RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 DDB1Q16531 1140 aa14.44□□□□□ -0.1
CLCN4-204ENST00000454850 PIK3C2AO00443 1686 aa14.44□□□□□ -0.1
CLCN4-204ENST00000454850 TOM1L2Q6ZVM7 507 aa14.43□□□□□ -0.1
CLCN4-204ENST00000454850 CABP2Q9NPB3 220 aa14.43□□□□□ -0.1
CLCN4-204ENST00000454850 SLIT3O75094 1523 aa14.42□□□□□ -0.1
CLCN4-204ENST00000454850 PLSCR1O15162 318 aa14.42□□□□□ -0.1
CLCN4-204ENST00000454850 NLRP6P59044 892 aa14.42□□□□□ -0.1
CLCN4-204ENST00000454850 ATF5Q9Y2D1 282 aaPredicted RBP14.41□□□□□ -0.1
CLCN4-204ENST00000454850 AATKQ6ZMQ8 1374 aa14.41□□□□□ -0.1
CLCN4-204ENST00000454850 USP6P35125 1406 aa14.41□□□□□ -0.1
CLCN4-204ENST00000454850 NBPF1Q3BBV0 1214 aa14.4□□□□□ -0.1
CLCN4-204ENST00000454850 MARCH10Q8NA82 808 aaPredicted RBP14.39□□□□□ -0.11
CLCN4-204ENST00000454850 CENPJQ9HC77 1338 aaPredicted RBP14.39□□□□□ -0.11
CLCN4-204ENST00000454850 BRD4O60885 1362 aaPredicted RBP14.38□□□□□ -0.11
CLCN4-204ENST00000454850 SOX12O15370 315 aa14.38□□□□□ -0.11
CLCN4-204ENST00000454850 PROM2Q8N271 834 aa14.38□□□□□ -0.11
CLCN4-204ENST00000454850 ZNF784Q8NCA9 323 aaPredicted RBP14.38□□□□□ -0.11
CLCN4-204ENST00000454850 STK32BQ9NY57 414 aa14.38□□□□□ -0.11
CLCN4-204ENST00000454850 CPSF1Q10570 1443 aaKnown RBP14.38□□□□□ -0.11
CLCN4-204ENST00000454850 WDR17Q8IZU2 1322 aa14.38□□□□□ -0.11
CLCN4-204ENST00000454850 PTGER2P43116 358 aa14.37□□□□□ -0.11
CLCN4-204ENST00000454850 CABP1Q9NZU7 370 aa14.37□□□□□ -0.11
CLCN4-204ENST00000454850 AXIN2Q9Y2T1 843 aa14.37□□□□□ -0.11
CLCN4-204ENST00000454850 NHSQ6T4R5 1651 aa14.36□□□□□ -0.11
CLCN4-204ENST00000454850 CSB-PGBD3P0DP91 1061 aa14.36□□□□□ -0.11
CLCN4-204ENST00000454850 TXNRD1Q16881 649 aa14.36□□□□□ -0.11
CLCN4-204ENST00000454850 FHDC1Q9C0D6 1143 aaPredicted RBP14.36□□□□□ -0.11
CLCN4-204ENST00000454850 GOLGB1Q14789 3259 aaKnown RBP14.35□□□□□ -0.11
CLCN4-204ENST00000454850 BTAF1O14981 1849 aa14.35□□□□□ -0.11
CLCN4-204ENST00000454850 SLC15A2Q16348 729 aa14.34□□□□□ -0.11
CLCN4-204ENST00000454850 CDCA7Q9BWT1 371 aaPredicted RBP14.34□□□□□ -0.11
CLCN4-204ENST00000454850 TRPM1Q7Z4N2 1603 aa14.33□□□□□ -0.11
CLCN4-204ENST00000454850 BCL9O00512 1426 aa14.33□□□□□ -0.11
CLCN4-204ENST00000454850 LTN1O94822 1766 aa14.33□□□□□ -0.12
CLCN4-204ENST00000454850 SENP3-EIF4A1A0A087X0R7 540 aa14.33□□□□□ -0.12
CLCN4-204ENST00000454850 SYT17Q9BSW7 474 aa14.33□□□□□ -0.12
CLCN4-204ENST00000454850 EXOC5O00471 708 aa14.32□□□□□ -0.12
CLCN4-204ENST00000454850 CARD10Q9BWT7 1032 aa14.32□□□□□ -0.12
CLCN4-204ENST00000454850 MTFR1LQ9H019 292 aa14.32□□□□□ -0.12
CLCN4-204ENST00000454850 PAPPAQ13219 1627 aa14.32□□□□□ -0.12
CLCN4-204ENST00000454850 TNS2Q63HR2 1409 aa14.32□□□□□ -0.12
CLCN4-204ENST00000454850 NFAT5O94916 1531 aa14.31□□□□□ -0.12
CLCN4-204ENST00000454850 ARHGEF25Q86VW2 580 aa14.31□□□□□ -0.12
CLCN4-204ENST00000454850 ACSBG1Q96GR2 724 aa14.31□□□□□ -0.12
CLCN4-204ENST00000454850 KCNH5Q8NCM2 988 aa14.3□□□□□ -0.12
CLCN4-204ENST00000454850 TTC21BQ7Z4L5 1316 aa14.3□□□□□ -0.12
CLCN4-204ENST00000454850 ABCC6O95255 1503 aa14.3□□□□□ -0.12
CLCN4-204ENST00000454850 MON2Q7Z3U7 1717 aa14.29□□□□□ -0.12
CLCN4-204ENST00000454850 TUBGCP6Q96RT7 1819 aa14.29□□□□□ -0.12
CLCN4-204ENST00000454850 CEP350Q5VT06 3117 aa14.29□□□□□ -0.12
CLCN4-204ENST00000454850 ARXQ96QS3 562 aa14.29□□□□□ -0.12
CLCN4-204ENST00000454850 EVC2Q86UK5 1308 aa14.29□□□□□ -0.12
CLCN4-204ENST00000454850 CCDC7Q96M83 1385 aa14.29□□□□□ -0.12
CLCN4-204ENST00000454850 SGIP1Q9BQI5 828 aa14.28□□□□□ -0.12
CLCN4-204ENST00000454850 C1QTNF8P60827 252 aa14.27□□□□□ -0.13
CLCN4-204ENST00000454850 KLHL34Q8N239 644 aa14.27□□□□□ -0.13
CLCN4-204ENST00000454850 QSER1Q2KHR3 1735 aa14.27□□□□□ -0.13
CLCN4-204ENST00000454850 KTN1Q86UP2 1357 aaKnown RBP14.25□□□□□ -0.13
CLCN4-204ENST00000454850 TTC21AQ8NDW8 1320 aa14.25□□□□□ -0.13
CLCN4-204ENST00000454850 GPR162Q16538 588 aa14.25□□□□□ -0.13
CLCN4-204ENST00000454850 ZNF827Q17R98 1081 aa14.25□□□□□ -0.13
CLCN4-204ENST00000454850 PELP1Q8IZL8 1130 aaKnown RBP14.25□□□□□ -0.13
CLCN4-204ENST00000454850 ZNF692Q9BU19 519 aaPredicted RBP14.25□□□□□ -0.13
CLCN4-204ENST00000454850 NLRP2Q9NX02 1062 aa14.25□□□□□ -0.13
CLCN4-204ENST00000454850 USP54Q70EL1 1684 aa14.24□□□□□ -0.13
CLCN4-204ENST00000454850 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.24□□□□□ -0.13
CLCN4-204ENST00000454850 MAP3K5Q99683 1374 aa14.23□□□□□ -0.13
CLCN4-204ENST00000454850 ERBB3P21860 1342 aa14.22□□□□□ -0.13
CLCN4-204ENST00000454850 COL24A1Q17RW2 1714 aa14.22□□□□□ -0.13
CLCN4-204ENST00000454850 DOT1LQ8TEK3 1739 aa14.22□□□□□ -0.13
CLCN4-204ENST00000454850 IL2RBP14784 551 aa14.22□□□□□ -0.13
CLCN4-204ENST00000454850 LRRC4BQ9NT99 713 aa14.21□□□□□ -0.13
CLCN4-204ENST00000454850 GIGYF1O75420 1035 aaPredicted RBP14.2□□□□□ -0.14
CLCN4-204ENST00000454850 L3MBTL2Q969R5 705 aa14.2□□□□□ -0.14
CLCN4-204ENST00000454850 SHANK3Q9BYB0 1731 aa14.2□□□□□ -0.14
CLCN4-204ENST00000454850 ROCK2O75116 1388 aaKnown RBP14.2□□□□□ -0.14
CLCN4-204ENST00000454850 RGPD2P0DJD1 1756 aa14.19□□□□□ -0.14
CLCN4-204ENST00000454850 NME9Q86XW9 330 aa14.19□□□□□ -0.14
CLCN4-204ENST00000454850 ANKRD24Q8TF21 1146 aa14.19□□□□□ -0.14
CLCN4-204ENST00000454850 FAM208AQ9UK61 1670 aaKnown RBP14.19□□□□□ -0.14
CLCN4-204ENST00000454850 LY75O60449 1722 aa14.18□□□□□ -0.14
CLCN4-204ENST00000454850 POLD1P28340 1107 aa14.18□□□□□ -0.14
CLCN4-204ENST00000454850 KCNQ4P56696 695 aa14.18□□□□□ -0.14
CLCN4-204ENST00000454850 NLGN2Q8NFZ4 835 aa14.17□□□□□ -0.14
CLCN4-204ENST00000454850 DDX54Q8TDD1 881 aaKnown RBP14.17□□□□□ -0.14
CLCN4-204ENST00000454850 AKT1S1Q96B36 256 aa14.17□□□□□ -0.14
CLCN4-204ENST00000454850 USP31Q70CQ4 1352 aa14.17□□□□□ -0.14
CLCN4-204ENST00000454850 PNPLA7Q6ZV29 1317 aa14.16□□□□□ -0.14
CLCN4-204ENST00000454850 SYTL4Q96C24 671 aaPredicted RBP14.16□□□□□ -0.14
CLCN4-204ENST00000454850 TFCP2L1Q9NZI6 479 aa14.16□□□□□ -0.14
CLCN4-204ENST00000454850 CD163L1Q9NR16 1453 aa14.15□□□□□ -0.14
CLCN4-204ENST00000454850 SLC27A3Q5K4L6 730 aa14.15□□□□□ -0.14
CLCN4-204ENST00000454850 TMC1Q8TDI8 760 aa14.15□□□□□ -0.14
CLCN4-204ENST00000454850 SLC16A10Q8TF71 515 aa14.15□□□□□ -0.14
CLCN4-204ENST00000454850 LTV1Q96GA3 475 aaPredicted RBP14.15□□□□□ -0.14
CLCN4-204ENST00000454850 SBNO2Q9Y2G9 1366 aa14.14□□□□□ -0.15
CLCN4-204ENST00000454850 MSH5O43196 834 aa14.13□□□□□ -0.15
CLCN4-204ENST00000454850 SIN3AQ96ST3 1273 aa14.13□□□□□ -0.15
CLCN4-204ENST00000454850 NEUROD1Q13562 356 aa14.12□□□□□ -0.15
CLCN4-204ENST00000454850 IFFO2Q5TF58 517 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms