RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 NLRP6P59044 892 aa8.69□□□□□ -1.02
HLA-DPA3-207ENST00000454398 TOM1L2Q6ZVM7 507 aa8.69□□□□□ -1.02
HLA-DPA3-207ENST00000454398 MARCH10Q8NA82 808 aaPredicted RBP8.69□□□□□ -1.02
HLA-DPA3-207ENST00000454398 GOLGB1Q14789 3259 aaKnown RBP8.69□□□□□ -1.02
HLA-DPA3-207ENST00000454398 NHSQ6T4R5 1651 aa8.69□□□□□ -1.02
HLA-DPA3-207ENST00000454398 ZBTB7AO95365 584 aa8.68□□□□□ -1.02
HLA-DPA3-207ENST00000454398 NLRP13Q86W25 1043 aa8.68□□□□□ -1.02
HLA-DPA3-207ENST00000454398 PPP1R1BQ9UD71 204 aaPredicted RBP8.68□□□□□ -1.02
HLA-DPA3-207ENST00000454398 AATKQ6ZMQ8 1374 aa8.68□□□□□ -1.02
HLA-DPA3-207ENST00000454398 TNS2Q63HR2 1409 aa8.68□□□□□ -1.02
HLA-DPA3-207ENST00000454398 ROCK2O75116 1388 aaKnown RBP8.67□□□□□ -1.02
HLA-DPA3-207ENST00000454398 YY1P25490 414 aa8.67□□□□□ -1.02
HLA-DPA3-207ENST00000454398 L3MBTL2Q969R5 705 aa8.67□□□□□ -1.02
HLA-DPA3-207ENST00000454398 SIN3AQ96ST3 1273 aa8.67□□□□□ -1.02
HLA-DPA3-207ENST00000454398 CD163L1Q9NR16 1453 aa8.67□□□□□ -1.02
HLA-DPA3-207ENST00000454398 BTAF1O14981 1849 aa8.66□□□□□ -1.02
HLA-DPA3-207ENST00000454398 PAPPAQ13219 1627 aa8.66□□□□□ -1.02
HLA-DPA3-207ENST00000454398 ABCC6O95255 1503 aa8.66□□□□□ -1.02
HLA-DPA3-207ENST00000454398 WDR17Q8IZU2 1322 aa8.66□□□□□ -1.02
HLA-DPA3-207ENST00000454398 CSB-PGBD3P0DP91 1061 aa8.66□□□□□ -1.02
HLA-DPA3-207ENST00000454398 PTGER2P43116 358 aa8.66□□□□□ -1.02
HLA-DPA3-207ENST00000454398 DDB1Q16531 1140 aa8.66□□□□□ -1.02
HLA-DPA3-207ENST00000454398 NINLQ9Y2I6 1382 aa8.65□□□□□ -1.02
HLA-DPA3-207ENST00000454398 TTC21BQ7Z4L5 1316 aa8.65□□□□□ -1.02
HLA-DPA3-207ENST00000454398 KCNQ2O43526 872 aa8.65□□□□□ -1.02
HLA-DPA3-207ENST00000454398 NBPF14Q5TI25 921 aa8.65□□□□□ -1.02
HLA-DPA3-207ENST00000454398 ARHGEF25Q86VW2 580 aa8.65□□□□□ -1.02
HLA-DPA3-207ENST00000454398 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.65□□□□□ -1.02
HLA-DPA3-207ENST00000454398 STAC3Q96MF2 364 aa8.65□□□□□ -1.02
HLA-DPA3-207ENST00000454398 BCL11BQ9C0K0 894 aaPredicted RBP8.65□□□□□ -1.02
HLA-DPA3-207ENST00000454398 SPON1Q9HCB6 807 aa8.65□□□□□ -1.02
HLA-DPA3-207ENST00000454398 THRAP3Q9Y2W1 955 aaKnown RBP8.65□□□□□ -1.02
HLA-DPA3-207ENST00000454398 USP54Q70EL1 1684 aa8.65□□□□□ -1.03
HLA-DPA3-207ENST00000454398 KTN1Q86UP2 1357 aaKnown RBP8.64□□□□□ -1.03
HLA-DPA3-207ENST00000454398 TUBGCP6Q96RT7 1819 aa8.64□□□□□ -1.03
HLA-DPA3-207ENST00000454398 EVC2Q86UK5 1308 aa8.64□□□□□ -1.03
HLA-DPA3-207ENST00000454398 NEUROD1Q13562 356 aa8.64□□□□□ -1.03
HLA-DPA3-207ENST00000454398 ACSBG1Q96GR2 724 aa8.64□□□□□ -1.03
HLA-DPA3-207ENST00000454398 SGIP1Q9BQI5 828 aa8.64□□□□□ -1.03
HLA-DPA3-207ENST00000454398 BCL9O00512 1426 aa8.63□□□□□ -1.03
HLA-DPA3-207ENST00000454398 KAT6BQ8WYB5 2073 aa8.63□□□□□ -1.03
HLA-DPA3-207ENST00000454398 DOT1LQ8TEK3 1739 aa8.63□□□□□ -1.03
HLA-DPA3-207ENST00000454398 NME9Q86XW9 330 aa8.63□□□□□ -1.03
HLA-DPA3-207ENST00000454398 ATF5Q9Y2D1 282 aaPredicted RBP8.63□□□□□ -1.03
HLA-DPA3-207ENST00000454398 SBNO2Q9Y2G9 1366 aa8.62□□□□□ -1.03
HLA-DPA3-207ENST00000454398 RGPD2P0DJD1 1756 aa8.62□□□□□ -1.03
HLA-DPA3-207ENST00000454398 SHANK3Q9BYB0 1731 aa8.62□□□□□ -1.03
HLA-DPA3-207ENST00000454398 BRD4O60885 1362 aaPredicted RBP8.61□□□□□ -1.03
HLA-DPA3-207ENST00000454398 ERBB3P21860 1342 aa8.61□□□□□ -1.03
HLA-DPA3-207ENST00000454398 PLSCR1O15162 318 aa8.61□□□□□ -1.03
HLA-DPA3-207ENST00000454398 TXNRD1Q16881 649 aa8.61□□□□□ -1.03
HLA-DPA3-207ENST00000454398 ZNF827Q17R98 1081 aa8.61□□□□□ -1.03
HLA-DPA3-207ENST00000454398 A0A1W2PP64 1363 aa8.61□□□□□ -1.03
HLA-DPA3-207ENST00000454398 FAM208AQ9UK61 1670 aaKnown RBP8.6□□□□□ -1.03
HLA-DPA3-207ENST00000454398 FBLN1P23142 703 aa8.6□□□□□ -1.03
HLA-DPA3-207ENST00000454398 KCNQ4P56696 695 aa8.6□□□□□ -1.03
HLA-DPA3-207ENST00000454398 CARD10Q9BWT7 1032 aa8.6□□□□□ -1.03
HLA-DPA3-207ENST00000454398 FHDC1Q9C0D6 1143 aaPredicted RBP8.6□□□□□ -1.03
HLA-DPA3-207ENST00000454398 LRRC4BQ9NT99 713 aa8.6□□□□□ -1.03
HLA-DPA3-207ENST00000454398 NLRP2Q9NX02 1062 aa8.6□□□□□ -1.03
HLA-DPA3-207ENST00000454398 CCDC7Q96M83 1385 aa8.6□□□□□ -1.03
HLA-DPA3-207ENST00000454398 TTC21AQ8NDW8 1320 aa8.59□□□□□ -1.03
HLA-DPA3-207ENST00000454398 KLHL34Q8N239 644 aa8.59□□□□□ -1.03
HLA-DPA3-207ENST00000454398 TMC1Q8TDI8 760 aa8.59□□□□□ -1.03
HLA-DPA3-207ENST00000454398 STK32BQ9NY57 414 aa8.59□□□□□ -1.03
HLA-DPA3-207ENST00000454398 USP31Q70CQ4 1352 aa8.59□□□□□ -1.03
HLA-DPA3-207ENST00000454398 KCNH5Q8NCM2 988 aa8.58□□□□□ -1.04
HLA-DPA3-207ENST00000454398 ANKRD24Q8TF21 1146 aa8.58□□□□□ -1.04
HLA-DPA3-207ENST00000454398 LTV1Q96GA3 475 aaPredicted RBP8.58□□□□□ -1.04
HLA-DPA3-207ENST00000454398 MEGF6O75095 1541 aa8.58□□□□□ -1.04
HLA-DPA3-207ENST00000454398 NSD2O96028 1365 aa8.58□□□□□ -1.04
HLA-DPA3-207ENST00000454398 EDC4Q6P2E9 1401 aaKnown RBP8.57□□□□□ -1.04
HLA-DPA3-207ENST00000454398 SLC15A2Q16348 729 aa8.57□□□□□ -1.04
HLA-DPA3-207ENST00000454398 CHD4Q14839 1912 aa8.56□□□□□ -1.04
HLA-DPA3-207ENST00000454398 EXOC5O00471 708 aa8.56□□□□□ -1.04
HLA-DPA3-207ENST00000454398 ZNF784Q8NCA9 323 aaPredicted RBP8.56□□□□□ -1.04
HLA-DPA3-207ENST00000454398 SYT17Q9BSW7 474 aa8.56□□□□□ -1.04
HLA-DPA3-207ENST00000454398 CDCA7Q9BWT1 371 aaPredicted RBP8.56□□□□□ -1.04
HLA-DPA3-207ENST00000454398 CARD11Q9BXL7 1154 aa8.56□□□□□ -1.04
HLA-DPA3-207ENST00000454398 SLC12A5Q9H2X9 1139 aa8.56□□□□□ -1.04
HLA-DPA3-207ENST00000454398 CEP350Q5VT06 3117 aa8.55□□□□□ -1.04
HLA-DPA3-207ENST00000454398 C11orf95C9JLR9 678 aaPredicted RBP8.55□□□□□ -1.04
HLA-DPA3-207ENST00000454398 IL2RBP14784 551 aa8.55□□□□□ -1.04
HLA-DPA3-207ENST00000454398 IFFO2Q5TF58 517 aa8.55□□□□□ -1.04
HLA-DPA3-207ENST00000454398 SYTL4Q96C24 671 aaPredicted RBP8.55□□□□□ -1.04
HLA-DPA3-207ENST00000454398 MTFR1LQ9H019 292 aa8.55□□□□□ -1.04
HLA-DPA3-207ENST00000454398 LY75O60449 1722 aa8.54□□□□□ -1.04
HLA-DPA3-207ENST00000454398 COL24A1Q17RW2 1714 aa8.54□□□□□ -1.04
HLA-DPA3-207ENST00000454398 QSER1Q2KHR3 1735 aa8.54□□□□□ -1.04
HLA-DPA3-207ENST00000454398 TOGARAM1Q9Y4F4 1720 aa8.54□□□□□ -1.04
HLA-DPA3-207ENST00000454398 PELP1Q8IZL8 1130 aaKnown RBP8.54□□□□□ -1.04
HLA-DPA3-207ENST00000454398 USHBP1Q8N6Y0 703 aa8.54□□□□□ -1.04
HLA-DPA3-207ENST00000454398 DDX54Q8TDD1 881 aaKnown RBP8.54□□□□□ -1.04
HLA-DPA3-207ENST00000454398 AKT1S1Q96B36 256 aa8.54□□□□□ -1.04
HLA-DPA3-207ENST00000454398 KIF20BQ96Q89 1820 aa8.54□□□□□ -1.04
HLA-DPA3-207ENST00000454398 PNPLA7Q6ZV29 1317 aa8.54□□□□□ -1.04
HLA-DPA3-207ENST00000454398 C5P01031 1676 aa8.53□□□□□ -1.04
HLA-DPA3-207ENST00000454398 DCAF8L1A6NGE4 600 aa8.53□□□□□ -1.04
HLA-DPA3-207ENST00000454398 MSL1Q68DK7 614 aa8.53□□□□□ -1.04
HLA-DPA3-207ENST00000454398 AMIGO3Q86WK7 504 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms