RNA–Protein interactions for RNA: ENST00000456957.2

PKNOX1-204, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 3

Gene PKNOX1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-204ENST00000456957 ADAMTS2O95450 1211 aa21.88■■□□□ 1.09
PKNOX1-204ENST00000456957 PRDM11Q9NQV5 511 aa21.88■■□□□ 1.09
PKNOX1-204ENST00000456957 NRAPQ86VF7 1730 aa21.88■■□□□ 1.09
PKNOX1-204ENST00000456957 NWD2Q9ULI1 1742 aa21.88■■□□□ 1.09
PKNOX1-204ENST00000456957 FLT4P35916 1363 aa21.87■■□□□ 1.09
PKNOX1-204ENST00000456957 KIF24Q5T7B8 1368 aa21.87■■□□□ 1.09
PKNOX1-204ENST00000456957 MTHFSP49914 203 aa21.87■■□□□ 1.09
PKNOX1-204ENST00000456957 CHRNA2Q15822 529 aa21.87■■□□□ 1.09
PKNOX1-204ENST00000456957 COL3A1P02461 1466 aaPredicted RBP21.86■■□□□ 1.09
PKNOX1-204ENST00000456957 PPM1GO15355 546 aaPredicted RBP21.86■■□□□ 1.09
PKNOX1-204ENST00000456957 AMPHP49418 695 aa21.86■■□□□ 1.09
PKNOX1-204ENST00000456957 CAMTA1Q9Y6Y1 1673 aa21.85■■□□□ 1.09
PKNOX1-204ENST00000456957 RGPD2P0DJD1 1756 aa21.84■■□□□ 1.09
PKNOX1-204ENST00000456957 BLMP54132 1417 aaPredicted RBP21.84■■□□□ 1.09
PKNOX1-204ENST00000456957 FAM83GA6ND36 823 aa21.84■■□□□ 1.09
PKNOX1-204ENST00000456957 HOXC9P31274 260 aa21.84■■□□□ 1.09
PKNOX1-204ENST00000456957 IP6K1Q92551 441 aa21.84■■□□□ 1.09
PKNOX1-204ENST00000456957 FAM208AQ9UK61 1670 aaKnown RBP21.83■■□□□ 1.09
PKNOX1-204ENST00000456957 MIER1Q8N108 512 aa21.83■■□□□ 1.09
PKNOX1-204ENST00000456957 AXIN2Q9Y2T1 843 aa21.82■■□□□ 1.08
PKNOX1-204ENST00000456957 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.82■■□□□ 1.08
PKNOX1-204ENST00000456957 INSRP06213 1382 aa21.82■■□□□ 1.08
PKNOX1-204ENST00000456957 SLIT2O94813 1529 aa21.81■■□□□ 1.08
PKNOX1-204ENST00000456957 HSP90AB2PQ58FF8 381 aa21.81■■□□□ 1.08
PKNOX1-204ENST00000456957 RGPD1P0DJD0 1748 aa21.8■■□□□ 1.08
PKNOX1-204ENST00000456957 COL5A2P05997 1499 aaPredicted RBP21.8■■□□□ 1.08
PKNOX1-204ENST00000456957 MEX3CQ5U5Q3 659 aaKnown RBP21.79■■□□□ 1.08
PKNOX1-204ENST00000456957 C8orf37Q96NL8 207 aa21.79■■□□□ 1.08
PKNOX1-204ENST00000456957 CCDC184Q52MB2 194 aa21.78■■□□□ 1.08
PKNOX1-204ENST00000456957 CFAP53Q96M91 514 aa21.78■■□□□ 1.08
PKNOX1-204ENST00000456957 POTEAQ6S8J7 498 aa21.77■■□□□ 1.08
PKNOX1-204ENST00000456957 BTG4Q9NY30 223 aa21.77■■□□□ 1.08
PKNOX1-204ENST00000456957 ERBB3P21860 1342 aa21.76■■□□□ 1.07
PKNOX1-204ENST00000456957 EIF4A2Q14240 407 aaKnown RBP21.75■■□□□ 1.07
PKNOX1-204ENST00000456957 ANKRD24Q8TF21 1146 aa21.75■■□□□ 1.07
PKNOX1-204ENST00000456957 LTV1Q96GA3 475 aaPredicted RBP21.75■■□□□ 1.07
PKNOX1-204ENST00000456957 NGLY1Q96IV0 654 aa21.75■■□□□ 1.07
PKNOX1-204ENST00000456957 BCL9LQ86UU0 1499 aa21.74■■□□□ 1.07
PKNOX1-204ENST00000456957 CCER2I3L3R5 266 aa21.73■■□□□ 1.07
PKNOX1-204ENST00000456957 DIAPH1O60610 1272 aaKnown RBP21.73■■□□□ 1.07
PKNOX1-204ENST00000456957 FNBP4Q8N3X1 1017 aaPredicted RBP21.73■■□□□ 1.07
PKNOX1-204ENST00000456957 MRS2Q9HD23 443 aa21.73■■□□□ 1.07
PKNOX1-204ENST00000456957 WNK3Q9BYP7 1800 aa21.72■■□□□ 1.07
PKNOX1-204ENST00000456957 IL13P35225 146 aa21.72■■□□□ 1.07
PKNOX1-204ENST00000456957 STRN4Q9NRL3 753 aa21.71■■□□□ 1.07
PKNOX1-204ENST00000456957 AFF2P51816 1311 aa21.71■■□□□ 1.07
PKNOX1-204ENST00000456957 WDR17Q8IZU2 1322 aa21.71■■□□□ 1.07
PKNOX1-204ENST00000456957 CSB-PGBD3P0DP91 1061 aa21.69■■□□□ 1.06
PKNOX1-204ENST00000456957 EVA1CP58658 441 aa21.69■■□□□ 1.06
PKNOX1-204ENST00000456957 CRB1P82279 1406 aa21.69■■□□□ 1.06
PKNOX1-204ENST00000456957 LARP1Q6PKG0 1096 aaKnown RBP21.68■■□□□ 1.06
PKNOX1-204ENST00000456957 UNC5CLQ8IV45 518 aa21.68■■□□□ 1.06
PKNOX1-204ENST00000456957 USP21Q9UK80 565 aa21.68■■□□□ 1.06
PKNOX1-204ENST00000456957 NCAPD2Q15021 1401 aa21.67■■□□□ 1.06
PKNOX1-204ENST00000456957 IGSF1Q8N6C5 1336 aa21.66■■□□□ 1.06
PKNOX1-204ENST00000456957 NBPF6Q5VWK0 638 aa21.66■■□□□ 1.06
PKNOX1-204ENST00000456957 NBPF4Q96M43 638 aa21.66■■□□□ 1.06
PKNOX1-204ENST00000456957 EYA1Q99502 592 aa21.66■■□□□ 1.06
PKNOX1-204ENST00000456957 U2SURPO15042 1029 aaKnown RBP21.65■■□□□ 1.06
PKNOX1-204ENST00000456957 TOM1L2Q6ZVM7 507 aa21.65■■□□□ 1.06
PKNOX1-204ENST00000456957 NLRP2Q9NX02 1062 aa21.65■■□□□ 1.06
PKNOX1-204ENST00000456957 NUDCQ9Y266 331 aa21.65■■□□□ 1.06
PKNOX1-204ENST00000456957 PARP4Q9UKK3 1724 aaKnown RBP21.64■■□□□ 1.06
PKNOX1-204ENST00000456957 USHBP1Q8N6Y0 703 aa21.64■■□□□ 1.05
PKNOX1-204ENST00000456957 ATRNO75882 1429 aa21.63■■□□□ 1.05
PKNOX1-204ENST00000456957 GLI3P10071 1580 aa21.63■■□□□ 1.05
PKNOX1-204ENST00000456957 ZNF772Q68DY9 489 aaPredicted RBP21.63■■□□□ 1.05
PKNOX1-204ENST00000456957 PNISRQ8TF01 805 aaKnown RBP21.63■■□□□ 1.05
PKNOX1-204ENST00000456957 VPS72Q15906 364 aa21.62■■□□□ 1.05
PKNOX1-204ENST00000456957 CARD10Q9BWT7 1032 aa21.62■■□□□ 1.05
PKNOX1-204ENST00000456957 KDRP35968 1356 aa21.61■■□□□ 1.05
PKNOX1-204ENST00000456957 SPATA31A5Q5VU36 1347 aa21.61■■□□□ 1.05
PKNOX1-204ENST00000456957 SPATA31A7Q8IWB4 1347 aa21.61■■□□□ 1.05
PKNOX1-204ENST00000456957 U2AF1L5P0DN76 240 aaPredicted RBP21.61■■□□□ 1.05
PKNOX1-204ENST00000456957 U2AF1Q01081 240 aaKnown RBP eCLIP21.61■■□□□ 1.05
PKNOX1-204ENST00000456957 WDR43Q15061 677 aaKnown RBP eCLIP21.61■■□□□ 1.05
PKNOX1-204ENST00000456957 AEBP1Q8IUX7 1158 aa21.61■■□□□ 1.05
PKNOX1-204ENST00000456957 SPATA31A1Q5TZJ5 1347 aa21.6■■□□□ 1.05
PKNOX1-204ENST00000456957 HMOX1P09601 288 aa21.6■■□□□ 1.05
PKNOX1-204ENST00000456957 SULT6B1Q6IMI4 303 aa21.59■■□□□ 1.05
PKNOX1-204ENST00000456957 USP35Q9P2H5 1018 aa21.59■■□□□ 1.05
PKNOX1-204ENST00000456957 PKD1L3Q7Z443 1732 aa21.58■■□□□ 1.05
PKNOX1-204ENST00000456957 TRPC5Q9UL62 973 aaPredicted RBP21.58■■□□□ 1.05
PKNOX1-204ENST00000456957 ADAMTS8Q9UP79 889 aa21.58■■□□□ 1.05
PKNOX1-204ENST00000456957 CCDC9Q9Y3X0 531 aaKnown RBP21.58■■□□□ 1.05
PKNOX1-204ENST00000456957 MEGF6O75095 1541 aa21.58■■□□□ 1.04
PKNOX1-204ENST00000456957 SHANK3Q9BYB0 1731 aa21.58■■□□□ 1.04
PKNOX1-204ENST00000456957 RSPH6AQ9H0K4 717 aa21.57■■□□□ 1.04
PKNOX1-204ENST00000456957 THSD7AQ9UPZ6 1657 aa21.56■■□□□ 1.04
PKNOX1-204ENST00000456957 DISP2A7MBM2 1401 aa21.56■■□□□ 1.04
PKNOX1-204ENST00000456957 LRRC37A3O60309 1634 aa21.56■■□□□ 1.04
PKNOX1-204ENST00000456957 FAM9BQ8IZU0 186 aa21.56■■□□□ 1.04
PKNOX1-204ENST00000456957 TCP11L2Q8N4U5 519 aa21.55■■□□□ 1.04
PKNOX1-204ENST00000456957 QTRT2Q9H974 415 aaKnown RBP21.55■■□□□ 1.04
PKNOX1-204ENST00000456957 FCHSD2O94868 740 aa21.54■■□□□ 1.04
PKNOX1-204ENST00000456957 GJD4Q96KN9 370 aaPredicted RBP21.54■■□□□ 1.04
PKNOX1-204ENST00000456957 PRKAR2BP31323 418 aa21.53■■□□□ 1.04
PKNOX1-204ENST00000456957 THRAP3Q9Y2W1 955 aaKnown RBP21.53■■□□□ 1.04
PKNOX1-204ENST00000456957 OVOS2A0A0G2JMS6 1433 aa21.53■■□□□ 1.04
PKNOX1-204ENST00000456957 DLG5Q8TDM6 1919 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms