RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 GGNBP2Q9H3C7 697 aa24.99■■□□□ 1.59
PDLIM2-215ENST00000456545 THRAP3Q9Y2W1 955 aaKnown RBP24.98■■□□□ 1.59
PDLIM2-215ENST00000456545 BRWD3Q6RI45 1802 aa24.98■■□□□ 1.59
PDLIM2-215ENST00000456545 FYB1O15117 783 aa24.97■■□□□ 1.59
PDLIM2-215ENST00000456545 BARGINQ6ZT62 677 aa24.97■■□□□ 1.59
PDLIM2-215ENST00000456545 NFAT5O94916 1531 aa24.96■■□□□ 1.59
PDLIM2-215ENST00000456545 CRB1P82279 1406 aa24.96■■□□□ 1.59
PDLIM2-215ENST00000456545 OVOS2A0A0J9YW53 1432 aa24.95■■□□□ 1.59
PDLIM2-215ENST00000456545 OVOS2Q6IE36 1432 aa24.95■■□□□ 1.59
PDLIM2-215ENST00000456545 WDR17Q8IZU2 1322 aa24.95■■□□□ 1.58
PDLIM2-215ENST00000456545 CCDC125Q86Z20 511 aa24.95■■□□□ 1.58
PDLIM2-215ENST00000456545 USP54Q70EL1 1684 aa24.94■■□□□ 1.58
PDLIM2-215ENST00000456545 PDE3BQ13370 1112 aa24.94■■□□□ 1.58
PDLIM2-215ENST00000456545 SF3B2Q13435 895 aaKnown RBP24.94■■□□□ 1.58
PDLIM2-215ENST00000456545 CARD14Q9BXL6 1004 aa24.94■■□□□ 1.58
PDLIM2-215ENST00000456545 COL18A1P39060 1754 aa24.94■■□□□ 1.58
PDLIM2-215ENST00000456545 RGPD5Q99666 1765 aa24.93■■□□□ 1.58
PDLIM2-215ENST00000456545 AMPHP49418 695 aa24.93■■□□□ 1.58
PDLIM2-215ENST00000456545 NSD3Q9BZ95 1437 aa24.93■■□□□ 1.58
PDLIM2-215ENST00000456545 MYOM1P52179 1685 aa24.91■■□□□ 1.58
PDLIM2-215ENST00000456545 LTN1O94822 1766 aa24.9■■□□□ 1.58
PDLIM2-215ENST00000456545 CGNL1Q0VF96 1302 aa24.9■■□□□ 1.58
PDLIM2-215ENST00000456545 PANK3Q9H999 370 aa24.9■■□□□ 1.58
PDLIM2-215ENST00000456545 NLRP2Q9NX02 1062 aa24.9■■□□□ 1.58
PDLIM2-215ENST00000456545 C11orf95C9JLR9 678 aaPredicted RBP24.89■■□□□ 1.58
PDLIM2-215ENST00000456545 FBLN1P23142 703 aa24.89■■□□□ 1.58
PDLIM2-215ENST00000456545 FAM182BQ5T319 152 aa24.89■■□□□ 1.58
PDLIM2-215ENST00000456545 ANKRD24Q8TF21 1146 aa24.89■■□□□ 1.58
PDLIM2-215ENST00000456545 IP6K1Q92551 441 aa24.89■■□□□ 1.58
PDLIM2-215ENST00000456545 CARD10Q9BWT7 1032 aa24.89■■□□□ 1.58
PDLIM2-215ENST00000456545 LTV1Q96GA3 475 aaPredicted RBP24.88■■□□□ 1.57
PDLIM2-215ENST00000456545 ABCC6O95255 1503 aa24.87■■□□□ 1.57
PDLIM2-215ENST00000456545 THSD7AQ9UPZ6 1657 aa24.87■■□□□ 1.57
PDLIM2-215ENST00000456545 MAP3K19Q56UN5 1328 aa24.86■■□□□ 1.57
PDLIM2-215ENST00000456545 KIF20BQ96Q89 1820 aa24.86■■□□□ 1.57
PDLIM2-215ENST00000456545 CDCA7Q9BWT1 371 aaPredicted RBP24.86■■□□□ 1.57
PDLIM2-215ENST00000456545 RRS1Q15050 365 aaKnown RBP24.85■■□□□ 1.57
PDLIM2-215ENST00000456545 DDB1Q16531 1140 aa24.85■■□□□ 1.57
PDLIM2-215ENST00000456545 ERBB3P21860 1342 aa24.85■■□□□ 1.57
PDLIM2-215ENST00000456545 FAM196AQ6ZSG2 479 aa24.84■■□□□ 1.57
PDLIM2-215ENST00000456545 BLMP54132 1417 aaPredicted RBP24.84■■□□□ 1.57
PDLIM2-215ENST00000456545 CCDC7Q96M83 1385 aa24.83■■□□□ 1.57
PDLIM2-215ENST00000456545 HOXC9P31274 260 aa24.83■■□□□ 1.57
PDLIM2-215ENST00000456545 KIF7Q2M1P5 1343 aa24.82■■□□□ 1.56
PDLIM2-215ENST00000456545 KNSTRNQ9Y448 316 aa24.81■■□□□ 1.56
PDLIM2-215ENST00000456545 EXOC5O00471 708 aa24.8■■□□□ 1.56
PDLIM2-215ENST00000456545 PPM1GO15355 546 aaPredicted RBP24.79■■□□□ 1.56
PDLIM2-215ENST00000456545 TNNT2P45379 298 aaPredicted RBP24.77■■□□□ 1.56
PDLIM2-215ENST00000456545 BAG6P46379 1132 aa24.77■■□□□ 1.56
PDLIM2-215ENST00000456545 PARP4Q9UKK3 1724 aaKnown RBP24.76■■□□□ 1.55
PDLIM2-215ENST00000456545 TRIM37O94972 964 aa24.76■■□□□ 1.55
PDLIM2-215ENST00000456545 IL2RBP14784 551 aa24.76■■□□□ 1.55
PDLIM2-215ENST00000456545 RTL1A6NKG5 1358 aa24.76■■□□□ 1.55
PDLIM2-215ENST00000456545 DEFB132Q7Z7B7 95 aa24.75■■□□□ 1.55
PDLIM2-215ENST00000456545 SMG6Q86US8 1419 aaKnown RBP24.74■■□□□ 1.55
PDLIM2-215ENST00000456545 HSP90AB2PQ58FF8 381 aa24.73■■□□□ 1.55
PDLIM2-215ENST00000456545 MORC1Q86VD1 984 aa24.73■■□□□ 1.55
PDLIM2-215ENST00000456545 EMILIN1Q9Y6C2 1016 aa24.73■■□□□ 1.55
PDLIM2-215ENST00000456545 FLT4P35916 1363 aa24.72■■□□□ 1.55
PDLIM2-215ENST00000456545 KIF24Q5T7B8 1368 aa24.71■■□□□ 1.55
PDLIM2-215ENST00000456545 EP400Q96L91 3159 aa24.7■■□□□ 1.55
PDLIM2-215ENST00000456545 NSD2O96028 1365 aa24.7■■□□□ 1.55
PDLIM2-215ENST00000456545 APBA3O96018 575 aa24.7■■□□□ 1.54
PDLIM2-215ENST00000456545 WNK3Q9BYP7 1800 aa24.7■■□□□ 1.54
PDLIM2-215ENST00000456545 OVOS2A0A0G2JMS6 1433 aa24.69■■□□□ 1.54
PDLIM2-215ENST00000456545 INSRP06213 1382 aa24.69■■□□□ 1.54
PDLIM2-215ENST00000456545 MARCH10Q8NA82 808 aaPredicted RBP24.69■■□□□ 1.54
PDLIM2-215ENST00000456545 RGPD1P0DJD0 1748 aa24.69■■□□□ 1.54
PDLIM2-215ENST00000456545 DISP2A7MBM2 1401 aa24.69■■□□□ 1.54
PDLIM2-215ENST00000456545 FAM208AQ9UK61 1670 aaKnown RBP24.69■■□□□ 1.54
PDLIM2-215ENST00000456545 LRRC37A3O60309 1634 aa24.68■■□□□ 1.54
PDLIM2-215ENST00000456545 EN1Q05925 392 aaPredicted RBP24.68■■□□□ 1.54
PDLIM2-215ENST00000456545 MAP2P11137 1827 aaKnown RBP24.68■■□□□ 1.54
PDLIM2-215ENST00000456545 NBPF6Q5VWK0 638 aa24.67■■□□□ 1.54
PDLIM2-215ENST00000456545 NBPF4Q96M43 638 aa24.67■■□□□ 1.54
PDLIM2-215ENST00000456545 POLKQ9UBT6 870 aa24.67■■□□□ 1.54
PDLIM2-215ENST00000456545 WASHC2AQ641Q2 1341 aa24.66■■□□□ 1.54
PDLIM2-215ENST00000456545 ANKRD26Q9UPS8 1709 aa24.66■■□□□ 1.54
PDLIM2-215ENST00000456545 USHBP1Q8N6Y0 703 aa24.65■■□□□ 1.54
PDLIM2-215ENST00000456545 RAPGEF4Q8WZA2 1011 aa24.65■■□□□ 1.54
PDLIM2-215ENST00000456545 DDX54Q8TDD1 881 aaKnown RBP24.64■■□□□ 1.54
PDLIM2-215ENST00000456545 RGPD2P0DJD1 1756 aa24.63■■□□□ 1.53
PDLIM2-215ENST00000456545 CNGB1Q14028 1251 aaPredicted RBP24.63■■□□□ 1.53
PDLIM2-215ENST00000456545 PEAK1Q9H792 1746 aa24.63■■□□□ 1.53
PDLIM2-215ENST00000456545 TNS2Q63HR2 1409 aa24.62■■□□□ 1.53
PDLIM2-215ENST00000456545 TATP17735 454 aaPredicted RBP24.61■■□□□ 1.53
PDLIM2-215ENST00000456545 CC2D1BQ5T0F9 858 aaKnown RBP24.61■■□□□ 1.53
PDLIM2-215ENST00000456545 EZH2Q15910 746 aaKnown RBP24.6■■□□□ 1.53
PDLIM2-215ENST00000456545 AMER1Q5JTC6 1135 aaPredicted RBP24.6■■□□□ 1.53
PDLIM2-215ENST00000456545 ZCRB1Q8TBF4 217 aaKnown RBP24.6■■□□□ 1.53
PDLIM2-215ENST00000456545 BCL11BQ9C0K0 894 aaPredicted RBP24.6■■□□□ 1.53
PDLIM2-215ENST00000456545 PER1O15534 1290 aaPredicted RBP24.59■■□□□ 1.53
PDLIM2-215ENST00000456545 ACSBG1Q96GR2 724 aa24.57■■□□□ 1.52
PDLIM2-215ENST00000456545 TNS1Q9HBL0 1735 aaKnown RBP24.57■■□□□ 1.52
PDLIM2-215ENST00000456545 CAMKK2Q96RR4 588 aa24.56■■□□□ 1.52
PDLIM2-215ENST00000456545 KAT6BQ8WYB5 2073 aa24.55■■□□□ 1.52
PDLIM2-215ENST00000456545 SBF2Q86WG5 1849 aa24.54■■□□□ 1.52
PDLIM2-215ENST00000456545 BCL9O00512 1426 aa24.54■■□□□ 1.52
PDLIM2-215ENST00000456545 EIF4A2Q14240 407 aaKnown RBP24.54■■□□□ 1.52
PDLIM2-215ENST00000456545 EYA1Q99502 592 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms