RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 AXIN2Q9Y2T1 843 aa17.24■□□□□ 0.35
LMCD1-206ENST00000456506 MYOM1P52179 1685 aa17.23■□□□□ 0.35
LMCD1-206ENST00000456506 NLRP6P59044 892 aa17.23■□□□□ 0.35
LMCD1-206ENST00000456506 L3MBTL2Q969R5 705 aa17.23■□□□□ 0.35
LMCD1-206ENST00000456506 PTF1AQ7RTS3 328 aa17.22■□□□□ 0.35
LMCD1-206ENST00000456506 WDR17Q8IZU2 1322 aa17.21■□□□□ 0.35
LMCD1-206ENST00000456506 PLSCR1O15162 318 aa17.21■□□□□ 0.35
LMCD1-206ENST00000456506 PAPPAQ13219 1627 aa17.21■□□□□ 0.35
LMCD1-206ENST00000456506 BTAF1O14981 1849 aa17.2■□□□□ 0.34
LMCD1-206ENST00000456506 ARHGEF25Q86VW2 580 aa17.2■□□□□ 0.34
LMCD1-206ENST00000456506 TTC21BQ7Z4L5 1316 aa17.2■□□□□ 0.34
LMCD1-206ENST00000456506 CD163L1Q9NR16 1453 aa17.19■□□□□ 0.34
LMCD1-206ENST00000456506 C11orf95C9JLR9 678 aaPredicted RBP17.19■□□□□ 0.34
LMCD1-206ENST00000456506 EVC2Q86UK5 1308 aa17.19■□□□□ 0.34
LMCD1-206ENST00000456506 DDB1Q16531 1140 aa17.18■□□□□ 0.34
LMCD1-206ENST00000456506 NBPF14Q5TI25 921 aa17.18■□□□□ 0.34
LMCD1-206ENST00000456506 MARCH10Q8NA82 808 aaPredicted RBP17.18■□□□□ 0.34
LMCD1-206ENST00000456506 ANO8Q9HCE9 1232 aaPredicted RBP17.18■□□□□ 0.34
LMCD1-206ENST00000456506 COL24A1Q17RW2 1714 aa17.17■□□□□ 0.34
LMCD1-206ENST00000456506 PROM2Q8N271 834 aa17.17■□□□□ 0.34
LMCD1-206ENST00000456506 QSER1Q2KHR3 1735 aa17.16■□□□□ 0.34
LMCD1-206ENST00000456506 TOM1L2Q6ZVM7 507 aa17.16■□□□□ 0.34
LMCD1-206ENST00000456506 SIN3AQ96ST3 1273 aa17.16■□□□□ 0.34
LMCD1-206ENST00000456506 BCL11BQ9C0K0 894 aaPredicted RBP17.16■□□□□ 0.34
LMCD1-206ENST00000456506 FAM208AQ9UK61 1670 aaKnown RBP17.16■□□□□ 0.34
LMCD1-206ENST00000456506 TTC21AQ8NDW8 1320 aa17.16■□□□□ 0.34
LMCD1-206ENST00000456506 SHANK3Q9BYB0 1731 aa17.16■□□□□ 0.34
LMCD1-206ENST00000456506 TNS2Q63HR2 1409 aa17.15■□□□□ 0.34
LMCD1-206ENST00000456506 ZBTB7CA1YPR0 619 aa17.15■□□□□ 0.34
LMCD1-206ENST00000456506 KCNQ2O43526 872 aa17.15■□□□□ 0.34
LMCD1-206ENST00000456506 CARD10Q9BWT7 1032 aa17.15■□□□□ 0.34
LMCD1-206ENST00000456506 RGPD2P0DJD1 1756 aa17.15■□□□□ 0.34
LMCD1-206ENST00000456506 SBNO2Q9Y2G9 1366 aa17.15■□□□□ 0.34
LMCD1-206ENST00000456506 NINLQ9Y2I6 1382 aa17.15■□□□□ 0.34
LMCD1-206ENST00000456506 TUBGCP6Q96RT7 1819 aa17.14■□□□□ 0.34
LMCD1-206ENST00000456506 ZNF692Q9BU19 519 aaPredicted RBP17.14■□□□□ 0.33
LMCD1-206ENST00000456506 PDGFDQ9GZP0 370 aaPredicted RBP17.14■□□□□ 0.33
LMCD1-206ENST00000456506 SPON1Q9HCB6 807 aa17.14■□□□□ 0.33
LMCD1-206ENST00000456506 ROCK2O75116 1388 aaKnown RBP17.14■□□□□ 0.33
LMCD1-206ENST00000456506 USP31Q70CQ4 1352 aa17.14■□□□□ 0.33
LMCD1-206ENST00000456506 CHD4Q14839 1912 aa17.13■□□□□ 0.33
LMCD1-206ENST00000456506 KCNH5Q8NCM2 988 aa17.13■□□□□ 0.33
LMCD1-206ENST00000456506 CDCA7Q9BWT1 371 aaPredicted RBP17.13■□□□□ 0.33
LMCD1-206ENST00000456506 UTRNP46939 3433 aa17.12■□□□□ 0.33
LMCD1-206ENST00000456506 KTN1Q86UP2 1357 aaKnown RBP17.12■□□□□ 0.33
LMCD1-206ENST00000456506 CCDC7Q96M83 1385 aa17.11■□□□□ 0.33
LMCD1-206ENST00000456506 LY75O60449 1722 aa17.1■□□□□ 0.33
LMCD1-206ENST00000456506 KAT6BQ8WYB5 2073 aa17.09■□□□□ 0.33
LMCD1-206ENST00000456506 DOT1LQ8TEK3 1739 aa17.08■□□□□ 0.32
LMCD1-206ENST00000456506 PTGER2P43116 358 aa17.08■□□□□ 0.32
LMCD1-206ENST00000456506 ERBB3P21860 1342 aa17.07■□□□□ 0.32
LMCD1-206ENST00000456506 SOX12O15370 315 aa17.07■□□□□ 0.32
LMCD1-206ENST00000456506 TXNRD1Q16881 649 aa17.07■□□□□ 0.32
LMCD1-206ENST00000456506 YY1P25490 414 aa17.05■□□□□ 0.32
LMCD1-206ENST00000456506 EXOC5O00471 708 aa17.04■□□□□ 0.32
LMCD1-206ENST00000456506 NME9Q86XW9 330 aa17.04■□□□□ 0.32
LMCD1-206ENST00000456506 SGIP1Q9BQI5 828 aa17.04■□□□□ 0.32
LMCD1-206ENST00000456506 PPP1R1BQ9UD71 204 aaPredicted RBP17.04■□□□□ 0.32
LMCD1-206ENST00000456506 EDC4Q6P2E9 1401 aaKnown RBP17.04■□□□□ 0.32
LMCD1-206ENST00000456506 CSB-PGBD3P0DP91 1061 aa17.03■□□□□ 0.32
LMCD1-206ENST00000456506 NEUROD1Q13562 356 aa17.03■□□□□ 0.32
LMCD1-206ENST00000456506 SLC15A2Q16348 729 aa17.03■□□□□ 0.32
LMCD1-206ENST00000456506 ZBTB7AO95365 584 aa17.02■□□□□ 0.32
LMCD1-206ENST00000456506 A0A1W2PP64 1363 aa17.02■□□□□ 0.31
LMCD1-206ENST00000456506 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.01■□□□□ 0.31
LMCD1-206ENST00000456506 KIF20BQ96Q89 1820 aa16.99■□□□□ 0.31
LMCD1-206ENST00000456506 SLC12A5Q9H2X9 1139 aa16.99■□□□□ 0.31
LMCD1-206ENST00000456506 STK32BQ9NY57 414 aa16.99■□□□□ 0.31
LMCD1-206ENST00000456506 TAF1LQ8IZX4 1826 aa16.98■□□□□ 0.31
LMCD1-206ENST00000456506 ATF5Q9Y2D1 282 aaPredicted RBP16.98■□□□□ 0.31
LMCD1-206ENST00000456506 IL2RBP14784 551 aa16.97■□□□□ 0.31
LMCD1-206ENST00000456506 ANKRD24Q8TF21 1146 aa16.97■□□□□ 0.31
LMCD1-206ENST00000456506 ACSBG1Q96GR2 724 aa16.97■□□□□ 0.31
LMCD1-206ENST00000456506 MTFR1LQ9H019 292 aa16.97■□□□□ 0.31
LMCD1-206ENST00000456506 PUS7Q96PZ0 661 aaKnown RBP16.96■□□□□ 0.31
LMCD1-206ENST00000456506 CARD11Q9BXL7 1154 aa16.96■□□□□ 0.31
LMCD1-206ENST00000456506 FHDC1Q9C0D6 1143 aaPredicted RBP16.96■□□□□ 0.31
LMCD1-206ENST00000456506 LRRC4BQ9NT99 713 aa16.96■□□□□ 0.31
LMCD1-206ENST00000456506 NLRP2Q9NX02 1062 aa16.96■□□□□ 0.31
LMCD1-206ENST00000456506 MAP3K5Q99683 1374 aa16.95■□□□□ 0.3
LMCD1-206ENST00000456506 ZNF827Q17R98 1081 aa16.95■□□□□ 0.3
LMCD1-206ENST00000456506 SYT17Q9BSW7 474 aa16.95■□□□□ 0.3
LMCD1-206ENST00000456506 ITGB4P16144 1822 aa16.95■□□□□ 0.3
LMCD1-206ENST00000456506 C5P01031 1676 aa16.94■□□□□ 0.3
LMCD1-206ENST00000456506 NSD2O96028 1365 aa16.94■□□□□ 0.3
LMCD1-206ENST00000456506 TESK2Q96S53 571 aa16.94■□□□□ 0.3
LMCD1-206ENST00000456506 HDGFL2Q7Z4V5 671 aaPredicted RBP16.93■□□□□ 0.3
LMCD1-206ENST00000456506 TMC1Q8TDI8 760 aa16.93■□□□□ 0.3
LMCD1-206ENST00000456506 IP6K1Q92551 441 aa16.93■□□□□ 0.3
LMCD1-206ENST00000456506 GOLGB1Q14789 3259 aaKnown RBP16.93■□□□□ 0.3
LMCD1-206ENST00000456506 TOGARAM1Q9Y4F4 1720 aa16.93■□□□□ 0.3
LMCD1-206ENST00000456506 MEGF6O75095 1541 aa16.92■□□□□ 0.3
LMCD1-206ENST00000456506 AKT1S1Q96B36 256 aa16.92■□□□□ 0.3
LMCD1-206ENST00000456506 ANKRD26Q9UPS8 1709 aa16.92■□□□□ 0.3
LMCD1-206ENST00000456506 PKD1L3Q7Z443 1732 aa16.9■□□□□ 0.3
LMCD1-206ENST00000456506 DCAF8L1A6NGE4 600 aa16.9■□□□□ 0.3
LMCD1-206ENST00000456506 TERF2IPQ9NYB0 399 aa16.9■□□□□ 0.3
LMCD1-206ENST00000456506 MAP3K19Q56UN5 1328 aa16.89■□□□□ 0.29
LMCD1-206ENST00000456506 ANKRD36BQ8N2N9 1353 aa16.89■□□□□ 0.29
LMCD1-206ENST00000456506 ZNF784Q8NCA9 323 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms