RNA–Protein interactions for RNA: ENST00000455251.1

CLCP1-201, Transcript of Charcot-Leyden crystal protein pseudogene 1, humanhuman

BASIC

Gene CLCP1, Length 388 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCP1-201ENST00000455251 CARD14Q9BXL6 1004 aa15.24■□□□□ 0.03
CLCP1-201ENST00000455251 THSD7AQ9UPZ6 1657 aa15.24■□□□□ 0.03
CLCP1-201ENST00000455251 ARHGEF25Q86VW2 580 aa15.23■□□□□ 0.03
CLCP1-201ENST00000455251 COG3Q96JB2 828 aa15.23■□□□□ 0.03
CLCP1-201ENST00000455251 GGNBP2Q9H3C7 697 aa15.22■□□□□ 0.03
CLCP1-201ENST00000455251 PARP4Q9UKK3 1724 aaKnown RBP15.22■□□□□ 0.03
CLCP1-201ENST00000455251 KIF7Q2M1P5 1343 aa15.21■□□□□ 0.03
CLCP1-201ENST00000455251 SPATA31A5Q5VU36 1347 aa15.21■□□□□ 0.03
CLCP1-201ENST00000455251 SPATA31A7Q8IWB4 1347 aa15.21■□□□□ 0.03
CLCP1-201ENST00000455251 FYB1O15117 783 aa15.21■□□□□ 0.03
CLCP1-201ENST00000455251 PEAK1Q9H792 1746 aa15.2■□□□□ 0.02
CLCP1-201ENST00000455251 A0A0G2JS52 829 aa15.2■□□□□ 0.02
CLCP1-201ENST00000455251 MYT1Q01538 1121 aa15.2■□□□□ 0.02
CLCP1-201ENST00000455251 LARP1Q6PKG0 1096 aaKnown RBP15.2■□□□□ 0.02
CLCP1-201ENST00000455251 USP35Q9P2H5 1018 aa15.2■□□□□ 0.02
CLCP1-201ENST00000455251 AXIN2Q9Y2T1 843 aa15.2■□□□□ 0.02
CLCP1-201ENST00000455251 SPATA31A1Q5TZJ5 1347 aa15.19■□□□□ 0.02
CLCP1-201ENST00000455251 FAM98CQ17RN3 349 aaKnown RBP15.19■□□□□ 0.02
CLCP1-201ENST00000455251 PANK3Q9H999 370 aa15.19■□□□□ 0.02
CLCP1-201ENST00000455251 CRB1P82279 1406 aa15.18■□□□□ 0.02
CLCP1-201ENST00000455251 CGNL1Q0VF96 1302 aa15.17■□□□□ 0.02
CLCP1-201ENST00000455251 LRRC37A3O60309 1634 aa15.17■□□□□ 0.02
CLCP1-201ENST00000455251 CCDC7Q96M83 1385 aa15.17■□□□□ 0.02
CLCP1-201ENST00000455251 SEPT12Q8IYM1 358 aa15.17■□□□□ 0.02
CLCP1-201ENST00000455251 ONECUT3O60422 494 aaPredicted RBP15.16■□□□□ 0.02
CLCP1-201ENST00000455251 FBLN1P23142 703 aa15.16■□□□□ 0.02
CLCP1-201ENST00000455251 WDR17Q8IZU2 1322 aa15.16■□□□□ 0.02
CLCP1-201ENST00000455251 SBF2Q86WG5 1849 aa15.15■□□□□ 0.02
CLCP1-201ENST00000455251 CSB-PGBD3P0DP91 1061 aa15.15■□□□□ 0.02
CLCP1-201ENST00000455251 TOM1L2Q6ZVM7 507 aa15.15■□□□□ 0.02
CLCP1-201ENST00000455251 BLMP54132 1417 aaPredicted RBP15.15■□□□□ 0.02
CLCP1-201ENST00000455251 EP400Q96L91 3159 aa15.15■□□□□ 0.02
CLCP1-201ENST00000455251 MAP3K19Q56UN5 1328 aa15.15■□□□□ 0.02
CLCP1-201ENST00000455251 WASHC2AQ641Q2 1341 aa15.15■□□□□ 0.02
CLCP1-201ENST00000455251 RGPD1P0DJD0 1748 aa15.14■□□□□ 0.01
CLCP1-201ENST00000455251 AMPHP49418 695 aa15.13■□□□□ 0.01
CLCP1-201ENST00000455251 RRS1Q15050 365 aaKnown RBP15.13■□□□□ 0.01
CLCP1-201ENST00000455251 TCP11L2Q8N4U5 519 aa15.13■□□□□ 0.01
CLCP1-201ENST00000455251 BARGINQ6ZT62 677 aa15.12■□□□□ 0.01
CLCP1-201ENST00000455251 IP6K1Q92551 441 aa15.12■□□□□ 0.01
CLCP1-201ENST00000455251 THRAP3Q9Y2W1 955 aaKnown RBP15.12■□□□□ 0.01
CLCP1-201ENST00000455251 ERBB3P21860 1342 aa15.12■□□□□ 0.01
CLCP1-201ENST00000455251 KAT6BQ8WYB5 2073 aa15.12■□□□□ 0.01
CLCP1-201ENST00000455251 TNS1Q9HBL0 1735 aaKnown RBP15.12■□□□□ 0.01
CLCP1-201ENST00000455251 RTL1A6NKG5 1358 aa15.11■□□□□ 0.01
CLCP1-201ENST00000455251 HOXC9P31274 260 aa15.11■□□□□ 0.01
CLCP1-201ENST00000455251 KRT27Q7Z3Y8 459 aa15.11■□□□□ 0.01
CLCP1-201ENST00000455251 ANKRD24Q8TF21 1146 aa15.11■□□□□ 0.01
CLCP1-201ENST00000455251 UPF1Q92900 1129 aaKnown RBP eCLIP15.11■□□□□ 0.01
CLCP1-201ENST00000455251 LTV1Q96GA3 475 aaPredicted RBP15.11■□□□□ 0.01
CLCP1-201ENST00000455251 KNSTRNQ9Y448 316 aa15.11■□□□□ 0.01
CLCP1-201ENST00000455251 NSD2O96028 1365 aa15.11■□□□□ 0.01
CLCP1-201ENST00000455251 SHANK3Q9BYB0 1731 aa15.09■□□□□ 0.01
CLCP1-201ENST00000455251 TNNT2P45379 298 aaPredicted RBP15.09■□□□□ 0.01
CLCP1-201ENST00000455251 CARD10Q9BWT7 1032 aa15.09■□□□□ 0.01
CLCP1-201ENST00000455251 NLRP2Q9NX02 1062 aa15.09■□□□□ 0.01
CLCP1-201ENST00000455251 FLT4P35916 1363 aa15.09■□□□□ 0.01
CLCP1-201ENST00000455251 PPM1GO15355 546 aaPredicted RBP15.07■□□□□ 0
CLCP1-201ENST00000455251 ZEB1P37275 1124 aaPredicted RBP15.07■□□□□ 0
CLCP1-201ENST00000455251 FAM182BQ5T319 152 aa15.07■□□□□ 0
CLCP1-201ENST00000455251 EMILIN1Q9Y6C2 1016 aa15.07■□□□□ 0
CLCP1-201ENST00000455251 KIF24Q5T7B8 1368 aa15.07■□□□□ 0
CLCP1-201ENST00000455251 SMG6Q86US8 1419 aaKnown RBP15.07■□□□□ 0
CLCP1-201ENST00000455251 MORC1Q86VD1 984 aa15.06■□□□□ 0
CLCP1-201ENST00000455251 DISP2A7MBM2 1401 aa15.06■□□□□ 0
CLCP1-201ENST00000455251 PDE3BQ13370 1112 aa15.05■□□□□ -0
CLCP1-201ENST00000455251 HSP90AB2PQ58FF8 381 aa15.05■□□□□ -0
CLCP1-201ENST00000455251 AMER1Q5JTC6 1135 aaPredicted RBP15.05■□□□□ -0
CLCP1-201ENST00000455251 INSRP06213 1382 aa15.05■□□□□ -0
CLCP1-201ENST00000455251 PER1O15534 1290 aaPredicted RBP15.04■□□□□ -0
CLCP1-201ENST00000455251 DDB1Q16531 1140 aa15.04■□□□□ -0
CLCP1-201ENST00000455251 CDCA7Q9BWT1 371 aaPredicted RBP15.04■□□□□ -0
CLCP1-201ENST00000455251 CNGB1Q14028 1251 aaPredicted RBP15.03■□□□□ -0
CLCP1-201ENST00000455251 CC2D1BQ5T0F9 858 aaKnown RBP15.03■□□□□ -0
CLCP1-201ENST00000455251 POLKQ9UBT6 870 aa15.03■□□□□ -0
CLCP1-201ENST00000455251 VIRMAQ69YN4 1812 aaKnown RBP15.03■□□□□ -0
CLCP1-201ENST00000455251 TNS2Q63HR2 1409 aa15.02■□□□□ -0
CLCP1-201ENST00000455251 PKD1L3Q7Z443 1732 aa15.02□□□□□ -0.01
CLCP1-201ENST00000455251 DOT1LQ8TEK3 1739 aa15.02□□□□□ -0.01
CLCP1-201ENST00000455251 IL2RBP14784 551 aa15.01□□□□□ -0.01
CLCP1-201ENST00000455251 CCDC125Q86Z20 511 aa15.01□□□□□ -0.01
CLCP1-201ENST00000455251 OVOS2A0A0G2JMS6 1433 aa15□□□□□ -0.01
CLCP1-201ENST00000455251 NHSQ6T4R5 1651 aa15□□□□□ -0.01
CLCP1-201ENST00000455251 NBPF6Q5VWK0 638 aa15□□□□□ -0.01
CLCP1-201ENST00000455251 FAM196AQ6ZSG2 479 aa15□□□□□ -0.01
CLCP1-201ENST00000455251 USHBP1Q8N6Y0 703 aa15□□□□□ -0.01
CLCP1-201ENST00000455251 NBPF4Q96M43 638 aa15□□□□□ -0.01
CLCP1-201ENST00000455251 BTAF1O14981 1849 aa14.99□□□□□ -0.01
CLCP1-201ENST00000455251 MEGF6O75095 1541 aa14.99□□□□□ -0.01
CLCP1-201ENST00000455251 EXOC5O00471 708 aa14.99□□□□□ -0.01
CLCP1-201ENST00000455251 SF3B2Q13435 895 aaKnown RBP14.99□□□□□ -0.01
CLCP1-201ENST00000455251 ITGB4P16144 1822 aa14.99□□□□□ -0.01
CLCP1-201ENST00000455251 NPC1L1Q9UHC9 1359 aa14.98□□□□□ -0.01
CLCP1-201ENST00000455251 RGPD3A6NKT7 1758 aaPredicted RBP14.98□□□□□ -0.01
CLCP1-201ENST00000455251 RGPD4Q7Z3J3 1758 aa14.98□□□□□ -0.01
CLCP1-201ENST00000455251 MARCH10Q8NA82 808 aaPredicted RBP14.97□□□□□ -0.01
CLCP1-201ENST00000455251 RREB1Q92766 1687 aa14.97□□□□□ -0.01
CLCP1-201ENST00000455251 TRIM37O94972 964 aa14.96□□□□□ -0.01
CLCP1-201ENST00000455251 NCAPD2Q15021 1401 aa14.95□□□□□ -0.02
CLCP1-201ENST00000455251 EIF4A2Q14240 407 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms