RNA–Protein interactions for RNA: ENST00000457435.1

LINC01546-201, Transcript of long intergenic non-protein coding RNA 1546, humanhuman

TSL 2 BASIC

Gene LINC01546, Length 674 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546-201ENST00000457435 CBLBQ13191 982 aa8.39□□□□□ -1.07
LINC01546-201ENST00000457435 ERFEQ4G0M1 354 aa8.39□□□□□ -1.07
LINC01546-201ENST00000457435 PPP1R26Q5T8A7 1209 aaPredicted RBP8.39□□□□□ -1.07
LINC01546-201ENST00000457435 GPKOWQ92917 476 aaPredicted RBP eCLIP8.39□□□□□ -1.07
LINC01546-201ENST00000457435 FBXO31Q5XUX0 539 aaPredicted RBP8.38□□□□□ -1.07
LINC01546-201ENST00000457435 ZBTB33Q86T24 672 aa8.38□□□□□ -1.07
LINC01546-201ENST00000457435 ARHGAP9Q9BRR9 750 aa8.38□□□□□ -1.07
LINC01546-201ENST00000457435 PTSQ03393 145 aa8.36□□□□□ -1.07
LINC01546-201ENST00000457435 PDXDC2PQ6P474 469 aa8.36□□□□□ -1.07
LINC01546-201ENST00000457435 LRRN4Q8WUT4 740 aa8.36□□□□□ -1.07
LINC01546-201ENST00000457435 SLC10A4Q96EP9 437 aa8.36□□□□□ -1.07
LINC01546-201ENST00000457435 CNTNAP3BQ96NU0 1288 aa8.36□□□□□ -1.07
LINC01546-201ENST00000457435 KCTD15Q96SI1 283 aaPredicted RBP8.36□□□□□ -1.07
LINC01546-201ENST00000457435 CNTNAP3Q9BZ76 1288 aa8.36□□□□□ -1.07
LINC01546-201ENST00000457435 GPR161Q8N6U8 529 aaKnown RBP8.35□□□□□ -1.07
LINC01546-201ENST00000457435 FKBPLQ9UIM3 349 aa8.34□□□□□ -1.07
LINC01546-201ENST00000457435 SPINT1O43278 529 aa8.33□□□□□ -1.08
LINC01546-201ENST00000457435 DHX9Q08211 1270 aaKnown RBP8.33□□□□□ -1.08
LINC01546-201ENST00000457435 NR6A1Q15406 480 aa8.33□□□□□ -1.08
LINC01546-201ENST00000457435 AGBL1Q96MI9 1066 aa8.33□□□□□ -1.08
LINC01546-201ENST00000457435 CDV3Q9UKY7 258 aaKnown RBP8.33□□□□□ -1.08
LINC01546-201ENST00000457435 RELBQ01201 579 aa8.32□□□□□ -1.08
LINC01546-201ENST00000457435 PTK2Q05397 1052 aa8.32□□□□□ -1.08
LINC01546-201ENST00000457435 Q6ZVU0 165 aa8.32□□□□□ -1.08
LINC01546-201ENST00000457435 CCDC155Q8N6L0 562 aa8.32□□□□□ -1.08
LINC01546-201ENST00000457435 RAB15P59190 212 aa8.31□□□□□ -1.08
LINC01546-201ENST00000457435 KRT76Q01546 638 aa8.31□□□□□ -1.08
LINC01546-201ENST00000457435 COL25A1Q9BXS0 654 aaPredicted RBP8.31□□□□□ -1.08
LINC01546-201ENST00000457435 POLMQ9NP87 494 aaPredicted RBP8.31□□□□□ -1.08
LINC01546-201ENST00000457435 CDC14CA4D256 554 aa8.3□□□□□ -1.08
LINC01546-201ENST00000457435 AP1G2O75843 785 aa8.3□□□□□ -1.08
LINC01546-201ENST00000457435 SKIV2LQ15477 1246 aaKnown RBP8.3□□□□□ -1.08
LINC01546-201ENST00000457435 INTS6LQ5JSJ4 861 aaKnown RBP8.3□□□□□ -1.08
LINC01546-201ENST00000457435 VWA5B2Q8N398 1253 aa8.3□□□□□ -1.08
LINC01546-201ENST00000457435 PROCA1Q8NCQ7 364 aaPredicted RBP8.3□□□□□ -1.08
LINC01546-201ENST00000457435 INSM2Q96T92 566 aaPredicted RBP8.3□□□□□ -1.08
LINC01546-201ENST00000457435 CTSOP43234 321 aaPredicted RBP8.29□□□□□ -1.08
LINC01546-201ENST00000457435 KCNMA1Q12791 1236 aa8.29□□□□□ -1.08
LINC01546-201ENST00000457435 KCTD17Q8N5Z5 321 aa8.29□□□□□ -1.08
LINC01546-201ENST00000457435 ZNF395Q9H8N7 513 aaPredicted RBP8.29□□□□□ -1.08
LINC01546-201ENST00000457435 ADAMTS8Q9UP79 889 aa8.29□□□□□ -1.08
LINC01546-201ENST00000457435 ADAM32Q8TC27 787 aa8.28□□□□□ -1.08
LINC01546-201ENST00000457435 BCANQ96GW7 911 aa8.28□□□□□ -1.08
LINC01546-201ENST00000457435 ZC3H4Q9UPT8 1303 aaKnown RBP8.28□□□□□ -1.08
LINC01546-201ENST00000457435 SV2AQ7L0J3 742 aa8.27□□□□□ -1.09
LINC01546-201ENST00000457435 TMEM151AQ8N4L1 468 aa8.27□□□□□ -1.09
LINC01546-201ENST00000457435 SVOPQ8N4V2 548 aa8.27□□□□□ -1.09
LINC01546-201ENST00000457435 PNMA1Q8ND90 353 aa8.27□□□□□ -1.09
LINC01546-201ENST00000457435 NANOS1Q8WY41 292 aaKnown RBP8.27□□□□□ -1.09
LINC01546-201ENST00000457435 TMPRSS4Q9NRS4 437 aa8.27□□□□□ -1.09
LINC01546-201ENST00000457435 SLC35F4A4IF30 521 aa8.26□□□□□ -1.09
LINC01546-201ENST00000457435 GDF11O95390 407 aa8.26□□□□□ -1.09
LINC01546-201ENST00000457435 ITGA6P23229 1130 aa8.26□□□□□ -1.09
LINC01546-201ENST00000457435 DZIP3Q86Y13 1208 aaKnown RBP8.26□□□□□ -1.09
LINC01546-201ENST00000457435 OCSTAMPQ9BR26 566 aa8.26□□□□□ -1.09
LINC01546-201ENST00000457435 RASSF7Q02833 373 aa8.25□□□□□ -1.09
LINC01546-201ENST00000457435 NBPF20Q3BBV1 942 aa8.25□□□□□ -1.09
LINC01546-201ENST00000457435 SH3D19Q5HYK7 790 aa8.25□□□□□ -1.09
LINC01546-201ENST00000457435 RNFT1Q5M7Z0 435 aa8.25□□□□□ -1.09
LINC01546-201ENST00000457435 GPBP1L1Q9HC44 474 aaPredicted RBP8.25□□□□□ -1.09
LINC01546-201ENST00000457435 GPSM3Q9Y4H4 160 aa8.25□□□□□ -1.09
LINC01546-201ENST00000457435 EPS8L1Q8TE68 723 aa8.24□□□□□ -1.09
LINC01546-201ENST00000457435 DDRGK1Q96HY6 314 aa8.24□□□□□ -1.09
LINC01546-201ENST00000457435 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.24□□□□□ -1.09
LINC01546-201ENST00000457435 FAM117AQ9C073 453 aa8.24□□□□□ -1.09
LINC01546-201ENST00000457435 KDM4CQ9H3R0 1056 aa8.24□□□□□ -1.09
LINC01546-201ENST00000457435 RNF225M0QZC1 329 aaPredicted RBP8.23□□□□□ -1.09
LINC01546-201ENST00000457435 ZNF385CQ66K41 422 aaPredicted RBP8.23□□□□□ -1.09
LINC01546-201ENST00000457435 PPP2R2DQ66LE6 453 aa8.23□□□□□ -1.09
LINC01546-201ENST00000457435 ZNF784Q8NCA9 323 aaPredicted RBP8.23□□□□□ -1.09
LINC01546-201ENST00000457435 GSK3AP49840 483 aa8.22□□□□□ -1.09
LINC01546-201ENST00000457435 RNF217Q8TC41 542 aa8.22□□□□□ -1.09
LINC01546-201ENST00000457435 WHAMMQ8TF30 809 aa8.22□□□□□ -1.09
LINC01546-201ENST00000457435 ERVH48-1M5A8F1 160 aa8.21□□□□□ -1.1
LINC01546-201ENST00000457435 ADH1AP07327 375 aa8.21□□□□□ -1.1
LINC01546-201ENST00000457435 ADD1P35611 737 aaKnown RBP8.21□□□□□ -1.1
LINC01546-201ENST00000457435 PTGIRP43119 386 aa8.21□□□□□ -1.1
LINC01546-201ENST00000457435 MARSP56192 900 aaKnown RBP8.21□□□□□ -1.1
LINC01546-201ENST00000457435 SUZ12Q15022 739 aaKnown RBP8.21□□□□□ -1.1
LINC01546-201ENST00000457435 USP17L8P0C7I0 530 aa8.19□□□□□ -1.1
LINC01546-201ENST00000457435 IRS1P35568 1242 aa8.19□□□□□ -1.1
LINC01546-201ENST00000457435 LYSMD3Q7Z3D4 306 aa8.19□□□□□ -1.1
LINC01546-201ENST00000457435 PRICKLE2Q7Z3G6 844 aa8.19□□□□□ -1.1
LINC01546-201ENST00000457435 HMX1Q9NP08 348 aaPredicted RBP8.19□□□□□ -1.1
LINC01546-201ENST00000457435 CYLDQ9NQC7 956 aa8.19□□□□□ -1.1
LINC01546-201ENST00000457435 LILRA1O75019 489 aa8.18□□□□□ -1.1
LINC01546-201ENST00000457435 SLURP2P0DP57 97 aa8.18□□□□□ -1.1
LINC01546-201ENST00000457435 SENP3-EIF4A1A0A087X0R7 540 aa8.17□□□□□ -1.1
LINC01546-201ENST00000457435 ADAMTS2O95450 1211 aa8.17□□□□□ -1.1
LINC01546-201ENST00000457435 RHOQP17081 205 aa8.17□□□□□ -1.1
LINC01546-201ENST00000457435 FOXD4L5Q5VV16 416 aaPredicted RBP8.17□□□□□ -1.1
LINC01546-201ENST00000457435 MAP3K10Q02779 954 aa8.16□□□□□ -1.1
LINC01546-201ENST00000457435 TRIM52Q96A61 297 aa8.16□□□□□ -1.1
LINC01546-201ENST00000457435 LOC100996750A0A140TA64 210 aa8.15□□□□□ -1.1
LINC01546-201ENST00000457435 ESPNB1AK53 854 aa8.15□□□□□ -1.1
LINC01546-201ENST00000457435 ARHGEF15O94989 841 aa8.15□□□□□ -1.1
LINC01546-201ENST00000457435 RFC5P40937 340 aa8.15□□□□□ -1.1
LINC01546-201ENST00000457435 KDF1Q8NAX2 398 aaPredicted RBP8.15□□□□□ -1.1
LINC01546-201ENST00000457435 KRTAP4-6Q9BYQ5 205 aa8.15□□□□□ -1.1
LINC01546-201ENST00000457435 CUEDC1Q9NWM3 386 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms