RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 CHMP5Q9NZZ3 219 aa11.85□□□□□ -0.51
LINC01940-201ENST00000455228 U2AF1L5P0DN76 240 aaPredicted RBP11.84□□□□□ -0.51
LINC01940-201ENST00000455228 U2AF1Q01081 240 aaKnown RBP eCLIP11.84□□□□□ -0.51
LINC01940-201ENST00000455228 ZKSCAN8Q15776 578 aaPredicted RBP11.84□□□□□ -0.51
LINC01940-201ENST00000455228 MYCBPQ99417 103 aaPredicted RBP11.84□□□□□ -0.51
LINC01940-201ENST00000455228 ZMYM3Q14202 1370 aa11.84□□□□□ -0.51
LINC01940-201ENST00000455228 ADGRF5Q8IZF2 1346 aa11.84□□□□□ -0.51
LINC01940-201ENST00000455228 TRAPPC8Q9Y2L5 1435 aa11.84□□□□□ -0.51
LINC01940-201ENST00000455228 MTHFSP49914 203 aa11.84□□□□□ -0.51
LINC01940-201ENST00000455228 MAPK8IP2Q13387 824 aaPredicted RBP11.84□□□□□ -0.51
LINC01940-201ENST00000455228 HSCBQ8IWL3 235 aa11.84□□□□□ -0.51
LINC01940-201ENST00000455228 MAP2K1Q02750 393 aaPredicted RBP11.84□□□□□ -0.51
LINC01940-201ENST00000455228 MVPQ14764 893 aaKnown RBP11.84□□□□□ -0.51
LINC01940-201ENST00000455228 DZIP1LQ8IYY4 767 aaKnown RBP11.84□□□□□ -0.51
LINC01940-201ENST00000455228 PDLIM2Q96JY6 352 aa11.84□□□□□ -0.51
LINC01940-201ENST00000455228 SLC12A5Q9H2X9 1139 aa11.84□□□□□ -0.51
LINC01940-201ENST00000455228 TRAK1Q9UPV9 953 aa11.84□□□□□ -0.51
LINC01940-201ENST00000455228 TRPM2O94759 1503 aa11.83□□□□□ -0.51
LINC01940-201ENST00000455228 UHRF1BP1LA0JNW5 1464 aa11.83□□□□□ -0.52
LINC01940-201ENST00000455228 CT47A1Q5JQC4 288 aaPredicted RBP11.83□□□□□ -0.52
LINC01940-201ENST00000455228 PLCH2O75038 1416 aa11.83□□□□□ -0.52
LINC01940-201ENST00000455228 NSD3Q9BZ95 1437 aa11.83□□□□□ -0.52
LINC01940-201ENST00000455228 ERVK-7P63135 1459 aa11.83□□□□□ -0.52
LINC01940-201ENST00000455228 SLFN14P0C7P3 912 aa11.83□□□□□ -0.52
LINC01940-201ENST00000455228 CCDC172P0C7W6 258 aa11.83□□□□□ -0.52
LINC01940-201ENST00000455228 OTUD6BQ8N6M0 293 aa11.83□□□□□ -0.52
LINC01940-201ENST00000455228 KIF1CO43896 1103 aaKnown RBP11.83□□□□□ -0.52
LINC01940-201ENST00000455228 TRAK2O60296 914 aa11.83□□□□□ -0.52
LINC01940-201ENST00000455228 SMC4Q9NTJ3 1288 aa11.83□□□□□ -0.52
LINC01940-201ENST00000455228 MYOM1P52179 1685 aa11.83□□□□□ -0.52
LINC01940-201ENST00000455228 ITPRIPQ8IWB1 547 aa11.82□□□□□ -0.52
LINC01940-201ENST00000455228 SPHKAPQ2M3C7 1700 aa11.82□□□□□ -0.52
LINC01940-201ENST00000455228 HMGN5P82970 282 aaKnown RBP11.82□□□□□ -0.52
LINC01940-201ENST00000455228 LMOD3Q0VAK6 560 aa11.82□□□□□ -0.52
LINC01940-201ENST00000455228 NCOA3Q9Y6Q9 1424 aa11.82□□□□□ -0.52
LINC01940-201ENST00000455228 KCNJ4P48050 445 aa11.81□□□□□ -0.52
LINC01940-201ENST00000455228 BORCS6Q96GS4 357 aa11.81□□□□□ -0.52
LINC01940-201ENST00000455228 PRIMPOLQ96LW4 560 aa11.81□□□□□ -0.52
LINC01940-201ENST00000455228 DONSONQ9NYP3 566 aa11.81□□□□□ -0.52
LINC01940-201ENST00000455228 FEZ2Q9UHY8 353 aaPredicted RBP11.81□□□□□ -0.52
LINC01940-201ENST00000455228 PTPRTO14522 1441 aa11.81□□□□□ -0.52
LINC01940-201ENST00000455228 SEMA3FQ13275 785 aa11.81□□□□□ -0.52
LINC01940-201ENST00000455228 BANK1Q8NDB2 785 aa11.81□□□□□ -0.52
LINC01940-201ENST00000455228 CERS3Q8IU89 383 aa11.8□□□□□ -0.52
LINC01940-201ENST00000455228 CLTCL1P53675 1640 aa11.8□□□□□ -0.52
LINC01940-201ENST00000455228 C11orf91Q3C1V1 193 aa11.8□□□□□ -0.52
LINC01940-201ENST00000455228 ANKRD7Q92527 254 aa11.8□□□□□ -0.52
LINC01940-201ENST00000455228 DDX11L8A8MPP1 907 aa11.8□□□□□ -0.52
LINC01940-201ENST00000455228 TSR2Q969E8 191 aaKnown RBP11.8□□□□□ -0.52
LINC01940-201ENST00000455228 LOC102724159A0A0B4J2E5 919 aa11.79□□□□□ -0.52
LINC01940-201ENST00000455228 PWP2Q15269 919 aaKnown RBP11.79□□□□□ -0.52
LINC01940-201ENST00000455228 FAM53CQ9NYF3 392 aa11.79□□□□□ -0.52
LINC01940-201ENST00000455228 CALCOCO1Q9P1Z2 691 aa11.79□□□□□ -0.52
LINC01940-201ENST00000455228 U2SURPO15042 1029 aaKnown RBP11.79□□□□□ -0.52
LINC01940-201ENST00000455228 CCDC27Q2M243 656 aa11.79□□□□□ -0.52
LINC01940-201ENST00000455228 CEP152O94986 1710 aa11.79□□□□□ -0.52
LINC01940-201ENST00000455228 DDX19BQ9UMR2 479 aa11.79□□□□□ -0.52
LINC01940-201ENST00000455228 R3HCC1Q9Y3T6 440 aaKnown RBP11.78□□□□□ -0.52
LINC01940-201ENST00000455228 CCDC189A1A4V9 331 aa11.78□□□□□ -0.52
LINC01940-201ENST00000455228 SWT1Q5T5J6 900 aaKnown RBP11.78□□□□□ -0.52
LINC01940-201ENST00000455228 MED4Q9NPJ6 270 aa11.78□□□□□ -0.52
LINC01940-201ENST00000455228 PHF23Q9BUL5 403 aaPredicted RBP11.77□□□□□ -0.52
LINC01940-201ENST00000455228 RBM28Q9NW13 759 aaKnown RBP11.77□□□□□ -0.52
LINC01940-201ENST00000455228 TRHP20396 242 aaPredicted RBP11.77□□□□□ -0.53
LINC01940-201ENST00000455228 ANAPC15P60006 121 aa11.77□□□□□ -0.53
LINC01940-201ENST00000455228 EXOSC9Q06265 439 aaKnown RBP11.77□□□□□ -0.53
LINC01940-201ENST00000455228 OGFRQ9NZT2 677 aa11.77□□□□□ -0.53
LINC01940-201ENST00000455228 TMEM132EQ6IEE7 984 aa11.76□□□□□ -0.53
LINC01940-201ENST00000455228 GPATCH11Q8N954 259 aa11.76□□□□□ -0.53
LINC01940-201ENST00000455228 TRIM27P14373 513 aa11.76□□□□□ -0.53
LINC01940-201ENST00000455228 GUCY2CP25092 1073 aa11.76□□□□□ -0.53
LINC01940-201ENST00000455228 GSCP56915 257 aaPredicted RBP11.76□□□□□ -0.53
LINC01940-201ENST00000455228 ABCC1P33527 1531 aa11.76□□□□□ -0.53
LINC01940-201ENST00000455228 TRIM6-TRIM34B2RNG4 842 aa11.76□□□□□ -0.53
LINC01940-201ENST00000455228 CT47B1P0C2W7 299 aaPredicted RBP11.76□□□□□ -0.53
LINC01940-201ENST00000455228 TRIM34Q9BYJ4 488 aa11.76□□□□□ -0.53
LINC01940-201ENST00000455228 RTEL1-TNFRSF6BF6WH68 1400 aa11.75□□□□□ -0.53
LINC01940-201ENST00000455228 SYCP1Q15431 976 aa11.75□□□□□ -0.53
LINC01940-201ENST00000455228 ATF7IPQ6VMQ6 1270 aa11.75□□□□□ -0.53
LINC01940-201ENST00000455228 RNF217Q8TC41 542 aa11.75□□□□□ -0.53
LINC01940-201ENST00000455228 HDAC1Q13547 482 aaPredicted RBP11.75□□□□□ -0.53
LINC01940-201ENST00000455228 NBPF6Q5VWK0 638 aa11.75□□□□□ -0.53
LINC01940-201ENST00000455228 NBPF5PQ86XG9 351 aaPredicted RBP11.75□□□□□ -0.53
LINC01940-201ENST00000455228 NBPF4Q96M43 638 aa11.75□□□□□ -0.53
LINC01940-201ENST00000455228 GBP4Q96PP9 640 aa11.75□□□□□ -0.53
LINC01940-201ENST00000455228 SHROOM2Q13796 1616 aa11.75□□□□□ -0.53
LINC01940-201ENST00000455228 DDIT3P35638 169 aa11.74□□□□□ -0.53
LINC01940-201ENST00000455228 SSH1Q8WYL5 1049 aa11.74□□□□□ -0.53
LINC01940-201ENST00000455228 SBNO2Q9Y2G9 1366 aa11.74□□□□□ -0.53
LINC01940-201ENST00000455228 UGGT1Q9NYU2 1555 aa11.74□□□□□ -0.53
LINC01940-201ENST00000455228 IPO8O15397 1037 aaKnown RBP11.74□□□□□ -0.53
LINC01940-201ENST00000455228 CBX1P83916 185 aa11.74□□□□□ -0.53
LINC01940-201ENST00000455228 NOB1Q9ULX3 412 aaKnown RBP11.74□□□□□ -0.53
LINC01940-201ENST00000455228 KIAA1210Q9ULL0 1709 aa11.74□□□□□ -0.53
LINC01940-201ENST00000455228 CHMP4CQ96CF2 233 aa11.74□□□□□ -0.53
LINC01940-201ENST00000455228 LNPKQ9C0E8 428 aa11.74□□□□□ -0.53
LINC01940-201ENST00000455228 TERF2IPQ9NYB0 399 aa11.74□□□□□ -0.53
LINC01940-201ENST00000455228 MAP3K4Q9Y6R4 1608 aa11.74□□□□□ -0.53
LINC01940-201ENST00000455228 ITFG2Q969R8 447 aa11.73□□□□□ -0.53
LINC01940-201ENST00000455228 ZKSCAN5Q9Y2L8 839 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms