RNA–Protein interactions for RNA: ENST00000454906.6

EXTL3-202, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-202ENST00000454906 VPS72Q15906 364 aa12.27□□□□□ -0.45
EXTL3-202ENST00000454906 LARP1Q6PKG0 1096 aaKnown RBP12.27□□□□□ -0.45
EXTL3-202ENST00000454906 GGNBP2Q9H3C7 697 aa12.27□□□□□ -0.45
EXTL3-202ENST00000454906 PARP4Q9UKK3 1724 aaKnown RBP12.27□□□□□ -0.45
EXTL3-202ENST00000454906 NINLQ9Y2I6 1382 aa12.27□□□□□ -0.45
EXTL3-202ENST00000454906 OVOS2A0A0J9YW53 1432 aa12.27□□□□□ -0.45
EXTL3-202ENST00000454906 OVOS2Q6IE36 1432 aa12.27□□□□□ -0.45
EXTL3-202ENST00000454906 SBF2Q86WG5 1849 aa12.26□□□□□ -0.45
EXTL3-202ENST00000454906 SEPT12Q8IYM1 358 aa12.26□□□□□ -0.45
EXTL3-202ENST00000454906 RGPD1P0DJD0 1748 aa12.25□□□□□ -0.45
EXTL3-202ENST00000454906 C11orf95C9JLR9 678 aaPredicted RBP12.25□□□□□ -0.45
EXTL3-202ENST00000454906 CSB-PGBD3P0DP91 1061 aa12.25□□□□□ -0.45
EXTL3-202ENST00000454906 CDCA8Q53HL2 280 aa12.25□□□□□ -0.45
EXTL3-202ENST00000454906 LTV1Q96GA3 475 aaPredicted RBP12.25□□□□□ -0.45
EXTL3-202ENST00000454906 CPDO75976 1380 aa12.25□□□□□ -0.45
EXTL3-202ENST00000454906 TNS1Q9HBL0 1735 aaKnown RBP12.25□□□□□ -0.45
EXTL3-202ENST00000454906 SPATA31A5Q5VU36 1347 aa12.24□□□□□ -0.45
EXTL3-202ENST00000454906 SPATA31A7Q8IWB4 1347 aa12.24□□□□□ -0.45
EXTL3-202ENST00000454906 COG3Q96JB2 828 aa12.24□□□□□ -0.45
EXTL3-202ENST00000454906 AXIN2Q9Y2T1 843 aa12.24□□□□□ -0.45
EXTL3-202ENST00000454906 SPATA31A1Q5TZJ5 1347 aa12.23□□□□□ -0.45
EXTL3-202ENST00000454906 TOM1L2Q6ZVM7 507 aa12.23□□□□□ -0.45
EXTL3-202ENST00000454906 USP31Q70CQ4 1352 aa12.22□□□□□ -0.45
EXTL3-202ENST00000454906 TNNT2P45379 298 aaPredicted RBP12.22□□□□□ -0.45
EXTL3-202ENST00000454906 RRS1Q15050 365 aaKnown RBP12.22□□□□□ -0.45
EXTL3-202ENST00000454906 KCNH5Q8NCM2 988 aa12.22□□□□□ -0.45
EXTL3-202ENST00000454906 UPF1Q92900 1129 aaKnown RBP eCLIP12.22□□□□□ -0.45
EXTL3-202ENST00000454906 CRB1P82279 1406 aa12.21□□□□□ -0.45
EXTL3-202ENST00000454906 AATKQ6ZMQ8 1374 aa12.21□□□□□ -0.45
EXTL3-202ENST00000454906 ARHGEF25Q86VW2 580 aa12.21□□□□□ -0.45
EXTL3-202ENST00000454906 PUS7Q96PZ0 661 aaKnown RBP12.21□□□□□ -0.45
EXTL3-202ENST00000454906 CARD14Q9BXL6 1004 aa12.21□□□□□ -0.45
EXTL3-202ENST00000454906 SHANK3Q9BYB0 1731 aa12.2□□□□□ -0.46
EXTL3-202ENST00000454906 KIF7Q2M1P5 1343 aa12.2□□□□□ -0.46
EXTL3-202ENST00000454906 SLC24A1O60721 1099 aa12.2□□□□□ -0.46
EXTL3-202ENST00000454906 VIRMAQ69YN4 1812 aaKnown RBP12.19□□□□□ -0.46
EXTL3-202ENST00000454906 FYB1O15117 783 aa12.19□□□□□ -0.46
EXTL3-202ENST00000454906 PPM1GO15355 546 aaPredicted RBP12.19□□□□□ -0.46
EXTL3-202ENST00000454906 KRT27Q7Z3Y8 459 aa12.19□□□□□ -0.46
EXTL3-202ENST00000454906 PANK3Q9H999 370 aa12.19□□□□□ -0.46
EXTL3-202ENST00000454906 ABCC6O95255 1503 aa12.19□□□□□ -0.46
EXTL3-202ENST00000454906 MAP3K19Q56UN5 1328 aa12.18□□□□□ -0.46
EXTL3-202ENST00000454906 WDR17Q8IZU2 1322 aa12.18□□□□□ -0.46
EXTL3-202ENST00000454906 DOT1LQ8TEK3 1739 aa12.18□□□□□ -0.46
EXTL3-202ENST00000454906 AMPHP49418 695 aa12.18□□□□□ -0.46
EXTL3-202ENST00000454906 TCP11L2Q8N4U5 519 aa12.18□□□□□ -0.46
EXTL3-202ENST00000454906 ANKRD24Q8TF21 1146 aa12.18□□□□□ -0.46
EXTL3-202ENST00000454906 NLRP2Q9NX02 1062 aa12.18□□□□□ -0.46
EXTL3-202ENST00000454906 USHBP1Q8N6Y0 703 aa12.16□□□□□ -0.46
EXTL3-202ENST00000454906 EMILIN1Q9Y6C2 1016 aa12.16□□□□□ -0.46
EXTL3-202ENST00000454906 ERBB3P21860 1342 aa12.15□□□□□ -0.46
EXTL3-202ENST00000454906 CGNL1Q0VF96 1302 aa12.15□□□□□ -0.46
EXTL3-202ENST00000454906 BTAF1O14981 1849 aa12.15□□□□□ -0.46
EXTL3-202ENST00000454906 CCDC7Q96M83 1385 aa12.15□□□□□ -0.46
EXTL3-202ENST00000454906 HOXC9P31274 260 aa12.14□□□□□ -0.47
EXTL3-202ENST00000454906 PDE3BQ13370 1112 aa12.14□□□□□ -0.47
EXTL3-202ENST00000454906 DEFB132Q7Z7B7 95 aa12.14□□□□□ -0.47
EXTL3-202ENST00000454906 BLMP54132 1417 aaPredicted RBP12.13□□□□□ -0.47
EXTL3-202ENST00000454906 NUP188Q5SRE5 1749 aa12.13□□□□□ -0.47
EXTL3-202ENST00000454906 WASHC2AQ641Q2 1341 aa12.12□□□□□ -0.47
EXTL3-202ENST00000454906 SMG6Q86US8 1419 aaKnown RBP12.12□□□□□ -0.47
EXTL3-202ENST00000454906 ITGB4P16144 1822 aa12.12□□□□□ -0.47
EXTL3-202ENST00000454906 TRIM37O94972 964 aa12.12□□□□□ -0.47
EXTL3-202ENST00000454906 SF3B2Q13435 895 aaKnown RBP12.12□□□□□ -0.47
EXTL3-202ENST00000454906 DDB1Q16531 1140 aa12.12□□□□□ -0.47
EXTL3-202ENST00000454906 CC2D1BQ5T0F9 858 aaKnown RBP12.12□□□□□ -0.47
EXTL3-202ENST00000454906 NHSQ6T4R5 1651 aa12.12□□□□□ -0.47
EXTL3-202ENST00000454906 RREB1Q92766 1687 aa12.12□□□□□ -0.47
EXTL3-202ENST00000454906 RTL1A6NKG5 1358 aa12.11□□□□□ -0.47
EXTL3-202ENST00000454906 ONECUT3O60422 494 aaPredicted RBP12.11□□□□□ -0.47
EXTL3-202ENST00000454906 HSP90AB2PQ58FF8 381 aa12.11□□□□□ -0.47
EXTL3-202ENST00000454906 BARGINQ6ZT62 677 aa12.11□□□□□ -0.47
EXTL3-202ENST00000454906 IP6K1Q92551 441 aa12.11□□□□□ -0.47
EXTL3-202ENST00000454906 KNSTRNQ9Y448 316 aa12.11□□□□□ -0.47
EXTL3-202ENST00000454906 MEGF6O75095 1541 aa12.11□□□□□ -0.47
EXTL3-202ENST00000454906 DISP2A7MBM2 1401 aa12.11□□□□□ -0.47
EXTL3-202ENST00000454906 TNS2Q63HR2 1409 aa12.11□□□□□ -0.47
EXTL3-202ENST00000454906 FLT4P35916 1363 aa12.1□□□□□ -0.47
EXTL3-202ENST00000454906 CARD10Q9BWT7 1032 aa12.1□□□□□ -0.47
EXTL3-202ENST00000454906 PKD1L3Q7Z443 1732 aa12.1□□□□□ -0.47
EXTL3-202ENST00000454906 TOGARAM1Q9Y4F4 1720 aa12.09□□□□□ -0.47
EXTL3-202ENST00000454906 MORC1Q86VD1 984 aa12.09□□□□□ -0.47
EXTL3-202ENST00000454906 THRAP3Q9Y2W1 955 aaKnown RBP12.09□□□□□ -0.47
EXTL3-202ENST00000454906 OVOS2A0A0G2JMS6 1433 aa12.09□□□□□ -0.47
EXTL3-202ENST00000454906 ACSBG1Q96GR2 724 aa12.08□□□□□ -0.48
EXTL3-202ENST00000454906 IL2RBP14784 551 aa12.07□□□□□ -0.48
EXTL3-202ENST00000454906 EN1Q05925 392 aaPredicted RBP12.07□□□□□ -0.48
EXTL3-202ENST00000454906 PTF1AQ7RTS3 328 aa12.07□□□□□ -0.48
EXTL3-202ENST00000454906 MARCH10Q8NA82 808 aaPredicted RBP12.07□□□□□ -0.48
EXTL3-202ENST00000454906 NBPF6Q5VWK0 638 aa12.06□□□□□ -0.48
EXTL3-202ENST00000454906 DDX54Q8TDD1 881 aaKnown RBP12.06□□□□□ -0.48
EXTL3-202ENST00000454906 NBPF4Q96M43 638 aa12.06□□□□□ -0.48
EXTL3-202ENST00000454906 NSD2O96028 1365 aa12.05□□□□□ -0.48
EXTL3-202ENST00000454906 INSRP06213 1382 aa12.05□□□□□ -0.48
EXTL3-202ENST00000454906 TUBGCP6Q96RT7 1819 aa12.05□□□□□ -0.48
EXTL3-202ENST00000454906 ZNF316A6NFI3 1004 aaPredicted RBP12.05□□□□□ -0.48
EXTL3-202ENST00000454906 EXOC5O00471 708 aa12.05□□□□□ -0.48
EXTL3-202ENST00000454906 APBA3O96018 575 aa12.05□□□□□ -0.48
EXTL3-202ENST00000454906 BAG6P46379 1132 aa12.05□□□□□ -0.48
EXTL3-202ENST00000454906 FAM196AQ6ZSG2 479 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms