RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 MAP3K19Q56UN5 1328 aa25.54■■□□□ 1.68
SBDSP1-205ENST00000456312 WNK3Q9BYP7 1800 aa25.53■■□□□ 1.68
SBDSP1-205ENST00000456312 DDX10Q13206 875 aaKnown RBP25.53■■□□□ 1.68
SBDSP1-205ENST00000456312 AXIN2Q9Y2T1 843 aa25.53■■□□□ 1.68
SBDSP1-205ENST00000456312 UNC5CLQ8IV45 518 aa25.52■■□□□ 1.68
SBDSP1-205ENST00000456312 BTG4Q9NY30 223 aa25.52■■□□□ 1.68
SBDSP1-205ENST00000456312 USP21Q9UK80 565 aa25.52■■□□□ 1.68
SBDSP1-205ENST00000456312 RTL1A6NKG5 1358 aa25.52■■□□□ 1.68
SBDSP1-205ENST00000456312 ZNF772Q68DY9 489 aaPredicted RBP25.51■■□□□ 1.67
SBDSP1-205ENST00000456312 KIF24Q5T7B8 1368 aa25.51■■□□□ 1.67
SBDSP1-205ENST00000456312 BLMP54132 1417 aaPredicted RBP25.5■■□□□ 1.67
SBDSP1-205ENST00000456312 RRS1Q15050 365 aaKnown RBP25.49■■□□□ 1.67
SBDSP1-205ENST00000456312 POTEAQ6S8J7 498 aa25.49■■□□□ 1.67
SBDSP1-205ENST00000456312 PHF23Q9BUL5 403 aaPredicted RBP25.49■■□□□ 1.67
SBDSP1-205ENST00000456312 CC2D1BQ5T0F9 858 aaKnown RBP25.47■■□□□ 1.67
SBDSP1-205ENST00000456312 IP6K1Q92551 441 aa25.47■■□□□ 1.67
SBDSP1-205ENST00000456312 POLKQ9UBT6 870 aa25.47■■□□□ 1.67
SBDSP1-205ENST00000456312 MORC1Q86VD1 984 aa25.46■■□□□ 1.67
SBDSP1-205ENST00000456312 HOXC9P31274 260 aa25.45■■□□□ 1.66
SBDSP1-205ENST00000456312 VPS72Q15906 364 aa25.45■■□□□ 1.66
SBDSP1-205ENST00000456312 EMILIN1Q9Y6C2 1016 aa25.45■■□□□ 1.66
SBDSP1-205ENST00000456312 CDK12Q9NYV4 1490 aaPredicted RBP25.45■■□□□ 1.66
SBDSP1-205ENST00000456312 FLT4P35916 1363 aa25.44■■□□□ 1.66
SBDSP1-205ENST00000456312 PARD3Q8TEW0 1356 aa25.44■■□□□ 1.66
SBDSP1-205ENST00000456312 TRPC5Q9UL62 973 aaPredicted RBP25.44■■□□□ 1.66
SBDSP1-205ENST00000456312 THSD7AQ9UPZ6 1657 aa25.44■■□□□ 1.66
SBDSP1-205ENST00000456312 ERBB3P21860 1342 aa25.43■■□□□ 1.66
SBDSP1-205ENST00000456312 ZBTB7CA1YPR0 619 aa25.42■■□□□ 1.66
SBDSP1-205ENST00000456312 QTRT2Q9H974 415 aaKnown RBP25.42■■□□□ 1.66
SBDSP1-205ENST00000456312 INSRP06213 1382 aa25.42■■□□□ 1.66
SBDSP1-205ENST00000456312 BRWD3Q6RI45 1802 aa25.42■■□□□ 1.66
SBDSP1-205ENST00000456312 WDR17Q8IZU2 1322 aa25.41■■□□□ 1.66
SBDSP1-205ENST00000456312 RGPD1P0DJD0 1748 aa25.41■■□□□ 1.66
SBDSP1-205ENST00000456312 CRB1P82279 1406 aa25.41■■□□□ 1.66
SBDSP1-205ENST00000456312 SPATA31A5Q5VU36 1347 aa25.4■■□□□ 1.66
SBDSP1-205ENST00000456312 SPATA31A7Q8IWB4 1347 aa25.4■■□□□ 1.66
SBDSP1-205ENST00000456312 TNNT2P45379 298 aaPredicted RBP25.4■■□□□ 1.66
SBDSP1-205ENST00000456312 LARP1Q6PKG0 1096 aaKnown RBP25.39■■□□□ 1.66
SBDSP1-205ENST00000456312 GJD4Q96KN9 370 aaPredicted RBP25.39■■□□□ 1.66
SBDSP1-205ENST00000456312 SPATA31A1Q5TZJ5 1347 aa25.38■■□□□ 1.65
SBDSP1-205ENST00000456312 PARP4Q9UKK3 1724 aaKnown RBP25.38■■□□□ 1.65
SBDSP1-205ENST00000456312 AMPHP49418 695 aa25.38■■□□□ 1.65
SBDSP1-205ENST00000456312 STRN4Q9NRL3 753 aa25.38■■□□□ 1.65
SBDSP1-205ENST00000456312 COL3A1P02461 1466 aaPredicted RBP25.38■■□□□ 1.65
SBDSP1-205ENST00000456312 HSP90AB2PQ58FF8 381 aa25.37■■□□□ 1.65
SBDSP1-205ENST00000456312 NCAPD2Q15021 1401 aa25.37■■□□□ 1.65
SBDSP1-205ENST00000456312 RBM6P78332 1123 aaKnown RBP25.36■■□□□ 1.65
SBDSP1-205ENST00000456312 ANKRD24Q8TF21 1146 aa25.35■■□□□ 1.65
SBDSP1-205ENST00000456312 RGS12O14924 1447 aa25.35■■□□□ 1.65
SBDSP1-205ENST00000456312 DISP2A7MBM2 1401 aa25.33■■□□□ 1.65
SBDSP1-205ENST00000456312 ONECUT3O60422 494 aaPredicted RBP25.33■■□□□ 1.65
SBDSP1-205ENST00000456312 EVA1CP58658 441 aa25.33■■□□□ 1.65
SBDSP1-205ENST00000456312 LRRC37A3O60309 1634 aa25.33■■□□□ 1.65
SBDSP1-205ENST00000456312 CARD10Q9BWT7 1032 aa25.32■■□□□ 1.64
SBDSP1-205ENST00000456312 RXRBP28702 533 aa25.31■■□□□ 1.64
SBDSP1-205ENST00000456312 MTHFSP49914 203 aa25.31■■□□□ 1.64
SBDSP1-205ENST00000456312 SHANK3Q9BYB0 1731 aa25.31■■□□□ 1.64
SBDSP1-205ENST00000456312 PPP2R1AP30153 589 aa25.3■■□□□ 1.64
SBDSP1-205ENST00000456312 CNGB1Q14028 1251 aaPredicted RBP25.3■■□□□ 1.64
SBDSP1-205ENST00000456312 BARGINQ6ZT62 677 aa25.29■■□□□ 1.64
SBDSP1-205ENST00000456312 PPM1GO15355 546 aaPredicted RBP25.28■■□□□ 1.64
SBDSP1-205ENST00000456312 TOM1L2Q6ZVM7 507 aa25.28■■□□□ 1.64
SBDSP1-205ENST00000456312 THRAP3Q9Y2W1 955 aaKnown RBP25.28■■□□□ 1.64
SBDSP1-205ENST00000456312 EIF4A2Q14240 407 aaKnown RBP25.27■■□□□ 1.64
SBDSP1-205ENST00000456312 RALBP1Q15311 655 aa25.27■■□□□ 1.64
SBDSP1-205ENST00000456312 TCP11L2Q8N4U5 519 aa25.27■■□□□ 1.64
SBDSP1-205ENST00000456312 LTV1Q96GA3 475 aaPredicted RBP25.26■■□□□ 1.63
SBDSP1-205ENST00000456312 PRKRIP1Q9H875 184 aaPredicted RBP25.26■■□□□ 1.63
SBDSP1-205ENST00000456312 CSB-PGBD3P0DP91 1061 aa25.25■■□□□ 1.63
SBDSP1-205ENST00000456312 NBPF6Q5VWK0 638 aa25.25■■□□□ 1.63
SBDSP1-205ENST00000456312 NBPF4Q96M43 638 aa25.25■■□□□ 1.63
SBDSP1-205ENST00000456312 CCDC9Q9Y3X0 531 aaKnown RBP25.25■■□□□ 1.63
SBDSP1-205ENST00000456312 PKD1L3Q7Z443 1732 aa25.25■■□□□ 1.63
SBDSP1-205ENST00000456312 IL13P35225 146 aa25.23■■□□□ 1.63
SBDSP1-205ENST00000456312 FAM98CQ17RN3 349 aaKnown RBP25.23■■□□□ 1.63
SBDSP1-205ENST00000456312 USP35Q9P2H5 1018 aa25.23■■□□□ 1.63
SBDSP1-205ENST00000456312 IGSF1Q8N6C5 1336 aa25.22■■□□□ 1.63
SBDSP1-205ENST00000456312 NLRP2Q9NX02 1062 aa25.22■■□□□ 1.63
SBDSP1-205ENST00000456312 MEGF6O75095 1541 aa25.22■■□□□ 1.63
SBDSP1-205ENST00000456312 EYA1Q99502 592 aa25.21■■□□□ 1.63
SBDSP1-205ENST00000456312 MYBBP1AQ9BQG0 1328 aaKnown RBP25.19■■□□□ 1.62
SBDSP1-205ENST00000456312 EP400Q96L91 3159 aa25.19■■□□□ 1.62
SBDSP1-205ENST00000456312 SEPT12Q8IYM1 358 aa25.19■■□□□ 1.62
SBDSP1-205ENST00000456312 KDRP35968 1356 aa25.18■■□□□ 1.62
SBDSP1-205ENST00000456312 SBF2Q86WG5 1849 aa25.18■■□□□ 1.62
SBDSP1-205ENST00000456312 TNS2Q63HR2 1409 aa25.17■■□□□ 1.62
SBDSP1-205ENST00000456312 OVOS2A0A0G2JMS6 1433 aa25.16■■□□□ 1.62
SBDSP1-205ENST00000456312 USHBP1Q8N6Y0 703 aa25.16■■□□□ 1.62
SBDSP1-205ENST00000456312 CDCA7Q9BWT1 371 aaPredicted RBP25.15■■□□□ 1.62
SBDSP1-205ENST00000456312 PLEKHG2Q9H7P9 1386 aa25.14■■□□□ 1.61
SBDSP1-205ENST00000456312 DIAPH1O60610 1272 aaKnown RBP25.13■■□□□ 1.61
SBDSP1-205ENST00000456312 IL2RBP14784 551 aa25.13■■□□□ 1.61
SBDSP1-205ENST00000456312 VIRMAQ69YN4 1812 aaKnown RBP25.12■■□□□ 1.61
SBDSP1-205ENST00000456312 AEBP1Q8IUX7 1158 aa25.09■■□□□ 1.61
SBDSP1-205ENST00000456312 CFAP53Q96M91 514 aa25.09■■□□□ 1.61
SBDSP1-205ENST00000456312 BCL9O00512 1426 aa25.06■■□□□ 1.6
SBDSP1-205ENST00000456312 DDB1Q16531 1140 aa25.06■■□□□ 1.6
SBDSP1-205ENST00000456312 KRT27Q7Z3Y8 459 aa25.06■■□□□ 1.6
SBDSP1-205ENST00000456312 ANP32CO43423 234 aa25.05■■□□□ 1.6
SBDSP1-205ENST00000456312 TNS1Q9HBL0 1735 aaKnown RBP25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms