RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 LMO7Q8WWI1 1683 aa14.26□□□□□ -0.13
TOP3B-212ENST00000456075 COL5A2P05997 1499 aaPredicted RBP14.25□□□□□ -0.13
TOP3B-212ENST00000456075 FYB1O15117 783 aa14.25□□□□□ -0.13
TOP3B-212ENST00000456075 USP54Q70EL1 1684 aa14.25□□□□□ -0.13
TOP3B-212ENST00000456075 TCP11L2Q8N4U5 519 aa14.24□□□□□ -0.13
TOP3B-212ENST00000456075 CARD14Q9BXL6 1004 aa14.24□□□□□ -0.13
TOP3B-212ENST00000456075 CRB1P82279 1406 aa14.24□□□□□ -0.13
TOP3B-212ENST00000456075 WDR17Q8IZU2 1322 aa14.23□□□□□ -0.13
TOP3B-212ENST00000456075 ONECUT3O60422 494 aaPredicted RBP14.23□□□□□ -0.13
TOP3B-212ENST00000456075 AMPHP49418 695 aa14.23□□□□□ -0.13
TOP3B-212ENST00000456075 KRT27Q7Z3Y8 459 aa14.23□□□□□ -0.13
TOP3B-212ENST00000456075 PANK3Q9H999 370 aa14.23□□□□□ -0.13
TOP3B-212ENST00000456075 AXIN2Q9Y2T1 843 aa14.23□□□□□ -0.13
TOP3B-212ENST00000456075 THRAP3Q9Y2W1 955 aaKnown RBP14.23□□□□□ -0.13
TOP3B-212ENST00000456075 KIF7Q2M1P5 1343 aa14.22□□□□□ -0.13
TOP3B-212ENST00000456075 ABCC6O95255 1503 aa14.22□□□□□ -0.13
TOP3B-212ENST00000456075 C11orf95C9JLR9 678 aaPredicted RBP14.22□□□□□ -0.13
TOP3B-212ENST00000456075 KIF20BQ96Q89 1820 aa14.21□□□□□ -0.13
TOP3B-212ENST00000456075 BARGINQ6ZT62 677 aa14.21□□□□□ -0.13
TOP3B-212ENST00000456075 UPF1Q92900 1129 aaKnown RBP eCLIP14.21□□□□□ -0.13
TOP3B-212ENST00000456075 EP400Q96L91 3159 aa14.2□□□□□ -0.14
TOP3B-212ENST00000456075 PDE3BQ13370 1112 aa14.2□□□□□ -0.14
TOP3B-212ENST00000456075 NLRP2Q9NX02 1062 aa14.2□□□□□ -0.14
TOP3B-212ENST00000456075 KNSTRNQ9Y448 316 aa14.2□□□□□ -0.14
TOP3B-212ENST00000456075 LTN1O94822 1766 aa14.19□□□□□ -0.14
TOP3B-212ENST00000456075 MAP3K19Q56UN5 1328 aa14.19□□□□□ -0.14
TOP3B-212ENST00000456075 BLMP54132 1417 aaPredicted RBP14.19□□□□□ -0.14
TOP3B-212ENST00000456075 RRS1Q15050 365 aaKnown RBP14.19□□□□□ -0.14
TOP3B-212ENST00000456075 ANKRD24Q8TF21 1146 aa14.19□□□□□ -0.14
TOP3B-212ENST00000456075 IP6K1Q92551 441 aa14.19□□□□□ -0.14
TOP3B-212ENST00000456075 LTV1Q96GA3 475 aaPredicted RBP14.19□□□□□ -0.14
TOP3B-212ENST00000456075 COL18A1P39060 1754 aa14.19□□□□□ -0.14
TOP3B-212ENST00000456075 ERBB3P21860 1342 aa14.18□□□□□ -0.14
TOP3B-212ENST00000456075 SF3B2Q13435 895 aaKnown RBP14.18□□□□□ -0.14
TOP3B-212ENST00000456075 CARD10Q9BWT7 1032 aa14.18□□□□□ -0.14
TOP3B-212ENST00000456075 PPM1GO15355 546 aaPredicted RBP14.17□□□□□ -0.14
TOP3B-212ENST00000456075 FBLN1P23142 703 aa14.17□□□□□ -0.14
TOP3B-212ENST00000456075 HOXC9P31274 260 aa14.17□□□□□ -0.14
TOP3B-212ENST00000456075 CDCA7Q9BWT1 371 aaPredicted RBP14.17□□□□□ -0.14
TOP3B-212ENST00000456075 RTL1A6NKG5 1358 aa14.17□□□□□ -0.14
TOP3B-212ENST00000456075 CCDC7Q96M83 1385 aa14.17□□□□□ -0.14
TOP3B-212ENST00000456075 SMG6Q86US8 1419 aaKnown RBP14.16□□□□□ -0.14
TOP3B-212ENST00000456075 CCDC125Q86Z20 511 aa14.16□□□□□ -0.14
TOP3B-212ENST00000456075 NSD2O96028 1365 aa14.16□□□□□ -0.14
TOP3B-212ENST00000456075 THSD7AQ9UPZ6 1657 aa14.16□□□□□ -0.14
TOP3B-212ENST00000456075 BRWD3Q6RI45 1802 aa14.15□□□□□ -0.14
TOP3B-212ENST00000456075 RGPD5Q99666 1765 aa14.15□□□□□ -0.14
TOP3B-212ENST00000456075 TNNT2P45379 298 aaPredicted RBP14.15□□□□□ -0.14
TOP3B-212ENST00000456075 DDB1Q16531 1140 aa14.15□□□□□ -0.14
TOP3B-212ENST00000456075 WASHC2AQ641Q2 1341 aa14.15□□□□□ -0.15
TOP3B-212ENST00000456075 FLT4P35916 1363 aa14.14□□□□□ -0.15
TOP3B-212ENST00000456075 MORC1Q86VD1 984 aa14.14□□□□□ -0.15
TOP3B-212ENST00000456075 KIF24Q5T7B8 1368 aa14.13□□□□□ -0.15
TOP3B-212ENST00000456075 ZEB1P37275 1124 aaPredicted RBP14.13□□□□□ -0.15
TOP3B-212ENST00000456075 FAM182BQ5T319 152 aa14.13□□□□□ -0.15
TOP3B-212ENST00000456075 FAM196AQ6ZSG2 479 aa14.13□□□□□ -0.15
TOP3B-212ENST00000456075 EMILIN1Q9Y6C2 1016 aa14.12□□□□□ -0.15
TOP3B-212ENST00000456075 EXOC5O00471 708 aa14.11□□□□□ -0.15
TOP3B-212ENST00000456075 IL2RBP14784 551 aa14.11□□□□□ -0.15
TOP3B-212ENST00000456075 INSRP06213 1382 aa14.1□□□□□ -0.15
TOP3B-212ENST00000456075 PARP4Q9UKK3 1724 aaKnown RBP14.1□□□□□ -0.15
TOP3B-212ENST00000456075 HSP90AB2PQ58FF8 381 aa14.1□□□□□ -0.15
TOP3B-212ENST00000456075 FAM208AQ9UK61 1670 aaKnown RBP14.1□□□□□ -0.15
TOP3B-212ENST00000456075 ANKRD26Q9UPS8 1709 aa14.1□□□□□ -0.15
TOP3B-212ENST00000456075 CNGB1Q14028 1251 aaPredicted RBP14.09□□□□□ -0.15
TOP3B-212ENST00000456075 OVOS2A0A0G2JMS6 1433 aa14.08□□□□□ -0.15
TOP3B-212ENST00000456075 BAG6P46379 1132 aa14.08□□□□□ -0.16
TOP3B-212ENST00000456075 AMER1Q5JTC6 1135 aaPredicted RBP14.08□□□□□ -0.16
TOP3B-212ENST00000456075 CC2D1BQ5T0F9 858 aaKnown RBP14.08□□□□□ -0.16
TOP3B-212ENST00000456075 POLKQ9UBT6 870 aa14.08□□□□□ -0.16
TOP3B-212ENST00000456075 LRRC37A3O60309 1634 aa14.08□□□□□ -0.16
TOP3B-212ENST00000456075 DISP2A7MBM2 1401 aa14.07□□□□□ -0.16
TOP3B-212ENST00000456075 WNK3Q9BYP7 1800 aa14.07□□□□□ -0.16
TOP3B-212ENST00000456075 TRIM37O94972 964 aa14.07□□□□□ -0.16
TOP3B-212ENST00000456075 RAPGEF4Q8WZA2 1011 aa14.07□□□□□ -0.16
TOP3B-212ENST00000456075 TNS2Q63HR2 1409 aa14.07□□□□□ -0.16
TOP3B-212ENST00000456075 NBPF6Q5VWK0 638 aa14.06□□□□□ -0.16
TOP3B-212ENST00000456075 USHBP1Q8N6Y0 703 aa14.06□□□□□ -0.16
TOP3B-212ENST00000456075 NBPF4Q96M43 638 aa14.06□□□□□ -0.16
TOP3B-212ENST00000456075 PEAK1Q9H792 1746 aa14.06□□□□□ -0.16
TOP3B-212ENST00000456075 PER1O15534 1290 aaPredicted RBP14.05□□□□□ -0.16
TOP3B-212ENST00000456075 TATP17735 454 aaPredicted RBP14.04□□□□□ -0.16
TOP3B-212ENST00000456075 DEFB132Q7Z7B7 95 aa14.04□□□□□ -0.16
TOP3B-212ENST00000456075 MARCH10Q8NA82 808 aaPredicted RBP14.04□□□□□ -0.16
TOP3B-212ENST00000456075 DDX54Q8TDD1 881 aaKnown RBP14.04□□□□□ -0.16
TOP3B-212ENST00000456075 RGPD1P0DJD0 1748 aa14.04□□□□□ -0.16
TOP3B-212ENST00000456075 MAP2P11137 1827 aaKnown RBP14.04□□□□□ -0.16
TOP3B-212ENST00000456075 APBA3O96018 575 aa14.03□□□□□ -0.16
TOP3B-212ENST00000456075 NPC1L1Q9UHC9 1359 aa14.02□□□□□ -0.17
TOP3B-212ENST00000456075 ZCRB1Q8TBF4 217 aaKnown RBP14.02□□□□□ -0.17
TOP3B-212ENST00000456075 EN1Q05925 392 aaPredicted RBP14.01□□□□□ -0.17
TOP3B-212ENST00000456075 EIF4A2Q14240 407 aaKnown RBP14.01□□□□□ -0.17
TOP3B-212ENST00000456075 MEGF6O75095 1541 aa14□□□□□ -0.17
TOP3B-212ENST00000456075 EYA1Q99502 592 aa14□□□□□ -0.17
TOP3B-212ENST00000456075 RGPD2P0DJD1 1756 aa14□□□□□ -0.17
TOP3B-212ENST00000456075 MTHFSP49914 203 aa13.99□□□□□ -0.17
TOP3B-212ENST00000456075 BCL11BQ9C0K0 894 aaPredicted RBP13.99□□□□□ -0.17
TOP3B-212ENST00000456075 BCL9O00512 1426 aa13.98□□□□□ -0.17
TOP3B-212ENST00000456075 PCDH11XQ9BZA7 1347 aa13.98□□□□□ -0.17
TOP3B-212ENST00000456075 PCDH11YQ9BZA8 1340 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms