RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 SV2AQ7L0J3 742 aa8.66□□□□□ -1.02
R3HDM1-212ENST00000456040 CCDC155Q8N6L0 562 aa8.66□□□□□ -1.02
R3HDM1-212ENST00000456040 HRCP23327 699 aa8.65□□□□□ -1.02
R3HDM1-212ENST00000456040 MAP3K10Q02779 954 aa8.65□□□□□ -1.02
R3HDM1-212ENST00000456040 TPRNQ4KMQ1 711 aa8.65□□□□□ -1.02
R3HDM1-212ENST00000456040 MAGEB6P1A0A0J9YX57 407 aa8.64□□□□□ -1.03
R3HDM1-212ENST00000456040 CDC14CA4D256 554 aa8.64□□□□□ -1.03
R3HDM1-212ENST00000456040 C4orf48Q5BLP8 95 aa8.64□□□□□ -1.03
R3HDM1-212ENST00000456040 NUTM2BA6NNL0 878 aaPredicted RBP8.63□□□□□ -1.03
R3HDM1-212ENST00000456040 NUTM2EB1AL46 878 aaPredicted RBP8.63□□□□□ -1.03
R3HDM1-212ENST00000456040 NUTM2DQ5VT03 806 aaPredicted RBP8.63□□□□□ -1.03
R3HDM1-212ENST00000456040 NUTM2AQ8IVF1 878 aaPredicted RBP8.63□□□□□ -1.03
R3HDM1-212ENST00000456040 ENAMQ9NRM1 1142 aa8.63□□□□□ -1.03
R3HDM1-212ENST00000456040 PCDHB15Q9Y5E8 787 aa8.63□□□□□ -1.03
R3HDM1-212ENST00000456040 SLURP2P0DP57 97 aa8.62□□□□□ -1.03
R3HDM1-212ENST00000456040 RIC3Q7Z5B4 369 aa8.62□□□□□ -1.03
R3HDM1-212ENST00000456040 TRMT44Q8IYL2 757 aaKnown RBP8.62□□□□□ -1.03
R3HDM1-212ENST00000456040 VWA5B2Q8N398 1253 aa8.62□□□□□ -1.03
R3HDM1-212ENST00000456040 ITGA6P23229 1130 aa8.61□□□□□ -1.03
R3HDM1-212ENST00000456040 CSPP1Q1MSJ5 1256 aa8.61□□□□□ -1.03
R3HDM1-212ENST00000456040 C1QTNF2Q9BXJ5 285 aa8.61□□□□□ -1.03
R3HDM1-212ENST00000456040 SPINT1O43278 529 aa8.6□□□□□ -1.03
R3HDM1-212ENST00000456040 DHX9Q08211 1270 aaKnown RBP8.6□□□□□ -1.03
R3HDM1-212ENST00000456040 HELBQ8NG08 1087 aaPredicted RBP8.6□□□□□ -1.03
R3HDM1-212ENST00000456040 GPKOWQ92917 476 aaPredicted RBP eCLIP8.6□□□□□ -1.03
R3HDM1-212ENST00000456040 ARHGEF15O94989 841 aa8.59□□□□□ -1.03
R3HDM1-212ENST00000456040 PPP1R26Q5T8A7 1209 aaPredicted RBP8.59□□□□□ -1.03
R3HDM1-212ENST00000456040 CARD14Q9BXL6 1004 aa8.59□□□□□ -1.03
R3HDM1-212ENST00000456040 KDM4CQ9H3R0 1056 aa8.59□□□□□ -1.03
R3HDM1-212ENST00000456040 CDV3Q9UKY7 258 aaKnown RBP8.59□□□□□ -1.03
R3HDM1-212ENST00000456040 SLC35F4A4IF30 521 aa8.58□□□□□ -1.04
R3HDM1-212ENST00000456040 RNFT1Q5M7Z0 435 aa8.58□□□□□ -1.04
R3HDM1-212ENST00000456040 SH3RF1Q7Z6J0 888 aa8.58□□□□□ -1.04
R3HDM1-212ENST00000456040 CABLES1Q8TDN4 633 aa8.58□□□□□ -1.04
R3HDM1-212ENST00000456040 GPBP1L1Q9HC44 474 aaPredicted RBP8.58□□□□□ -1.04
R3HDM1-212ENST00000456040 PHF20L1A8MW92 1017 aa8.57□□□□□ -1.04
R3HDM1-212ENST00000456040 PER1O15534 1290 aaPredicted RBP8.57□□□□□ -1.04
R3HDM1-212ENST00000456040 Q6ZVU0 165 aa8.57□□□□□ -1.04
R3HDM1-212ENST00000456040 MSTNO14793 375 aa8.56□□□□□ -1.04
R3HDM1-212ENST00000456040 SH3BP5LQ7L8J4 393 aa8.56□□□□□ -1.04
R3HDM1-212ENST00000456040 WHAMMQ8TF30 809 aa8.56□□□□□ -1.04
R3HDM1-212ENST00000456040 RSPH6AQ9H0K4 717 aa8.56□□□□□ -1.04
R3HDM1-212ENST00000456040 POLMQ9NP87 494 aaPredicted RBP8.56□□□□□ -1.04
R3HDM1-212ENST00000456040 ADAMTS2O95450 1211 aa8.55□□□□□ -1.04
R3HDM1-212ENST00000456040 CBLBQ13191 982 aa8.55□□□□□ -1.04
R3HDM1-212ENST00000456040 SLC10A4Q96EP9 437 aa8.55□□□□□ -1.04
R3HDM1-212ENST00000456040 DDRGK1Q96HY6 314 aa8.55□□□□□ -1.04
R3HDM1-212ENST00000456040 SRSF11Q05519 484 aaKnown RBP8.54□□□□□ -1.04
R3HDM1-212ENST00000456040 NEUROD2Q15784 382 aa8.54□□□□□ -1.04
R3HDM1-212ENST00000456040 MYSM1Q5VVJ2 828 aa8.54□□□□□ -1.04
R3HDM1-212ENST00000456040 PODNQ7Z5L7 613 aa8.54□□□□□ -1.04
R3HDM1-212ENST00000456040 RELBQ01201 579 aa8.53□□□□□ -1.04
R3HDM1-212ENST00000456040 FOXR1Q6PIV2 292 aa8.53□□□□□ -1.04
R3HDM1-212ENST00000456040 BEND7Q8N7W2 519 aaPredicted RBP8.53□□□□□ -1.04
R3HDM1-212ENST00000456040 TRIM52Q96A61 297 aa8.53□□□□□ -1.04
R3HDM1-212ENST00000456040 ARHGAP9Q9BRR9 750 aa8.53□□□□□ -1.04
R3HDM1-212ENST00000456040 ERFEQ4G0M1 354 aa8.52□□□□□ -1.05
R3HDM1-212ENST00000456040 ZBTB33Q86T24 672 aa8.52□□□□□ -1.05
R3HDM1-212ENST00000456040 KCTD15Q96SI1 283 aaPredicted RBP8.52□□□□□ -1.05
R3HDM1-212ENST00000456040 FAM117AQ9C073 453 aa8.52□□□□□ -1.05
R3HDM1-212ENST00000456040 TUSC1Q2TAM9 212 aa8.51□□□□□ -1.05
R3HDM1-212ENST00000456040 GALNT6Q8NCL4 622 aa8.51□□□□□ -1.05
R3HDM1-212ENST00000456040 INSM2Q96T92 566 aaPredicted RBP8.51□□□□□ -1.05
R3HDM1-212ENST00000456040 CTSOP43234 321 aaPredicted RBP8.5□□□□□ -1.05
R3HDM1-212ENST00000456040 LYPD4Q6UWN0 246 aa8.5□□□□□ -1.05
R3HDM1-212ENST00000456040 LIMD1Q9UGP4 676 aa8.5□□□□□ -1.05
R3HDM1-212ENST00000456040 CELA2BP08218 269 aaPredicted RBP8.49□□□□□ -1.05
R3HDM1-212ENST00000456040 CLK2P49760 499 aaKnown RBP8.49□□□□□ -1.05
R3HDM1-212ENST00000456040 PDXDC2PQ6P474 469 aa8.49□□□□□ -1.05
R3HDM1-212ENST00000456040 NEDD1Q8NHV4 660 aa8.49□□□□□ -1.05
R3HDM1-212ENST00000456040 AGBL1Q96MI9 1066 aa8.49□□□□□ -1.05
R3HDM1-212ENST00000456040 POLR3EQ9NVU0 708 aa8.49□□□□□ -1.05
R3HDM1-212ENST00000456040 PRKCSHP14314 528 aaPredicted RBP8.48□□□□□ -1.05
R3HDM1-212ENST00000456040 BRPF1P55201 1214 aaPredicted RBP8.48□□□□□ -1.05
R3HDM1-212ENST00000456040 SKIV2LQ15477 1246 aaKnown RBP8.48□□□□□ -1.05
R3HDM1-212ENST00000456040 LILRB3O75022 631 aa8.47□□□□□ -1.05
R3HDM1-212ENST00000456040 ADAM23O75077 832 aa8.47□□□□□ -1.05
R3HDM1-212ENST00000456040 QPCTQ16769 361 aa8.47□□□□□ -1.05
R3HDM1-212ENST00000456040 SH3D19Q5HYK7 790 aa8.47□□□□□ -1.05
R3HDM1-212ENST00000456040 GMCL1Q96IK5 515 aa8.47□□□□□ -1.05
R3HDM1-212ENST00000456040 ZNF395Q9H8N7 513 aaPredicted RBP8.47□□□□□ -1.05
R3HDM1-212ENST00000456040 PLA2G4EQ3MJ16 856 aa8.46□□□□□ -1.06
R3HDM1-212ENST00000456040 XP32Q5T750 250 aa8.46□□□□□ -1.06
R3HDM1-212ENST00000456040 LYSMD3Q7Z3D4 306 aa8.46□□□□□ -1.06
R3HDM1-212ENST00000456040 RNF217Q8TC41 542 aa8.46□□□□□ -1.06
R3HDM1-212ENST00000456040 ATP1B4Q9UN42 357 aaPredicted RBP8.46□□□□□ -1.06
R3HDM1-212ENST00000456040 PTK2Q05397 1052 aa8.45□□□□□ -1.06
R3HDM1-212ENST00000456040 NBPF20Q3BBV1 942 aa8.45□□□□□ -1.06
R3HDM1-212ENST00000456040 DCAF5Q96JK2 942 aa8.45□□□□□ -1.06
R3HDM1-212ENST00000456040 SPOCK3Q9BQ16 436 aa8.45□□□□□ -1.06
R3HDM1-212ENST00000456040 MBIPQ9NS73 344 aa8.45□□□□□ -1.06
R3HDM1-212ENST00000456040 PNMA1Q8ND90 353 aa8.44□□□□□ -1.06
R3HDM1-212ENST00000456040 FKBPLQ9UIM3 349 aa8.44□□□□□ -1.06
R3HDM1-212ENST00000456040 NSFL1CQ9UNZ2 370 aaKnown RBP8.44□□□□□ -1.06
R3HDM1-212ENST00000456040 INTS6LQ5JSJ4 861 aaKnown RBP8.43□□□□□ -1.06
R3HDM1-212ENST00000456040 IL27Q8NEV9 243 aa8.43□□□□□ -1.06
R3HDM1-212ENST00000456040 CNTNAP5Q8WYK1 1306 aa8.43□□□□□ -1.06
R3HDM1-212ENST00000456040 ZC3H4Q9UPT8 1303 aaKnown RBP8.43□□□□□ -1.06
R3HDM1-212ENST00000456040 SENP3-EIF4A1A0A087X0R7 540 aa8.42□□□□□ -1.06
R3HDM1-212ENST00000456040 ADH1AP07327 375 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms