RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 WNK3Q9BYP7 1800 aa30.86■■■□□ 2.53
SEC22C-213ENST00000456222 KCNH5Q8NCM2 988 aa30.85■■■□□ 2.53
SEC22C-213ENST00000456222 TMC1Q8TDI8 760 aa30.85■■■□□ 2.53
SEC22C-213ENST00000456222 USP54Q70EL1 1684 aa30.84■■■□□ 2.53
SEC22C-213ENST00000456222 NME9Q86XW9 330 aa30.84■■■□□ 2.53
SEC22C-213ENST00000456222 WDR17Q8IZU2 1322 aa30.83■■■□□ 2.53
SEC22C-213ENST00000456222 TOM1L2Q6ZVM7 507 aa30.83■■■□□ 2.53
SEC22C-213ENST00000456222 CAMKK2Q96RR4 588 aa30.83■■■□□ 2.53
SEC22C-213ENST00000456222 TESK2Q96S53 571 aa30.83■■■□□ 2.53
SEC22C-213ENST00000456222 PEAK1Q9H792 1746 aa30.83■■■□□ 2.53
SEC22C-213ENST00000456222 USP31Q70CQ4 1352 aa30.81■■■□□ 2.52
SEC22C-213ENST00000456222 APBA3O96018 575 aa30.81■■■□□ 2.52
SEC22C-213ENST00000456222 ST20-MTHFSA0A0A6YYL1 179 aa30.79■■■□□ 2.52
SEC22C-213ENST00000456222 A0A1W2PP64 1363 aa30.79■■■□□ 2.52
SEC22C-213ENST00000456222 RREB1Q92766 1687 aa30.78■■■□□ 2.52
SEC22C-213ENST00000456222 SBF2Q86WG5 1849 aa30.77■■■□□ 2.52
SEC22C-213ENST00000456222 LRP5O75197 1615 aa30.77■■■□□ 2.52
SEC22C-213ENST00000456222 LTN1O94822 1766 aa30.77■■■□□ 2.52
SEC22C-213ENST00000456222 EDC4Q6P2E9 1401 aaKnown RBP30.76■■■□□ 2.51
SEC22C-213ENST00000456222 R3HDM1Q15032 1099 aaKnown RBP30.76■■■□□ 2.51
SEC22C-213ENST00000456222 HDGFL2Q7Z4V5 671 aaPredicted RBP30.75■■■□□ 2.51
SEC22C-213ENST00000456222 NUP188Q5SRE5 1749 aa30.74■■■□□ 2.51
SEC22C-213ENST00000456222 OVOS2A0A0G2JMS6 1433 aa30.73■■■□□ 2.51
SEC22C-213ENST00000456222 OVOS2A0A0J9YW53 1432 aa30.73■■■□□ 2.51
SEC22C-213ENST00000456222 OVOS2Q6IE36 1432 aa30.73■■■□□ 2.51
SEC22C-213ENST00000456222 ABCC6O95255 1503 aa30.73■■■□□ 2.51
SEC22C-213ENST00000456222 CSB-PGBD3P0DP91 1061 aa30.73■■■□□ 2.51
SEC22C-213ENST00000456222 DDB1Q16531 1140 aa30.73■■■□□ 2.51
SEC22C-213ENST00000456222 PUS7Q96PZ0 661 aaKnown RBP30.73■■■□□ 2.51
SEC22C-213ENST00000456222 CARD10Q9BWT7 1032 aa30.73■■■□□ 2.51
SEC22C-213ENST00000456222 PTF1AQ7RTS3 328 aa30.71■■■□□ 2.51
SEC22C-213ENST00000456222 TERF2IPQ9NYB0 399 aa30.71■■■□□ 2.51
SEC22C-213ENST00000456222 PARD3Q8TEW0 1356 aa30.7■■■□□ 2.51
SEC22C-213ENST00000456222 MARCH10Q8NA82 808 aaPredicted RBP30.7■■■□□ 2.51
SEC22C-213ENST00000456222 ERBB3P21860 1342 aa30.65■■■□□ 2.5
SEC22C-213ENST00000456222 USP47Q96K76 1375 aa30.65■■■□□ 2.5
SEC22C-213ENST00000456222 CDCA7Q9BWT1 371 aaPredicted RBP30.64■■■□□ 2.5
SEC22C-213ENST00000456222 CCDC7Q96M83 1385 aa30.63■■■□□ 2.49
SEC22C-213ENST00000456222 NINLQ9Y2I6 1382 aa30.63■■■□□ 2.49
SEC22C-213ENST00000456222 C11orf95C9JLR9 678 aaPredicted RBP30.61■■■□□ 2.49
SEC22C-213ENST00000456222 RGPD3A6NKT7 1758 aaPredicted RBP30.59■■■□□ 2.49
SEC22C-213ENST00000456222 RGPD4Q7Z3J3 1758 aa30.59■■■□□ 2.49
SEC22C-213ENST00000456222 BCL9O00512 1426 aa30.59■■■□□ 2.49
SEC22C-213ENST00000456222 TNS2Q63HR2 1409 aa30.59■■■□□ 2.49
SEC22C-213ENST00000456222 ANKRD24Q8TF21 1146 aa30.59■■■□□ 2.49
SEC22C-213ENST00000456222 NLRP2Q9NX02 1062 aa30.59■■■□□ 2.49
SEC22C-213ENST00000456222 FBLN1P23142 703 aa30.57■■■□□ 2.48
SEC22C-213ENST00000456222 BCL11BQ9C0K0 894 aaPredicted RBP30.57■■■□□ 2.48
SEC22C-213ENST00000456222 ANKRD36BQ8N2N9 1353 aa30.56■■■□□ 2.48
SEC22C-213ENST00000456222 EXOC5O00471 708 aa30.56■■■□□ 2.48
SEC22C-213ENST00000456222 PLSCR1O15162 318 aa30.53■■■□□ 2.48
SEC22C-213ENST00000456222 TMF1P82094 1093 aa30.53■■■□□ 2.48
SEC22C-213ENST00000456222 SLC24A1O60721 1099 aa30.52■■■□□ 2.48
SEC22C-213ENST00000456222 PROM2Q8N271 834 aa30.52■■■□□ 2.48
SEC22C-213ENST00000456222 IP6K1Q92551 441 aa30.52■■■□□ 2.48
SEC22C-213ENST00000456222 PCGF6Q9BYE7 350 aa30.52■■■□□ 2.48
SEC22C-213ENST00000456222 MAP3K19Q56UN5 1328 aa30.51■■■□□ 2.48
SEC22C-213ENST00000456222 COG3Q96JB2 828 aa30.51■■■□□ 2.47
SEC22C-213ENST00000456222 KCNQ2O43526 872 aa30.5■■■□□ 2.47
SEC22C-213ENST00000456222 NBPF14Q5TI25 921 aa30.5■■■□□ 2.47
SEC22C-213ENST00000456222 LTV1Q96GA3 475 aaPredicted RBP30.5■■■□□ 2.47
SEC22C-213ENST00000456222 ANO8Q9HCE9 1232 aaPredicted RBP30.5■■■□□ 2.47
SEC22C-213ENST00000456222 RGPD2P0DJD1 1756 aa30.49■■■□□ 2.47
SEC22C-213ENST00000456222 IL2RBP14784 551 aa30.49■■■□□ 2.47
SEC22C-213ENST00000456222 MYOM1P52179 1685 aa30.48■■■□□ 2.47
SEC22C-213ENST00000456222 NHSQ6T4R5 1651 aa30.48■■■□□ 2.47
SEC22C-213ENST00000456222 FAM208AQ9UK61 1670 aaKnown RBP30.47■■■□□ 2.47
SEC22C-213ENST00000456222 FYB1O15117 783 aa30.46■■■□□ 2.47
SEC22C-213ENST00000456222 GGNBP2Q9H3C7 697 aa30.46■■■□□ 2.47
SEC22C-213ENST00000456222 KAT6BQ8WYB5 2073 aa30.45■■■□□ 2.47
SEC22C-213ENST00000456222 HOXC9P31274 260 aa30.45■■■□□ 2.47
SEC22C-213ENST00000456222 ACSBG1Q96GR2 724 aa30.44■■■□□ 2.46
SEC22C-213ENST00000456222 KIF20BQ96Q89 1820 aa30.43■■■□□ 2.46
SEC22C-213ENST00000456222 RRS1Q15050 365 aaKnown RBP30.42■■■□□ 2.46
SEC22C-213ENST00000456222 TIMELESSQ9UNS1 1208 aa30.41■■■□□ 2.46
SEC22C-213ENST00000456222 BTAF1O14981 1849 aa30.4■■■□□ 2.46
SEC22C-213ENST00000456222 AMPHP49418 695 aa30.4■■■□□ 2.46
SEC22C-213ENST00000456222 TXNRD1Q16881 649 aa30.4■■■□□ 2.46
SEC22C-213ENST00000456222 PDGFDQ9GZP0 370 aaPredicted RBP30.4■■■□□ 2.46
SEC22C-213ENST00000456222 CASZ1Q86V15 1759 aa30.4■■■□□ 2.46
SEC22C-213ENST00000456222 CLSPNQ9HAW4 1339 aa30.4■■■□□ 2.46
SEC22C-213ENST00000456222 CARD14Q9BXL6 1004 aa30.39■■■□□ 2.46
SEC22C-213ENST00000456222 SHANK3Q9BYB0 1731 aa30.37■■■□□ 2.45
SEC22C-213ENST00000456222 CDCA8Q53HL2 280 aa30.36■■■□□ 2.45
SEC22C-213ENST00000456222 MEGF6O75095 1541 aa30.34■■■□□ 2.45
SEC22C-213ENST00000456222 RTL1A6NKG5 1358 aa30.34■■■□□ 2.45
SEC22C-213ENST00000456222 DDX54Q8TDD1 881 aaKnown RBP30.33■■■□□ 2.45
SEC22C-213ENST00000456222 NSD3Q9BZ95 1437 aa30.32■■■□□ 2.44
SEC22C-213ENST00000456222 NBPF6Q5VWK0 638 aa30.31■■■□□ 2.44
SEC22C-213ENST00000456222 NBPF4Q96M43 638 aa30.31■■■□□ 2.44
SEC22C-213ENST00000456222 SPON1Q9HCB6 807 aa30.31■■■□□ 2.44
SEC22C-213ENST00000456222 USHBP1Q8N6Y0 703 aa30.3■■■□□ 2.44
SEC22C-213ENST00000456222 PAPPAQ13219 1627 aa30.29■■■□□ 2.44
SEC22C-213ENST00000456222 DOT1LQ8TEK3 1739 aa30.28■■■□□ 2.44
SEC22C-213ENST00000456222 HSP90AB2PQ58FF8 381 aa30.28■■■□□ 2.44
SEC22C-213ENST00000456222 SLC15A2Q16348 729 aa30.26■■■□□ 2.43
SEC22C-213ENST00000456222 STK32BQ9NY57 414 aa30.26■■■□□ 2.43
SEC22C-213ENST00000456222 ZBTB7AO95365 584 aa30.25■■■□□ 2.43
SEC22C-213ENST00000456222 ZCRB1Q8TBF4 217 aaKnown RBP30.24■■■□□ 2.43
SEC22C-213ENST00000456222 LRRC4BQ9NT99 713 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms