YY1P25490 414 aa8.72□□□□□ -1.01
AC009963.3-201ENST00000458090 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.72□□□□□ -1.01
AC009963.3-201ENST00000458090 NLRP2Q9NX02 1062 aa8.72□□□□□ -1.01
AC009963.3-201ENST00000458090 USP31Q70CQ4 1352 aa8.72□□□□□ -1.01
AC009963.3-201ENST00000458090 IL2RBP14784 551 aa8.71□□□□□ -1.02
AC009963.3-201ENST00000458090 MARCH10Q8NA82 808 aaPredicted RBP8.71□□□□□ -1.02
AC009963.3-201ENST00000458090 NFAT5O94916 1531 aa8.7□□□□□ -1.02
AC009963.3-201ENST00000458090 NHSQ6T4R5 1651 aa8.7□□□□□ -1.02
AC009963.3-201ENST00000458090 TXNRD1Q16881 649 aa8.7□□□□□ -1.02
AC009963.3-201ENST00000458090 ERBB3P21860 1342 aa8.7□□□□□ -1.02
AC009963.3-201ENST00000458090 TNS2Q63HR2 1409 aa8.7□□□□□ -1.02
AC009963.3-201ENST00000458090 EDC4Q6P2E9 1401 aaKnown RBP8.7□□□□□ -1.02
AC009963.3-201ENST00000458090 CASZ1Q86V15 1759 aa8.69□□□□□ -1.02
AC009963.3-201ENST00000458090 SLC15A2Q16348 729 aa8.69□□□□□ -1.02
AC009963.3-201ENST00000458090 CHD4Q14839 1912 aa8.69□□□□□ -1.02
AC009963.3-201ENST00000458090 SRCAPQ6ZRS2 3230 aa8.69□□□□□ -1.02
AC009963.3-201ENST00000458090 ANKRD24Q8TF21 1146 aa8.68□□□□□ -1.02
AC009963.3-201ENST00000458090 COG3Q96JB2 828 aa8.68□□□□□ -1.02
AC009963.3-201ENST00000458090 MTFR1LQ9H019 292 aa8.68□□□□□ -1.02
AC009963.3-201ENST00000458090 BTAF1O14981 1849 aa8.68□□□□□ -1.02
AC009963.3-201ENST00000458090 AMPHP49418 695 aa8.67□□□□□ -1.02
AC009963.3-201ENST00000458090 CDCA8Q53HL2 280 aa8.67□□□□□ -1.02
AC009963.3-201ENST00000458090 SLC27A3Q5K4L6 730 aa8.67□□□□□ -1.02
AC009963.3-201ENST00000458090 NME9Q86XW9 330 aa8.67□□□□□ -1.02
AC009963.3-201ENST00000458090 IP6K1Q92551 441 aa8.67□□□□□ -1.02
AC009963.3-201ENST00000458090 SLC12A5Q9H2X9 1139 aa8.67□□□□□ -1.02
AC009963.3-201ENST00000458090 ZBTB7AO95365 584 aa8.66□□□□□ -1.02
AC009963.3-201ENST00000458090 PROM2Q8N271 834 aa8.66□□□□□ -1.02
AC009963.3-201ENST00000458090 SLC16A10Q8TF71 515 aa8.66□□□□□ -1.02
AC009963.3-201ENST00000458090 QSER1Q2KHR3 1735 aa8.66□□□□□ -1.02
AC009963.3-201ENST00000458090 SMG6Q86US8 1419 aaKnown RBP8.65□□□□□ -1.02
AC009963.3-201ENST00000458090 A0A1W2PP64 1363 aa8.65□□□□□ -1.02
AC009963.3-201ENST00000458090 POLD1P28340 1107 aa8.65□□□□□ -1.02
AC009963.3-201ENST00000458090 TMF1P82094 1093 aa8.65□□□□□ -1.02
AC009963.3-201ENST00000458090 ACSBG1Q96GR2 724 aa8.65□□□□□ -1.02
AC009963.3-201ENST00000458090 ANO8Q9HCE9 1232 aaPredicted RBP8.65□□□□□ -1.02
AC009963.3-201ENST00000458090 ATF5Q9Y2D1 282 aaPredicted RBP8.65□□□□□ -1.02
AC009963.3-201ENST00000458090 CD163L1Q9NR16 1453 aa8.64□□□□□ -1.03
AC009963.3-201ENST00000458090 CGNL1Q0VF96 1302 aa8.64□□□□□ -1.03
AC009963.3-201ENST00000458090 DDX54Q8TDD1 881 aaKnown RBP8.64□□□□□ -1.03
AC009963.3-201ENST00000458090 MYOM1P52179 1685 aa8.64□□□□□ -1.03
AC009963.3-201ENST00000458090 ST20-MTHFSA0A0A6YYL1 179 aa8.63□□□□□ -1.03
AC009963.3-201ENST00000458090 PTF1AQ7RTS3 328 aa8.63□□□□□ -1.03
AC009963.3-201ENST00000458090 ZCRB1Q8TBF4 217 aaKnown RBP8.63□□□□□ -1.03
AC009963.3-201ENST00000458090 SYTL4Q96C24 671 aaPredicted RBP8.63□□□□□ -1.03
AC009963.3-201ENST00000458090 LTV1Q96GA3 475 aaPredicted RBP8.63□□□□□ -1.03
AC009963.3-201ENST00000458090 ARXQ96QS3 562 aa8.63□□□□□ -1.03
AC009963.3-201ENST00000458090 SYT17Q9BSW7 474 aa8.63□□□□□ -1.03
AC009963.3-201ENST00000458090 RTL1A6NKG5 1358 aa8.62□□□□□ -1.03
AC009963.3-201ENST00000458090 PTGER2P43116 358 aa8.62□□□□□ -1.03
AC009963.3-201ENST00000458090 RAPGEF4Q8WZA2 1011 aa8.62□□□□□ -1.03
AC009963.3-201ENST00000458090 FHDC1Q9C0D6 1143 aaPredicted RBP8.62□□□□□ -1.03
AC009963.3-201ENST00000458090 RGPD2P0DJD1 1756 aa8.62□□□□□ -1.03
AC009963.3-201ENST00000458090 ANKRD36BQ8N2N9 1353 aa8.61□□□□□ -1.03
AC009963.3-201ENST00000458090 KIF20BQ96Q89 1820 aa8.61□□□□□ -1.03
AC009963.3-201ENST00000458090 LY75O60449 1722 aa8.61□□□□□ -1.03
AC009963.3-201ENST00000458090 DOT1LQ8TEK3 1739 aa8.61□□□□□ -1.03
AC009963.3-201ENST00000458090 HOXC9P31274 260 aa8.61□□□□□ -1.03
AC009963.3-201ENST00000458090 TFCP2L1Q9NZI6 479 aa8.61□□□□□ -1.03
AC009963.3-201ENST00000458090 KIF24Q5T7B8 1368 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms