RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 LTN1O94822 1766 aa19.01■□□□□ 0.63
LINC00887-204ENST00000456816 LTV1Q96GA3 475 aaPredicted RBP19■□□□□ 0.63
LINC00887-204ENST00000456816 KIF24Q5T7B8 1368 aa19■□□□□ 0.63
LINC00887-204ENST00000456816 SMG6Q86US8 1419 aaKnown RBP19■□□□□ 0.63
LINC00887-204ENST00000456816 CDK12Q9NYV4 1490 aaPredicted RBP18.99■□□□□ 0.63
LINC00887-204ENST00000456816 CSB-PGBD3P0DP91 1061 aa18.99■□□□□ 0.63
LINC00887-204ENST00000456816 MAP2P11137 1827 aaKnown RBP18.98■□□□□ 0.63
LINC00887-204ENST00000456816 EVA1CP58658 441 aa18.98■□□□□ 0.63
LINC00887-204ENST00000456816 HSP90AB2PQ58FF8 381 aa18.98■□□□□ 0.63
LINC00887-204ENST00000456816 MIER1Q8N108 512 aa18.98■□□□□ 0.63
LINC00887-204ENST00000456816 BTG4Q9NY30 223 aa18.98■□□□□ 0.63
LINC00887-204ENST00000456816 COL14A1Q05707 1796 aaKnown RBP18.98■□□□□ 0.63
LINC00887-204ENST00000456816 BLMP54132 1417 aaPredicted RBP18.98■□□□□ 0.63
LINC00887-204ENST00000456816 ABCC6O95255 1503 aa18.97■□□□□ 0.63
LINC00887-204ENST00000456816 STRN4Q9NRL3 753 aa18.97■□□□□ 0.63
LINC00887-204ENST00000456816 PEAK1Q9H792 1746 aa18.97■□□□□ 0.63
LINC00887-204ENST00000456816 INSRP06213 1382 aa18.96■□□□□ 0.63
LINC00887-204ENST00000456816 ANKRD24Q8TF21 1146 aa18.96■□□□□ 0.63
LINC00887-204ENST00000456816 AXIN2Q9Y2T1 843 aa18.96■□□□□ 0.63
LINC00887-204ENST00000456816 DIAPH1O60610 1272 aaKnown RBP18.95■□□□□ 0.62
LINC00887-204ENST00000456816 MRS2Q9HD23 443 aa18.95■□□□□ 0.62
LINC00887-204ENST00000456816 AFF2P51816 1311 aa18.94■□□□□ 0.62
LINC00887-204ENST00000456816 PLCH1Q4KWH8 1693 aa18.93■□□□□ 0.62
LINC00887-204ENST00000456816 CAMTA1Q9Y6Y1 1673 aa18.93■□□□□ 0.62
LINC00887-204ENST00000456816 NUDCQ9Y266 331 aa18.93■□□□□ 0.62
LINC00887-204ENST00000456816 LMO7Q8WWI1 1683 aa18.92■□□□□ 0.62
LINC00887-204ENST00000456816 U2SURPO15042 1029 aaKnown RBP18.92■□□□□ 0.62
LINC00887-204ENST00000456816 EIF4A2Q14240 407 aaKnown RBP18.92■□□□□ 0.62
LINC00887-204ENST00000456816 NLRP2Q9NX02 1062 aa18.92■□□□□ 0.62
LINC00887-204ENST00000456816 USP21Q9UK80 565 aa18.92■□□□□ 0.62
LINC00887-204ENST00000456816 CCDC9Q9Y3X0 531 aaKnown RBP18.92■□□□□ 0.62
LINC00887-204ENST00000456816 ERBB3P21860 1342 aa18.92■□□□□ 0.62
LINC00887-204ENST00000456816 COL5A2P05997 1499 aaPredicted RBP18.91■□□□□ 0.62
LINC00887-204ENST00000456816 COL18A1P39060 1754 aa18.91■□□□□ 0.62
LINC00887-204ENST00000456816 TOM1L2Q6ZVM7 507 aa18.91■□□□□ 0.62
LINC00887-204ENST00000456816 SLIT2O94813 1529 aa18.9■□□□□ 0.62
LINC00887-204ENST00000456816 WDR43Q15061 677 aaKnown RBP eCLIP18.9■□□□□ 0.62
LINC00887-204ENST00000456816 UNC5CLQ8IV45 518 aa18.9■□□□□ 0.62
LINC00887-204ENST00000456816 CCER2I3L3R5 266 aa18.89■□□□□ 0.61
LINC00887-204ENST00000456816 LARP1Q6PKG0 1096 aaKnown RBP18.89■□□□□ 0.61
LINC00887-204ENST00000456816 FNBP4Q8N3X1 1017 aaPredicted RBP18.89■□□□□ 0.61
LINC00887-204ENST00000456816 WDR17Q8IZU2 1322 aa18.89■□□□□ 0.61
LINC00887-204ENST00000456816 COL3A1P02461 1466 aaPredicted RBP18.89■□□□□ 0.61
LINC00887-204ENST00000456816 IL13P35225 146 aa18.88■□□□□ 0.61
LINC00887-204ENST00000456816 CCDC184Q52MB2 194 aa18.88■□□□□ 0.61
LINC00887-204ENST00000456816 NWD2Q9ULI1 1742 aa18.88■□□□□ 0.61
LINC00887-204ENST00000456816 RGPD5Q99666 1765 aa18.88■□□□□ 0.61
LINC00887-204ENST00000456816 U2AF1L5P0DN76 240 aaPredicted RBP18.87■□□□□ 0.61
LINC00887-204ENST00000456816 U2AF1Q01081 240 aaKnown RBP eCLIP18.87■□□□□ 0.61
LINC00887-204ENST00000456816 USP35Q9P2H5 1018 aa18.87■□□□□ 0.61
LINC00887-204ENST00000456816 USHBP1Q8N6Y0 703 aa18.86■□□□□ 0.61
LINC00887-204ENST00000456816 BCL9LQ86UU0 1499 aa18.85■□□□□ 0.61
LINC00887-204ENST00000456816 CRB1P82279 1406 aa18.85■□□□□ 0.61
LINC00887-204ENST00000456816 NBPF6Q5VWK0 638 aa18.85■□□□□ 0.61
LINC00887-204ENST00000456816 ZNF772Q68DY9 489 aaPredicted RBP18.85■□□□□ 0.61
LINC00887-204ENST00000456816 ILDR2Q71H61 639 aa18.85■□□□□ 0.61
LINC00887-204ENST00000456816 NBPF4Q96M43 638 aa18.85■□□□□ 0.61
LINC00887-204ENST00000456816 EYA1Q99502 592 aa18.85■□□□□ 0.61
LINC00887-204ENST00000456816 NRAPQ86VF7 1730 aa18.84■□□□□ 0.61
LINC00887-204ENST00000456816 TRPC5Q9UL62 973 aaPredicted RBP18.84■□□□□ 0.61
LINC00887-204ENST00000456816 FAM208AQ9UK61 1670 aaKnown RBP18.83■□□□□ 0.61
LINC00887-204ENST00000456816 HMOX1P09601 288 aa18.83■□□□□ 0.6
LINC00887-204ENST00000456816 VPS72Q15906 364 aa18.83■□□□□ 0.6
LINC00887-204ENST00000456816 CARD10Q9BWT7 1032 aa18.83■□□□□ 0.6
LINC00887-204ENST00000456816 IGSF1Q8N6C5 1336 aa18.82■□□□□ 0.6
LINC00887-204ENST00000456816 SULT6B1Q6IMI4 303 aa18.82■□□□□ 0.6
LINC00887-204ENST00000456816 QTRT2Q9H974 415 aaKnown RBP18.82■□□□□ 0.6
LINC00887-204ENST00000456816 FAM9BQ8IZU0 186 aa18.81■□□□□ 0.6
LINC00887-204ENST00000456816 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.8■□□□□ 0.6
LINC00887-204ENST00000456816 SPATA31A1Q5TZJ5 1347 aa18.8■□□□□ 0.6
LINC00887-204ENST00000456816 SPATA31A5Q5VU36 1347 aa18.8■□□□□ 0.6
LINC00887-204ENST00000456816 SPATA31A7Q8IWB4 1347 aa18.8■□□□□ 0.6
LINC00887-204ENST00000456816 AEBP1Q8IUX7 1158 aa18.8■□□□□ 0.6
LINC00887-204ENST00000456816 TCP11L2Q8N4U5 519 aa18.8■□□□□ 0.6
LINC00887-204ENST00000456816 RAPGEF4Q8WZA2 1011 aa18.8■□□□□ 0.6
LINC00887-204ENST00000456816 A0A0G2JS52 829 aa18.79■□□□□ 0.6
LINC00887-204ENST00000456816 NEFMP07197 916 aa18.79■□□□□ 0.6
LINC00887-204ENST00000456816 MYT1Q01538 1121 aa18.79■□□□□ 0.6
LINC00887-204ENST00000456816 ATRNO75882 1429 aa18.79■□□□□ 0.6
LINC00887-204ENST00000456816 SOCS7O14512 581 aa18.78■□□□□ 0.6
LINC00887-204ENST00000456816 PNISRQ8TF01 805 aaKnown RBP18.78■□□□□ 0.6
LINC00887-204ENST00000456816 PNNQ9H307 717 aaKnown RBP18.78■□□□□ 0.6
LINC00887-204ENST00000456816 TATP17735 454 aaPredicted RBP18.77■□□□□ 0.6
LINC00887-204ENST00000456816 GJD4Q96KN9 370 aaPredicted RBP18.77■□□□□ 0.6
LINC00887-204ENST00000456816 ADAMTS8Q9UP79 889 aa18.77■□□□□ 0.6
LINC00887-204ENST00000456816 THRAP3Q9Y2W1 955 aaKnown RBP18.77■□□□□ 0.6
LINC00887-204ENST00000456816 RGPD2P0DJD1 1756 aa18.77■□□□□ 0.6
LINC00887-204ENST00000456816 FCHSD2O94868 740 aa18.76■□□□□ 0.59
LINC00887-204ENST00000456816 IL2RBP14784 551 aa18.76■□□□□ 0.59
LINC00887-204ENST00000456816 PRKAR2BP31323 418 aa18.76■□□□□ 0.59
LINC00887-204ENST00000456816 FAM98CQ17RN3 349 aaKnown RBP18.76■□□□□ 0.59
LINC00887-204ENST00000456816 RGPD1P0DJD0 1748 aa18.76■□□□□ 0.59
LINC00887-204ENST00000456816 MAPK8IP3Q9UPT6 1336 aa18.75■□□□□ 0.59
LINC00887-204ENST00000456816 KDRP35968 1356 aa18.74■□□□□ 0.59
LINC00887-204ENST00000456816 CCDC146Q8IYE0 955 aa18.74■□□□□ 0.59
LINC00887-204ENST00000456816 RSPH6AQ9H0K4 717 aa18.74■□□□□ 0.59
LINC00887-204ENST00000456816 NCAPD2Q15021 1401 aa18.74■□□□□ 0.59
LINC00887-204ENST00000456816 BARGINQ6ZT62 677 aa18.73■□□□□ 0.59
LINC00887-204ENST00000456816 CDCA7Q9BWT1 371 aaPredicted RBP18.73■□□□□ 0.59
LINC00887-204ENST00000456816 RXRBP28702 533 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms