RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 THRAP3Q9Y2W1 955 aaKnown RBP28.51■■■□□ 2.15
TNRC18-208ENST00000455076 BLMP54132 1417 aaPredicted RBP28.49■■■□□ 2.15
TNRC18-208ENST00000455076 LTN1O94822 1766 aa28.49■■■□□ 2.15
TNRC18-208ENST00000455076 RGPD5Q99666 1765 aa28.48■■■□□ 2.15
TNRC18-208ENST00000455076 TCP11L2Q8N4U5 519 aa28.48■■■□□ 2.15
TNRC18-208ENST00000455076 AXIN2Q9Y2T1 843 aa28.48■■■□□ 2.15
TNRC18-208ENST00000455076 PARP4Q9UKK3 1724 aaKnown RBP28.48■■■□□ 2.15
TNRC18-208ENST00000455076 EIF4G2P78344 907 aaKnown RBP eCLIP28.47■■■□□ 2.15
TNRC18-208ENST00000455076 WDR17Q8IZU2 1322 aa28.46■■■□□ 2.15
TNRC18-208ENST00000455076 WNK3Q9BYP7 1800 aa28.46■■■□□ 2.15
TNRC18-208ENST00000455076 A0A0G2JS52 829 aa28.45■■■□□ 2.14
TNRC18-208ENST00000455076 MYT1Q01538 1121 aa28.45■■■□□ 2.14
TNRC18-208ENST00000455076 ZBTB7CA1YPR0 619 aa28.43■■■□□ 2.14
TNRC18-208ENST00000455076 SOX12O15370 315 aa28.43■■■□□ 2.14
TNRC18-208ENST00000455076 USP35Q9P2H5 1018 aa28.42■■■□□ 2.14
TNRC18-208ENST00000455076 KIF20BQ96Q89 1820 aa28.41■■■□□ 2.14
TNRC18-208ENST00000455076 HSPA5P11021 654 aaKnown RBP28.41■■■□□ 2.14
TNRC18-208ENST00000455076 COG3Q96JB2 828 aa28.39■■■□□ 2.14
TNRC18-208ENST00000455076 RGPD1P0DJD0 1748 aa28.38■■■□□ 2.13
TNRC18-208ENST00000455076 LRRC37A3O60309 1634 aa28.38■■■□□ 2.13
TNRC18-208ENST00000455076 ERBB3P21860 1342 aa28.38■■■□□ 2.13
TNRC18-208ENST00000455076 FYB1O15117 783 aa28.37■■■□□ 2.13
TNRC18-208ENST00000455076 TOM1L2Q6ZVM7 507 aa28.37■■■□□ 2.13
TNRC18-208ENST00000455076 CARD10Q9BWT7 1032 aa28.37■■■□□ 2.13
TNRC18-208ENST00000455076 DISP2A7MBM2 1401 aa28.36■■■□□ 2.13
TNRC18-208ENST00000455076 CCDC7Q96M83 1385 aa28.36■■■□□ 2.13
TNRC18-208ENST00000455076 NSD3Q9BZ95 1437 aa28.35■■■□□ 2.13
TNRC18-208ENST00000455076 CARD14Q9BXL6 1004 aa28.34■■■□□ 2.13
TNRC18-208ENST00000455076 FAM208AQ9UK61 1670 aaKnown RBP28.34■■■□□ 2.13
TNRC18-208ENST00000455076 TNS1Q9HBL0 1735 aaKnown RBP28.34■■■□□ 2.13
TNRC18-208ENST00000455076 CDCA7Q9BWT1 371 aaPredicted RBP28.33■■■□□ 2.13
TNRC18-208ENST00000455076 RTL1A6NKG5 1358 aa28.32■■■□□ 2.12
TNRC18-208ENST00000455076 PEAK1Q9H792 1746 aa28.32■■■□□ 2.12
TNRC18-208ENST00000455076 FAM196AQ6ZSG2 479 aa28.31■■■□□ 2.12
TNRC18-208ENST00000455076 IP6K1Q92551 441 aa28.31■■■□□ 2.12
TNRC18-208ENST00000455076 MAP3K19Q56UN5 1328 aa28.3■■■□□ 2.12
TNRC18-208ENST00000455076 CSB-PGBD3P0DP91 1061 aa28.29■■■□□ 2.12
TNRC18-208ENST00000455076 PDE3BQ13370 1112 aa28.29■■■□□ 2.12
TNRC18-208ENST00000455076 SF3B2Q13435 895 aaKnown RBP28.29■■■□□ 2.12
TNRC18-208ENST00000455076 GGNBP2Q9H3C7 697 aa28.29■■■□□ 2.12
TNRC18-208ENST00000455076 FAM182BQ5T319 152 aa28.28■■■□□ 2.12
TNRC18-208ENST00000455076 C11orf95C9JLR9 678 aaPredicted RBP28.27■■■□□ 2.12
TNRC18-208ENST00000455076 KIF24Q5T7B8 1368 aa28.26■■■□□ 2.12
TNRC18-208ENST00000455076 ANKRD24Q8TF21 1146 aa28.26■■■□□ 2.11
TNRC18-208ENST00000455076 OVOS2A0A0G2JMS6 1433 aa28.26■■■□□ 2.11
TNRC18-208ENST00000455076 BCL9O00512 1426 aa28.26■■■□□ 2.11
TNRC18-208ENST00000455076 HOXC9P31274 260 aa28.24■■■□□ 2.11
TNRC18-208ENST00000455076 DDB1Q16531 1140 aa28.24■■■□□ 2.11
TNRC18-208ENST00000455076 DEFB132Q7Z7B7 95 aa28.24■■■□□ 2.11
TNRC18-208ENST00000455076 TNS2Q63HR2 1409 aa28.24■■■□□ 2.11
TNRC18-208ENST00000455076 ANKRD26Q9UPS8 1709 aa28.23■■■□□ 2.11
TNRC18-208ENST00000455076 CGNL1Q0VF96 1302 aa28.23■■■□□ 2.11
TNRC18-208ENST00000455076 BAG6P46379 1132 aa28.22■■■□□ 2.11
TNRC18-208ENST00000455076 FBLN1P23142 703 aa28.2■■■□□ 2.1
TNRC18-208ENST00000455076 SBF2Q86WG5 1849 aa28.2■■■□□ 2.1
TNRC18-208ENST00000455076 AMPHP49418 695 aa28.19■■■□□ 2.1
TNRC18-208ENST00000455076 NLRP2Q9NX02 1062 aa28.19■■■□□ 2.1
TNRC18-208ENST00000455076 FLT4P35916 1363 aa28.17■■■□□ 2.1
TNRC18-208ENST00000455076 RRS1Q15050 365 aaKnown RBP28.17■■■□□ 2.1
TNRC18-208ENST00000455076 POLR3GLQ9BT43 218 aa28.17■■■□□ 2.1
TNRC18-208ENST00000455076 INSRP06213 1382 aa28.16■■■□□ 2.1
TNRC18-208ENST00000455076 PARD3Q8TEW0 1356 aa28.16■■■□□ 2.1
TNRC18-208ENST00000455076 TRIM37O94972 964 aa28.16■■■□□ 2.1
TNRC18-208ENST00000455076 NSD2O96028 1365 aa28.15■■■□□ 2.1
TNRC18-208ENST00000455076 IL2RBP14784 551 aa28.15■■■□□ 2.1
TNRC18-208ENST00000455076 RGPD3A6NKT7 1758 aaPredicted RBP28.14■■■□□ 2.1
TNRC18-208ENST00000455076 RGPD4Q7Z3J3 1758 aa28.14■■■□□ 2.1
TNRC18-208ENST00000455076 MARCH10Q8NA82 808 aaPredicted RBP28.14■■■□□ 2.1
TNRC18-208ENST00000455076 PANK3Q9H999 370 aa28.14■■■□□ 2.1
TNRC18-208ENST00000455076 KIF7Q2M1P5 1343 aa28.14■■■□□ 2.09
TNRC18-208ENST00000455076 EXOC5O00471 708 aa28.13■■■□□ 2.09
TNRC18-208ENST00000455076 RGPD2P0DJD1 1756 aa28.13■■■□□ 2.09
TNRC18-208ENST00000455076 SMG6Q86US8 1419 aaKnown RBP28.12■■■□□ 2.09
TNRC18-208ENST00000455076 RREB1Q92766 1687 aa28.12■■■□□ 2.09
TNRC18-208ENST00000455076 EN1Q05925 392 aaPredicted RBP28.1■■■□□ 2.09
TNRC18-208ENST00000455076 CAMKK2Q96RR4 588 aa28.1■■■□□ 2.09
TNRC18-208ENST00000455076 MAP2P11137 1827 aaKnown RBP28.09■■■□□ 2.09
TNRC18-208ENST00000455076 LTV1Q96GA3 475 aaPredicted RBP28.09■■■□□ 2.09
TNRC18-208ENST00000455076 SRCAPQ6ZRS2 3230 aa28.09■■■□□ 2.09
TNRC18-208ENST00000455076 HSP90AB2PQ58FF8 381 aa28.07■■■□□ 2.08
TNRC18-208ENST00000455076 EMILIN1Q9Y6C2 1016 aa28.07■■■□□ 2.08
TNRC18-208ENST00000455076 NCAPD2Q15021 1401 aa28.07■■■□□ 2.08
TNRC18-208ENST00000455076 APBA3O96018 575 aa28.06■■■□□ 2.08
TNRC18-208ENST00000455076 NHSQ6T4R5 1651 aa28.06■■■□□ 2.08
TNRC18-208ENST00000455076 SHANK3Q9BYB0 1731 aa28.05■■■□□ 2.08
TNRC18-208ENST00000455076 BCL11BQ9C0K0 894 aaPredicted RBP28.05■■■□□ 2.08
TNRC18-208ENST00000455076 MEGF6O75095 1541 aa28.04■■■□□ 2.08
TNRC18-208ENST00000455076 WASHC2AQ641Q2 1341 aa28.04■■■□□ 2.08
TNRC18-208ENST00000455076 EZH2Q15910 746 aaKnown RBP28.04■■■□□ 2.08
TNRC18-208ENST00000455076 NBPF6Q5VWK0 638 aa28.04■■■□□ 2.08
TNRC18-208ENST00000455076 NBPF4Q96M43 638 aa28.04■■■□□ 2.08
TNRC18-208ENST00000455076 NUP188Q5SRE5 1749 aa28.04■■■□□ 2.08
TNRC18-208ENST00000455076 POLKQ9UBT6 870 aa28.02■■■□□ 2.08
TNRC18-208ENST00000455076 PLSCR1O15162 318 aa28.01■■■□□ 2.07
TNRC18-208ENST00000455076 KNSTRNQ9Y448 316 aa27.99■■■□□ 2.07
TNRC18-208ENST00000455076 AMER1Q5JTC6 1135 aaPredicted RBP27.98■■■□□ 2.07
TNRC18-208ENST00000455076 PER1O15534 1290 aaPredicted RBP27.95■■■□□ 2.06
TNRC18-208ENST00000455076 PTF1AQ7RTS3 328 aa27.95■■■□□ 2.06
TNRC18-208ENST00000455076 PKD1L3Q7Z443 1732 aa27.94■■■□□ 2.06
TNRC18-208ENST00000455076 USHBP1Q8N6Y0 703 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms