RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 TRIM35Q9UPQ4 493 aa16.12■□□□□ 0.17
LINC00473-202ENST00000455853 A0A1W2PP64 1363 aa16.11■□□□□ 0.17
LINC00473-202ENST00000455853 UBAP1LF5GYI3 381 aa16.11■□□□□ 0.17
LINC00473-202ENST00000455853 TMEM132EQ6IEE7 984 aa16.11■□□□□ 0.17
LINC00473-202ENST00000455853 CPS1P31327 1500 aa16.11■□□□□ 0.17
LINC00473-202ENST00000455853 XRCC6P12956 609 aaKnown RBP eCLIP16.1■□□□□ 0.17
LINC00473-202ENST00000455853 PNPLA6Q8IY17 1366 aa16.1■□□□□ 0.17
LINC00473-202ENST00000455853 CALD1Q05682 793 aaKnown RBP16.1■□□□□ 0.17
LINC00473-202ENST00000455853 GCC1Q96CN9 775 aa16.1■□□□□ 0.17
LINC00473-202ENST00000455853 GBP4Q96PP9 640 aa16.1■□□□□ 0.17
LINC00473-202ENST00000455853 SLC26A8Q96RN1 970 aa16.1■□□□□ 0.17
LINC00473-202ENST00000455853 DDIT3P35638 169 aa16.09■□□□□ 0.17
LINC00473-202ENST00000455853 BMP2KLQ5H9B9 411 aa16.09■□□□□ 0.17
LINC00473-202ENST00000455853 TSR2Q969E8 191 aaKnown RBP16.09■□□□□ 0.17
LINC00473-202ENST00000455853 NOB1Q9ULX3 412 aaKnown RBP16.09■□□□□ 0.17
LINC00473-202ENST00000455853 CLCN1P35523 988 aa16.08■□□□□ 0.17
LINC00473-202ENST00000455853 NUTM2DQ5VT03 806 aaPredicted RBP16.08■□□□□ 0.17
LINC00473-202ENST00000455853 ARHGAP45Q92619 1136 aa16.08■□□□□ 0.17
LINC00473-202ENST00000455853 ZNF692Q9BU19 519 aaPredicted RBP16.08■□□□□ 0.17
LINC00473-202ENST00000455853 TMEM131LA2VDJ0 1609 aa16.08■□□□□ 0.16
LINC00473-202ENST00000455853 RIMS2Q9UQ26 1411 aa16.08■□□□□ 0.16
LINC00473-202ENST00000455853 U2SURPO15042 1029 aaKnown RBP16.08■□□□□ 0.16
LINC00473-202ENST00000455853 TMEM57Q8N5G2 664 aa16.08■□□□□ 0.16
LINC00473-202ENST00000455853 UBE2Q2Q8WVN8 375 aa16.08■□□□□ 0.16
LINC00473-202ENST00000455853 PIK3R4Q99570 1358 aa16.07■□□□□ 0.16
LINC00473-202ENST00000455853 DIAPH1O60610 1272 aaKnown RBP16.07■□□□□ 0.16
LINC00473-202ENST00000455853 FCHSD2O94868 740 aa16.07■□□□□ 0.16
LINC00473-202ENST00000455853 RRAGDQ9NQL2 400 aaPredicted RBP16.07■□□□□ 0.16
LINC00473-202ENST00000455853 RIPK4P57078 832 aa16.06■□□□□ 0.16
LINC00473-202ENST00000455853 CHD1LQ86WJ1 897 aa16.06■□□□□ 0.16
LINC00473-202ENST00000455853 STRCP1A6NGW2 1772 aa16.06■□□□□ 0.16
LINC00473-202ENST00000455853 LRRC7Q96NW7 1537 aa16.06■□□□□ 0.16
LINC00473-202ENST00000455853 HDGFL2Q7Z4V5 671 aaPredicted RBP16.05■□□□□ 0.16
LINC00473-202ENST00000455853 CABP2Q9NPB3 220 aa16.05■□□□□ 0.16
LINC00473-202ENST00000455853 PTCH1Q13635 1447 aa16.05■□□□□ 0.16
LINC00473-202ENST00000455853 FAM135BQ49AJ0 1406 aa16.04■□□□□ 0.16
LINC00473-202ENST00000455853 HSP90AB1P08238 724 aaKnown RBP16.03■□□□□ 0.16
LINC00473-202ENST00000455853 SRPK2P78362 688 aaKnown RBP16.03■□□□□ 0.16
LINC00473-202ENST00000455853 KIF24Q5T7B8 1368 aa16.03■□□□□ 0.16
LINC00473-202ENST00000455853 GRPEL1Q9HAV7 217 aa16.03■□□□□ 0.16
LINC00473-202ENST00000455853 CD163L1Q9NR16 1453 aa16.03■□□□□ 0.16
LINC00473-202ENST00000455853 PLEKHG1Q9ULL1 1385 aa16.03■□□□□ 0.16
LINC00473-202ENST00000455853 HDGFP51858 240 aaKnown RBP16.03■□□□□ 0.16
LINC00473-202ENST00000455853 PIP4K2BP78356 416 aa16.03■□□□□ 0.16
LINC00473-202ENST00000455853 RAB3GAP1Q15042 981 aa16.03■□□□□ 0.16
LINC00473-202ENST00000455853 FYB1O15117 783 aa16.02■□□□□ 0.16
LINC00473-202ENST00000455853 SPRYD3Q8NCJ5 442 aa16.02■□□□□ 0.16
LINC00473-202ENST00000455853 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.02■□□□□ 0.16
LINC00473-202ENST00000455853 MYO5BQ9ULV0 1848 aa16.02■□□□□ 0.15
LINC00473-202ENST00000455853 TOM1O60784 492 aa16.01■□□□□ 0.15
LINC00473-202ENST00000455853 KCNA6P17658 529 aa16.01■□□□□ 0.15
LINC00473-202ENST00000455853 ATP7BP35670 1465 aa16.01■□□□□ 0.15
LINC00473-202ENST00000455853 RBM33Q96EV2 1170 aaKnown RBP16.01■□□□□ 0.15
LINC00473-202ENST00000455853 GGNBP2Q9H3C7 697 aa16.01■□□□□ 0.15
LINC00473-202ENST00000455853 YTHDC2Q9H6S0 1430 aaKnown RBP16■□□□□ 0.15
LINC00473-202ENST00000455853 GOLGA6L22H0YM25 854 aa16■□□□□ 0.15
LINC00473-202ENST00000455853 CLEC17AQ6ZS10 378 aa16■□□□□ 0.15
LINC00473-202ENST00000455853 DLC1Q96QB1 1528 aa16■□□□□ 0.15
LINC00473-202ENST00000455853 IBTKQ9P2D0 1353 aaPredicted RBP15.99■□□□□ 0.15
LINC00473-202ENST00000455853 GNAI1P63096 354 aa15.99■□□□□ 0.15
LINC00473-202ENST00000455853 GZF1Q9H116 711 aaPredicted RBP15.99■□□□□ 0.15
LINC00473-202ENST00000455853 K7ELQ4 463 aaPredicted RBP15.98■□□□□ 0.15
LINC00473-202ENST00000455853 LMOD3Q0VAK6 560 aa15.98■□□□□ 0.15
LINC00473-202ENST00000455853 TNPO1Q92973 898 aaKnown RBP15.98■□□□□ 0.15
LINC00473-202ENST00000455853 LNPKQ9C0E8 428 aa15.98■□□□□ 0.15
LINC00473-202ENST00000455853 ALKQ9UM73 1620 aa15.98■□□□□ 0.15
LINC00473-202ENST00000455853 ZBTB7BO15156 539 aaPredicted RBP15.98■□□□□ 0.15
LINC00473-202ENST00000455853 NFE2L2Q16236 605 aa15.98■□□□□ 0.15
LINC00473-202ENST00000455853 IFT57Q9NWB7 429 aa15.98■□□□□ 0.15
LINC00473-202ENST00000455853 ADAMTS13Q76LX8 1427 aa15.97■□□□□ 0.15
LINC00473-202ENST00000455853 MRPL50Q8N5N7 158 aaKnown RBP15.97■□□□□ 0.15
LINC00473-202ENST00000455853 TBX22Q9Y458 520 aa15.97■□□□□ 0.15
LINC00473-202ENST00000455853 MAP2P11137 1827 aaKnown RBP15.97■□□□□ 0.15
LINC00473-202ENST00000455853 TMEM94Q12767 1356 aa15.97■□□□□ 0.15
LINC00473-202ENST00000455853 ABCC4O15439 1325 aa15.97■□□□□ 0.15
LINC00473-202ENST00000455853 CDC45O75419 566 aa15.96■□□□□ 0.15
LINC00473-202ENST00000455853 PROSER2Q86WR7 435 aaPredicted RBP15.96■□□□□ 0.15
LINC00473-202ENST00000455853 API5Q9BZZ5 524 aaKnown RBP15.96■□□□□ 0.15
LINC00473-202ENST00000455853 HSP90AA1P07900 732 aaKnown RBP15.96■□□□□ 0.14
LINC00473-202ENST00000455853 TRIM44Q96DX7 344 aaPredicted RBP15.96■□□□□ 0.14
LINC00473-202ENST00000455853 HAP1P54257 671 aaPredicted RBP15.95■□□□□ 0.14
LINC00473-202ENST00000455853 ANKRD45Q5TZF3 282 aa15.95■□□□□ 0.14
LINC00473-202ENST00000455853 PANK2Q9BZ23 570 aa15.95■□□□□ 0.14
LINC00473-202ENST00000455853 CDK12Q9NYV4 1490 aaPredicted RBP15.94■□□□□ 0.14
LINC00473-202ENST00000455853 ESPNB1AK53 854 aa15.94■□□□□ 0.14
LINC00473-202ENST00000455853 HSPA1LP34931 641 aa15.94■□□□□ 0.14
LINC00473-202ENST00000455853 GLIPR1L2Q4G1C9 344 aa15.94■□□□□ 0.14
LINC00473-202ENST00000455853 VAMP4O75379 141 aa15.94■□□□□ 0.14
LINC00473-202ENST00000455853 KIF2CQ99661 725 aa15.94■□□□□ 0.14
LINC00473-202ENST00000455853 PRKAR2BP31323 418 aa15.93■□□□□ 0.14
LINC00473-202ENST00000455853 RABEP1Q15276 862 aa15.93■□□□□ 0.14
LINC00473-202ENST00000455853 TBC1D9Q6ZT07 1266 aa15.93■□□□□ 0.14
LINC00473-202ENST00000455853 PRAM1Q96QH2 718 aa15.93■□□□□ 0.14
LINC00473-202ENST00000455853 NWD1Q149M9 1564 aa15.93■□□□□ 0.14
LINC00473-202ENST00000455853 DLG5Q8TDM6 1919 aa15.92■□□□□ 0.14
LINC00473-202ENST00000455853 ZNF853P0CG23 659 aa15.92■□□□□ 0.14
LINC00473-202ENST00000455853 CCDC173Q0VFZ6 552 aa15.92■□□□□ 0.14
LINC00473-202ENST00000455853 NAP1L5Q96NT1 182 aaPredicted RBP15.92■□□□□ 0.14
LINC00473-202ENST00000455853 MINK1Q8N4C8 1332 aaPredicted RBP15.92■□□□□ 0.14
LINC00473-202ENST00000455853 NUCB2P80303 420 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms