RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 AFF2P51816 1311 aa12.82□□□□□ -0.36
ATXN3-205ENST00000454964 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.82□□□□□ -0.36
ATXN3-205ENST00000454964 LTN1O94822 1766 aa12.81□□□□□ -0.36
ATXN3-205ENST00000454964 SMG6Q86US8 1419 aaKnown RBP12.81□□□□□ -0.36
ATXN3-205ENST00000454964 CC2D1BQ5T0F9 858 aaKnown RBP12.81□□□□□ -0.36
ATXN3-205ENST00000454964 CFAP53Q96M91 514 aa12.81□□□□□ -0.36
ATXN3-205ENST00000454964 CDCA7Q9BWT1 371 aaPredicted RBP12.81□□□□□ -0.36
ATXN3-205ENST00000454964 QTRT2Q9H974 415 aaKnown RBP12.81□□□□□ -0.36
ATXN3-205ENST00000454964 SLIT2O94813 1529 aa12.81□□□□□ -0.36
ATXN3-205ENST00000454964 FLT4P35916 1363 aa12.81□□□□□ -0.36
ATXN3-205ENST00000454964 NFAT5O94916 1531 aa12.8□□□□□ -0.36
ATXN3-205ENST00000454964 PLEKHG5O94827 1062 aa12.8□□□□□ -0.36
ATXN3-205ENST00000454964 VPS72Q15906 364 aa12.8□□□□□ -0.36
ATXN3-205ENST00000454964 ZRANB1Q9UGI0 708 aa12.8□□□□□ -0.36
ATXN3-205ENST00000454964 SOX12O15370 315 aa12.79□□□□□ -0.36
ATXN3-205ENST00000454964 RBM6P78332 1123 aaKnown RBP12.79□□□□□ -0.36
ATXN3-205ENST00000454964 LRP6O75581 1613 aa12.79□□□□□ -0.36
ATXN3-205ENST00000454964 ZBTB7CA1YPR0 619 aa12.78□□□□□ -0.36
ATXN3-205ENST00000454964 ANP32CO43423 234 aa12.78□□□□□ -0.36
ATXN3-205ENST00000454964 CSB-PGBD3P0DP91 1061 aa12.78□□□□□ -0.36
ATXN3-205ENST00000454964 RXRBP28702 533 aa12.78□□□□□ -0.36
ATXN3-205ENST00000454964 HOXC9P31274 260 aa12.78□□□□□ -0.36
ATXN3-205ENST00000454964 POLKQ9UBT6 870 aa12.78□□□□□ -0.36
ATXN3-205ENST00000454964 MAP3K19Q56UN5 1328 aa12.78□□□□□ -0.36
ATXN3-205ENST00000454964 INSRP06213 1382 aa12.78□□□□□ -0.36
ATXN3-205ENST00000454964 PLCH1Q4KWH8 1693 aa12.77□□□□□ -0.36
ATXN3-205ENST00000454964 FAM208AQ9UK61 1670 aaKnown RBP12.77□□□□□ -0.36
ATXN3-205ENST00000454964 PPM1GO15355 546 aaPredicted RBP12.77□□□□□ -0.37
ATXN3-205ENST00000454964 CHRNA2Q15822 529 aa12.77□□□□□ -0.37
ATXN3-205ENST00000454964 GJD4Q96KN9 370 aaPredicted RBP12.77□□□□□ -0.37
ATXN3-205ENST00000454964 NUDCQ9Y266 331 aa12.77□□□□□ -0.37
ATXN3-205ENST00000454964 CCDC9Q9Y3X0 531 aaKnown RBP12.77□□□□□ -0.37
ATXN3-205ENST00000454964 WDR17Q8IZU2 1322 aa12.77□□□□□ -0.37
ATXN3-205ENST00000454964 BCL9LQ86UU0 1499 aa12.77□□□□□ -0.37
ATXN3-205ENST00000454964 COL18A1P39060 1754 aa12.76□□□□□ -0.37
ATXN3-205ENST00000454964 TOM1L2Q6ZVM7 507 aa12.76□□□□□ -0.37
ATXN3-205ENST00000454964 CARD10Q9BWT7 1032 aa12.76□□□□□ -0.37
ATXN3-205ENST00000454964 PNNQ9H307 717 aaKnown RBP12.76□□□□□ -0.37
ATXN3-205ENST00000454964 DCAF8L1A6NGE4 600 aa12.75□□□□□ -0.37
ATXN3-205ENST00000454964 TNNT2P45379 298 aaPredicted RBP12.75□□□□□ -0.37
ATXN3-205ENST00000454964 MTHFSP49914 203 aa12.75□□□□□ -0.37
ATXN3-205ENST00000454964 CRB1P82279 1406 aa12.75□□□□□ -0.37
ATXN3-205ENST00000454964 RRS1Q15050 365 aaKnown RBP12.75□□□□□ -0.37
ATXN3-205ENST00000454964 BARGINQ6ZT62 677 aa12.75□□□□□ -0.37
ATXN3-205ENST00000454964 ANKRD24Q8TF21 1146 aa12.75□□□□□ -0.37
ATXN3-205ENST00000454964 LMO7Q8WWI1 1683 aa12.75□□□□□ -0.37
ATXN3-205ENST00000454964 PLEKHG2Q9H7P9 1386 aa12.75□□□□□ -0.37
ATXN3-205ENST00000454964 STRN4Q9NRL3 753 aa12.75□□□□□ -0.37
ATXN3-205ENST00000454964 RGPD5Q99666 1765 aa12.74□□□□□ -0.37
ATXN3-205ENST00000454964 CAMTA1Q9Y6Y1 1673 aa12.74□□□□□ -0.37
ATXN3-205ENST00000454964 PARD3Q8TEW0 1356 aa12.74□□□□□ -0.37
ATXN3-205ENST00000454964 ERBB3P21860 1342 aa12.74□□□□□ -0.37
ATXN3-205ENST00000454964 SPATA31A5Q5VU36 1347 aa12.74□□□□□ -0.37
ATXN3-205ENST00000454964 SPATA31A7Q8IWB4 1347 aa12.74□□□□□ -0.37
ATXN3-205ENST00000454964 ONECUT3O60422 494 aaPredicted RBP12.74□□□□□ -0.37
ATXN3-205ENST00000454964 TCP11L2Q8N4U5 519 aa12.74□□□□□ -0.37
ATXN3-205ENST00000454964 AXIN2Q9Y2T1 843 aa12.74□□□□□ -0.37
ATXN3-205ENST00000454964 COL5A2P05997 1499 aaPredicted RBP12.73□□□□□ -0.37
ATXN3-205ENST00000454964 ATRNO75882 1429 aa12.73□□□□□ -0.37
ATXN3-205ENST00000454964 MYBBP1AQ9BQG0 1328 aaKnown RBP12.73□□□□□ -0.37
ATXN3-205ENST00000454964 DIAPH1O60610 1272 aaKnown RBP12.73□□□□□ -0.37
ATXN3-205ENST00000454964 NLRP2Q9NX02 1062 aa12.73□□□□□ -0.37
ATXN3-205ENST00000454964 CDK12Q9NYV4 1490 aaPredicted RBP12.72□□□□□ -0.37
ATXN3-205ENST00000454964 SPATA31A1Q5TZJ5 1347 aa12.72□□□□□ -0.37
ATXN3-205ENST00000454964 SLC4A2P04920 1241 aa12.72□□□□□ -0.37
ATXN3-205ENST00000454964 PPP2R1AP30153 589 aa12.72□□□□□ -0.37
ATXN3-205ENST00000454964 PRKRIP1Q9H875 184 aaPredicted RBP12.72□□□□□ -0.37
ATXN3-205ENST00000454964 EMILIN1Q9Y6C2 1016 aa12.72□□□□□ -0.37
ATXN3-205ENST00000454964 NRAPQ86VF7 1730 aa12.71□□□□□ -0.37
ATXN3-205ENST00000454964 ZBTB22O15209 634 aa12.71□□□□□ -0.37
ATXN3-205ENST00000454964 NEFMP07197 916 aa12.71□□□□□ -0.37
ATXN3-205ENST00000454964 HSP90AB2PQ58FF8 381 aa12.71□□□□□ -0.37
ATXN3-205ENST00000454964 LARP1Q6PKG0 1096 aaKnown RBP12.7□□□□□ -0.38
ATXN3-205ENST00000454964 RAPGEF4Q8WZA2 1011 aa12.7□□□□□ -0.38
ATXN3-205ENST00000454964 EXOC5O00471 708 aa12.69□□□□□ -0.38
ATXN3-205ENST00000454964 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.69□□□□□ -0.38
ATXN3-205ENST00000454964 RGS17Q9UGC6 210 aaPredicted RBP12.69□□□□□ -0.38
ATXN3-205ENST00000454964 IL2RBP14784 551 aa12.68□□□□□ -0.38
ATXN3-205ENST00000454964 LTV1Q96GA3 475 aaPredicted RBP12.68□□□□□ -0.38
ATXN3-205ENST00000454964 TATP17735 454 aaPredicted RBP12.67□□□□□ -0.38
ATXN3-205ENST00000454964 FBLN1P23142 703 aa12.67□□□□□ -0.38
ATXN3-205ENST00000454964 HMGB2P26583 209 aaKnown RBP12.67□□□□□ -0.38
ATXN3-205ENST00000454964 PDE3BQ13370 1112 aa12.67□□□□□ -0.38
ATXN3-205ENST00000454964 CNGB1Q14028 1251 aaPredicted RBP12.67□□□□□ -0.38
ATXN3-205ENST00000454964 EIF4A2Q14240 407 aaKnown RBP12.67□□□□□ -0.38
ATXN3-205ENST00000454964 AMOTQ4VCS5 1084 aa12.67□□□□□ -0.38
ATXN3-205ENST00000454964 POTEAQ6S8J7 498 aa12.67□□□□□ -0.38
ATXN3-205ENST00000454964 A0A0G2JS52 829 aa12.66□□□□□ -0.38
ATXN3-205ENST00000454964 FCHSD2O94868 740 aa12.66□□□□□ -0.38
ATXN3-205ENST00000454964 IL13P35225 146 aa12.66□□□□□ -0.38
ATXN3-205ENST00000454964 MYT1Q01538 1121 aa12.66□□□□□ -0.38
ATXN3-205ENST00000454964 DDB1Q16531 1140 aa12.66□□□□□ -0.38
ATXN3-205ENST00000454964 USP35Q9P2H5 1018 aa12.66□□□□□ -0.38
ATXN3-205ENST00000454964 SPG7Q9UQ90 795 aa12.66□□□□□ -0.38
ATXN3-205ENST00000454964 FAM98CQ17RN3 349 aaKnown RBP12.65□□□□□ -0.38
ATXN3-205ENST00000454964 NBPF6Q5VWK0 638 aa12.65□□□□□ -0.38
ATXN3-205ENST00000454964 DIEXFQ68CQ4 756 aaKnown RBP12.65□□□□□ -0.38
ATXN3-205ENST00000454964 NBPF4Q96M43 638 aa12.65□□□□□ -0.38
ATXN3-205ENST00000454964 EYA1Q99502 592 aa12.65□□□□□ -0.38
ATXN3-205ENST00000454964 PEAK1Q9H792 1746 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms