RNA–Protein interactions for RNA: ENST00000455279.6

CCHCR1-209, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 676 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-209ENST00000455279 TERF2IPQ9NYB0 399 aa28.6■■■□□ 2.17
CCHCR1-209ENST00000455279 OVOS2A0A0J9YW53 1432 aa28.6■■■□□ 2.17
CCHCR1-209ENST00000455279 OVOS2Q6IE36 1432 aa28.6■■■□□ 2.17
CCHCR1-209ENST00000455279 TNS1Q9HBL0 1735 aaKnown RBP28.58■■■□□ 2.17
CCHCR1-209ENST00000455279 TIMELESSQ9UNS1 1208 aa28.58■■■□□ 2.17
CCHCR1-209ENST00000455279 LTN1O94822 1766 aa28.57■■■□□ 2.16
CCHCR1-209ENST00000455279 FBLN1P23142 703 aa28.57■■■□□ 2.16
CCHCR1-209ENST00000455279 TOM1L2Q6ZVM7 507 aa28.57■■■□□ 2.16
CCHCR1-209ENST00000455279 WDR17Q8IZU2 1322 aa28.57■■■□□ 2.16
CCHCR1-209ENST00000455279 PARP4Q9UKK3 1724 aaKnown RBP28.57■■■□□ 2.16
CCHCR1-209ENST00000455279 TMF1P82094 1093 aa28.56■■■□□ 2.16
CCHCR1-209ENST00000455279 WNK3Q9BYP7 1800 aa28.56■■■□□ 2.16
CCHCR1-209ENST00000455279 RGPD1P0DJD0 1748 aa28.55■■■□□ 2.16
CCHCR1-209ENST00000455279 LRRC37A3O60309 1634 aa28.54■■■□□ 2.16
CCHCR1-209ENST00000455279 SF3B2Q13435 895 aaKnown RBP28.54■■■□□ 2.16
CCHCR1-209ENST00000455279 THRAP3Q9Y2W1 955 aaKnown RBP28.54■■■□□ 2.16
CCHCR1-209ENST00000455279 ANKRD36BQ8N2N9 1353 aa28.53■■■□□ 2.16
CCHCR1-209ENST00000455279 NINLQ9Y2I6 1382 aa28.53■■■□□ 2.16
CCHCR1-209ENST00000455279 TRIM37O94972 964 aa28.53■■■□□ 2.16
CCHCR1-209ENST00000455279 EN1Q05925 392 aaPredicted RBP28.53■■■□□ 2.16
CCHCR1-209ENST00000455279 MYOM1P52179 1685 aa28.53■■■□□ 2.16
CCHCR1-209ENST00000455279 CSB-PGBD3P0DP91 1061 aa28.5■■■□□ 2.15
CCHCR1-209ENST00000455279 PDE3BQ13370 1112 aa28.5■■■□□ 2.15
CCHCR1-209ENST00000455279 PEAK1Q9H792 1746 aa28.49■■■□□ 2.15
CCHCR1-209ENST00000455279 FAM196AQ6ZSG2 479 aa28.48■■■□□ 2.15
CCHCR1-209ENST00000455279 DISP2A7MBM2 1401 aa28.48■■■□□ 2.15
CCHCR1-209ENST00000455279 BAG6P46379 1132 aa28.47■■■□□ 2.15
CCHCR1-209ENST00000455279 ABCC6O95255 1503 aa28.47■■■□□ 2.15
CCHCR1-209ENST00000455279 CARD10Q9BWT7 1032 aa28.46■■■□□ 2.15
CCHCR1-209ENST00000455279 ERBB3P21860 1342 aa28.45■■■□□ 2.15
CCHCR1-209ENST00000455279 EZH2Q15910 746 aaKnown RBP28.45■■■□□ 2.14
CCHCR1-209ENST00000455279 GGNBP2Q9H3C7 697 aa28.45■■■□□ 2.14
CCHCR1-209ENST00000455279 CARD14Q9BXL6 1004 aa28.44■■■□□ 2.14
CCHCR1-209ENST00000455279 FYB1O15117 783 aa28.43■■■□□ 2.14
CCHCR1-209ENST00000455279 SLC24A1O60721 1099 aa28.43■■■□□ 2.14
CCHCR1-209ENST00000455279 PTF1AQ7RTS3 328 aa28.43■■■□□ 2.14
CCHCR1-209ENST00000455279 HSPA5P11021 654 aaKnown RBP28.42■■■□□ 2.14
CCHCR1-209ENST00000455279 DDB1Q16531 1140 aa28.42■■■□□ 2.14
CCHCR1-209ENST00000455279 ANKRD24Q8TF21 1146 aa28.42■■■□□ 2.14
CCHCR1-209ENST00000455279 COG3Q96JB2 828 aa28.42■■■□□ 2.14
CCHCR1-209ENST00000455279 MARCH10Q8NA82 808 aaPredicted RBP28.41■■■□□ 2.14
CCHCR1-209ENST00000455279 MAP3K19Q56UN5 1328 aa28.41■■■□□ 2.14
CCHCR1-209ENST00000455279 CAMKK2Q96RR4 588 aa28.4■■■□□ 2.14
CCHCR1-209ENST00000455279 SBF2Q86WG5 1849 aa28.4■■■□□ 2.14
CCHCR1-209ENST00000455279 KIF20BQ96Q89 1820 aa28.39■■■□□ 2.14
CCHCR1-209ENST00000455279 PSDA5PKW4 1024 aaPredicted RBP28.39■■■□□ 2.14
CCHCR1-209ENST00000455279 LTV1Q96GA3 475 aaPredicted RBP28.39■■■□□ 2.14
CCHCR1-209ENST00000455279 NLRP2Q9NX02 1062 aa28.39■■■□□ 2.14
CCHCR1-209ENST00000455279 APBA3O96018 575 aa28.38■■■□□ 2.13
CCHCR1-209ENST00000455279 RRS1Q15050 365 aaKnown RBP28.38■■■□□ 2.13
CCHCR1-209ENST00000455279 RGPD2P0DJD1 1756 aa28.37■■■□□ 2.13
CCHCR1-209ENST00000455279 IP6K1Q92551 441 aa28.37■■■□□ 2.13
CCHCR1-209ENST00000455279 POLR3GLQ9BT43 218 aa28.37■■■□□ 2.13
CCHCR1-209ENST00000455279 CCDC7Q96M83 1385 aa28.37■■■□□ 2.13
CCHCR1-209ENST00000455279 OVOS2A0A0G2JMS6 1433 aa28.36■■■□□ 2.13
CCHCR1-209ENST00000455279 NSD3Q9BZ95 1437 aa28.36■■■□□ 2.13
CCHCR1-209ENST00000455279 HOXC9P31274 260 aa28.35■■■□□ 2.13
CCHCR1-209ENST00000455279 CDCA8Q53HL2 280 aa28.35■■■□□ 2.13
CCHCR1-209ENST00000455279 RREB1Q92766 1687 aa28.32■■■□□ 2.12
CCHCR1-209ENST00000455279 C11orf95C9JLR9 678 aaPredicted RBP28.32■■■□□ 2.12
CCHCR1-209ENST00000455279 EIF4G2P78344 907 aaKnown RBP eCLIP28.32■■■□□ 2.12
CCHCR1-209ENST00000455279 TNS2Q63HR2 1409 aa28.31■■■□□ 2.12
CCHCR1-209ENST00000455279 NUP188Q5SRE5 1749 aa28.3■■■□□ 2.12
CCHCR1-209ENST00000455279 CDCA7Q9BWT1 371 aaPredicted RBP28.3■■■□□ 2.12
CCHCR1-209ENST00000455279 FAM208AQ9UK61 1670 aaKnown RBP28.29■■■□□ 2.12
CCHCR1-209ENST00000455279 AMPHP49418 695 aa28.29■■■□□ 2.12
CCHCR1-209ENST00000455279 SRCAPQ6ZRS2 3230 aa28.29■■■□□ 2.12
CCHCR1-209ENST00000455279 EXOC5O00471 708 aa28.28■■■□□ 2.12
CCHCR1-209ENST00000455279 IL2RBP14784 551 aa28.27■■■□□ 2.12
CCHCR1-209ENST00000455279 R3HDM1Q15032 1099 aaKnown RBP28.27■■■□□ 2.12
CCHCR1-209ENST00000455279 KCNQ2O43526 872 aa28.24■■■□□ 2.11
CCHCR1-209ENST00000455279 EMILIN1Q9Y6C2 1016 aa28.24■■■□□ 2.11
CCHCR1-209ENST00000455279 USHBP1Q8N6Y0 703 aa28.23■■■□□ 2.11
CCHCR1-209ENST00000455279 BCL9O00512 1426 aa28.23■■■□□ 2.11
CCHCR1-209ENST00000455279 HSP90AB2PQ58FF8 381 aa28.22■■■□□ 2.11
CCHCR1-209ENST00000455279 ACSBG1Q96GR2 724 aa28.22■■■□□ 2.11
CCHCR1-209ENST00000455279 RTL1A6NKG5 1358 aa28.22■■■□□ 2.11
CCHCR1-209ENST00000455279 NBPF6Q5VWK0 638 aa28.21■■■□□ 2.11
CCHCR1-209ENST00000455279 NBPF4Q96M43 638 aa28.21■■■□□ 2.11
CCHCR1-209ENST00000455279 BCL11BQ9C0K0 894 aaPredicted RBP28.21■■■□□ 2.11
CCHCR1-209ENST00000455279 MEGF6O75095 1541 aa28.21■■■□□ 2.11
CCHCR1-209ENST00000455279 SHANK3Q9BYB0 1731 aa28.19■■■□□ 2.1
CCHCR1-209ENST00000455279 PROM2Q8N271 834 aa28.19■■■□□ 2.1
CCHCR1-209ENST00000455279 PARD3Q8TEW0 1356 aa28.19■■■□□ 2.1
CCHCR1-209ENST00000455279 PANK3Q9H999 370 aa28.17■■■□□ 2.1
CCHCR1-209ENST00000455279 NHSQ6T4R5 1651 aa28.16■■■□□ 2.1
CCHCR1-209ENST00000455279 RGPD3A6NKT7 1758 aaPredicted RBP28.15■■■□□ 2.1
CCHCR1-209ENST00000455279 RGPD4Q7Z3J3 1758 aa28.15■■■□□ 2.1
CCHCR1-209ENST00000455279 ANO8Q9HCE9 1232 aaPredicted RBP28.15■■■□□ 2.1
CCHCR1-209ENST00000455279 MAP2P11137 1827 aaKnown RBP28.14■■■□□ 2.1
CCHCR1-209ENST00000455279 DDX54Q8TDD1 881 aaKnown RBP28.14■■■□□ 2.1
CCHCR1-209ENST00000455279 CGNL1Q0VF96 1302 aa28.14■■■□□ 2.09
CCHCR1-209ENST00000455279 INSRP06213 1382 aa28.13■■■□□ 2.09
CCHCR1-209ENST00000455279 FLT4P35916 1363 aa28.13■■■□□ 2.09
CCHCR1-209ENST00000455279 ANKRD26Q9UPS8 1709 aa28.13■■■□□ 2.09
CCHCR1-209ENST00000455279 PLSCR1O15162 318 aa28.13■■■□□ 2.09
CCHCR1-209ENST00000455279 KAT6BQ8WYB5 2073 aa28.13■■■□□ 2.09
CCHCR1-209ENST00000455279 LRP5O75197 1615 aa28.13■■■□□ 2.09
CCHCR1-209ENST00000455279 TNNT2P45379 298 aaPredicted RBP28.11■■■□□ 2.09
CCHCR1-209ENST00000455279 PPM1GO15355 546 aaPredicted RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms