RNA–Protein interactions for RNA: ENST00000454441.2

LINC01287-203, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 5 BASIC

Gene LINC01287, Length 1,007 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-203ENST00000454441 PDE3BQ13370 1112 aa16.81■□□□□ 0.28
LINC01287-203ENST00000454441 NFAT5O94916 1531 aa16.8■□□□□ 0.28
LINC01287-203ENST00000454441 HDGFL2Q7Z4V5 671 aaPredicted RBP16.8■□□□□ 0.28
LINC01287-203ENST00000454441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.8■□□□□ 0.28
LINC01287-203ENST00000454441 LTN1O94822 1766 aa16.79■□□□□ 0.28
LINC01287-203ENST00000454441 ST20-MTHFSA0A0A6YYL1 179 aa16.79■□□□□ 0.28
LINC01287-203ENST00000454441 FAM196AQ6ZSG2 479 aa16.79■□□□□ 0.28
LINC01287-203ENST00000454441 ARHGEF25Q86VW2 580 aa16.79■□□□□ 0.28
LINC01287-203ENST00000454441 SLC12A5Q9H2X9 1139 aa16.79■□□□□ 0.28
LINC01287-203ENST00000454441 TOM1L2Q6ZVM7 507 aa16.78■□□□□ 0.28
LINC01287-203ENST00000454441 AXIN2Q9Y2T1 843 aa16.78■□□□□ 0.28
LINC01287-203ENST00000454441 LRRC37A3O60309 1634 aa16.78■□□□□ 0.28
LINC01287-203ENST00000454441 EN1Q05925 392 aaPredicted RBP16.77■□□□□ 0.28
LINC01287-203ENST00000454441 PUS7Q96PZ0 661 aaKnown RBP16.77■□□□□ 0.28
LINC01287-203ENST00000454441 TESK2Q96S53 571 aa16.77■□□□□ 0.28
LINC01287-203ENST00000454441 TERF2IPQ9NYB0 399 aa16.77■□□□□ 0.28
LINC01287-203ENST00000454441 DISP2A7MBM2 1401 aa16.77■□□□□ 0.27
LINC01287-203ENST00000454441 EDC4Q6P2E9 1401 aaKnown RBP16.77■□□□□ 0.27
LINC01287-203ENST00000454441 SRCAPQ6ZRS2 3230 aa16.77■□□□□ 0.27
LINC01287-203ENST00000454441 A0A1W2PP64 1363 aa16.77■□□□□ 0.27
LINC01287-203ENST00000454441 USP31Q70CQ4 1352 aa16.77■□□□□ 0.27
LINC01287-203ENST00000454441 ABCC6O95255 1503 aa16.76■□□□□ 0.27
LINC01287-203ENST00000454441 WDR17Q8IZU2 1322 aa16.76■□□□□ 0.27
LINC01287-203ENST00000454441 TRIM37O94972 964 aa16.76■□□□□ 0.27
LINC01287-203ENST00000454441 NME9Q86XW9 330 aa16.76■□□□□ 0.27
LINC01287-203ENST00000454441 RNF216Q9NWF9 866 aaPredicted RBP16.76■□□□□ 0.27
LINC01287-203ENST00000454441 SLC24A1O60721 1099 aa16.75■□□□□ 0.27
LINC01287-203ENST00000454441 NINLQ9Y2I6 1382 aa16.75■□□□□ 0.27
LINC01287-203ENST00000454441 CSB-PGBD3P0DP91 1061 aa16.74■□□□□ 0.27
LINC01287-203ENST00000454441 USP47Q96K76 1375 aa16.74■□□□□ 0.27
LINC01287-203ENST00000454441 SBF2Q86WG5 1849 aa16.73■□□□□ 0.27
LINC01287-203ENST00000454441 PCGF6Q9BYE7 350 aa16.73■□□□□ 0.27
LINC01287-203ENST00000454441 PEAK1Q9H792 1746 aa16.73■□□□□ 0.27
LINC01287-203ENST00000454441 APBA3O96018 575 aa16.72■□□□□ 0.27
LINC01287-203ENST00000454441 OVOS2A0A0G2JMS6 1433 aa16.71■□□□□ 0.27
LINC01287-203ENST00000454441 OVOS2A0A0J9YW53 1432 aa16.71■□□□□ 0.27
LINC01287-203ENST00000454441 OVOS2Q6IE36 1432 aa16.71■□□□□ 0.27
LINC01287-203ENST00000454441 EZH2Q15910 746 aaKnown RBP16.71■□□□□ 0.27
LINC01287-203ENST00000454441 DDB1Q16531 1140 aa16.71■□□□□ 0.27
LINC01287-203ENST00000454441 RREB1Q92766 1687 aa16.71■□□□□ 0.27
LINC01287-203ENST00000454441 PSDA5PKW4 1024 aaPredicted RBP16.7■□□□□ 0.26
LINC01287-203ENST00000454441 TMF1P82094 1093 aa16.7■□□□□ 0.26
LINC01287-203ENST00000454441 CARD10Q9BWT7 1032 aa16.7■□□□□ 0.26
LINC01287-203ENST00000454441 RNF39Q9H2S5 420 aa16.7■□□□□ 0.26
LINC01287-203ENST00000454441 C11orf95C9JLR9 678 aaPredicted RBP16.69■□□□□ 0.26
LINC01287-203ENST00000454441 CDCA7Q9BWT1 371 aaPredicted RBP16.69■□□□□ 0.26
LINC01287-203ENST00000454441 CLSPNQ9HAW4 1339 aa16.69■□□□□ 0.26
LINC01287-203ENST00000454441 NUP188Q5SRE5 1749 aa16.68■□□□□ 0.26
LINC01287-203ENST00000454441 PARD3Q8TEW0 1356 aa16.68■□□□□ 0.26
LINC01287-203ENST00000454441 CCDC7Q96M83 1385 aa16.68■□□□□ 0.26
LINC01287-203ENST00000454441 CAMKK2Q96RR4 588 aa16.68■□□□□ 0.26
LINC01287-203ENST00000454441 LRP5O75197 1615 aa16.67■□□□□ 0.26
LINC01287-203ENST00000454441 ANKRD36BQ8N2N9 1353 aa16.67■□□□□ 0.26
LINC01287-203ENST00000454441 TIMELESSQ9UNS1 1208 aa16.67■□□□□ 0.26
LINC01287-203ENST00000454441 ERBB3P21860 1342 aa16.67■□□□□ 0.26
LINC01287-203ENST00000454441 NCBP3Q53F19 620 aaKnown RBP16.66■□□□□ 0.26
LINC01287-203ENST00000454441 RGPD3A6NKT7 1758 aaPredicted RBP16.66■□□□□ 0.26
LINC01287-203ENST00000454441 RGPD4Q7Z3J3 1758 aa16.66■□□□□ 0.26
LINC01287-203ENST00000454441 KIF20BQ96Q89 1820 aa16.66■□□□□ 0.26
LINC01287-203ENST00000454441 FAM208AQ9UK61 1670 aaKnown RBP16.65■□□□□ 0.26
LINC01287-203ENST00000454441 KCNA4P22459 653 aa16.65■□□□□ 0.26
LINC01287-203ENST00000454441 R3HDM1Q15032 1099 aaKnown RBP16.65■□□□□ 0.26
LINC01287-203ENST00000454441 COG3Q96JB2 828 aa16.65■□□□□ 0.26
LINC01287-203ENST00000454441 CDCA8Q53HL2 280 aa16.64■□□□□ 0.25
LINC01287-203ENST00000454441 MARCH10Q8NA82 808 aaPredicted RBP16.64■□□□□ 0.25
LINC01287-203ENST00000454441 ANKRD24Q8TF21 1146 aa16.64■□□□□ 0.25
LINC01287-203ENST00000454441 NLRP2Q9NX02 1062 aa16.64■□□□□ 0.25
LINC01287-203ENST00000454441 MYOM1P52179 1685 aa16.64■□□□□ 0.25
LINC01287-203ENST00000454441 TNS2Q63HR2 1409 aa16.63■□□□□ 0.25
LINC01287-203ENST00000454441 EXOC5O00471 708 aa16.63■□□□□ 0.25
LINC01287-203ENST00000454441 IP6K1Q92551 441 aa16.61■□□□□ 0.25
LINC01287-203ENST00000454441 KAT6BQ8WYB5 2073 aa16.61■□□□□ 0.25
LINC01287-203ENST00000454441 RGPD2P0DJD1 1756 aa16.61■□□□□ 0.25
LINC01287-203ENST00000454441 BCL9O00512 1426 aa16.61■□□□□ 0.25
LINC01287-203ENST00000454441 BCL11BQ9C0K0 894 aaPredicted RBP16.6■□□□□ 0.25
LINC01287-203ENST00000454441 IL2RBP14784 551 aa16.59■□□□□ 0.25
LINC01287-203ENST00000454441 NBPF14Q5TI25 921 aa16.59■□□□□ 0.25
LINC01287-203ENST00000454441 LTV1Q96GA3 475 aaPredicted RBP16.59■□□□□ 0.25
LINC01287-203ENST00000454441 MAP3K19Q56UN5 1328 aa16.59■□□□□ 0.25
LINC01287-203ENST00000454441 NHSQ6T4R5 1651 aa16.59■□□□□ 0.25
LINC01287-203ENST00000454441 FBLN1P23142 703 aa16.58■□□□□ 0.24
LINC01287-203ENST00000454441 AMPHP49418 695 aa16.58■□□□□ 0.24
LINC01287-203ENST00000454441 PTF1AQ7RTS3 328 aa16.58■□□□□ 0.24
LINC01287-203ENST00000454441 CCER1Q8TC90 406 aaPredicted RBP16.58■□□□□ 0.24
LINC01287-203ENST00000454441 GGNBP2Q9H3C7 697 aa16.58■□□□□ 0.24
LINC01287-203ENST00000454441 FYB1O15117 783 aa16.57■□□□□ 0.24
LINC01287-203ENST00000454441 PLSCR1O15162 318 aa16.57■□□□□ 0.24
LINC01287-203ENST00000454441 HOXC9P31274 260 aa16.57■□□□□ 0.24
LINC01287-203ENST00000454441 RTL1A6NKG5 1358 aa16.55■□□□□ 0.24
LINC01287-203ENST00000454441 RRS1Q15050 365 aaKnown RBP16.55■□□□□ 0.24
LINC01287-203ENST00000454441 NSD3Q9BZ95 1437 aa16.54■□□□□ 0.24
LINC01287-203ENST00000454441 BTAF1O14981 1849 aa16.54■□□□□ 0.24
LINC01287-203ENST00000454441 C1QBPQ07021 282 aaKnown RBP16.53■□□□□ 0.24
LINC01287-203ENST00000454441 ACSBG1Q96GR2 724 aa16.53■□□□□ 0.24
LINC01287-203ENST00000454441 KCNQ2O43526 872 aa16.52■□□□□ 0.24
LINC01287-203ENST00000454441 POLR3GLQ9BT43 218 aa16.52■□□□□ 0.24
LINC01287-203ENST00000454441 SMG6Q86US8 1419 aaKnown RBP16.52■□□□□ 0.23
LINC01287-203ENST00000454441 SHANK3Q9BYB0 1731 aa16.51■□□□□ 0.23
LINC01287-203ENST00000454441 CARD14Q9BXL6 1004 aa16.51■□□□□ 0.23
LINC01287-203ENST00000454441 MAP2P11137 1827 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms