RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 KCNH5Q8NCM2 988 aa26.29■■□□□ 1.8
UBE2D4-208ENST00000454350 LTN1O94822 1766 aa26.28■■□□□ 1.8
UBE2D4-208ENST00000454350 PDE3BQ13370 1112 aa26.28■■□□□ 1.8
UBE2D4-208ENST00000454350 TESK2Q96S53 571 aa26.28■■□□□ 1.8
UBE2D4-208ENST00000454350 LRP5O75197 1615 aa26.28■■□□□ 1.8
UBE2D4-208ENST00000454350 CAMKK2Q96RR4 588 aa26.27■■□□□ 1.8
UBE2D4-208ENST00000454350 SLC12A5Q9H2X9 1139 aa26.27■■□□□ 1.8
UBE2D4-208ENST00000454350 WDR17Q8IZU2 1322 aa26.27■■□□□ 1.8
UBE2D4-208ENST00000454350 ABCC6O95255 1503 aa26.27■■□□□ 1.8
UBE2D4-208ENST00000454350 PUS7Q96PZ0 661 aaKnown RBP26.26■■□□□ 1.79
UBE2D4-208ENST00000454350 EZH2Q15910 746 aaKnown RBP26.25■■□□□ 1.79
UBE2D4-208ENST00000454350 SOX12O15370 315 aa26.24■■□□□ 1.79
UBE2D4-208ENST00000454350 NME9Q86XW9 330 aa26.24■■□□□ 1.79
UBE2D4-208ENST00000454350 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.24■■□□□ 1.79
UBE2D4-208ENST00000454350 NUP188Q5SRE5 1749 aa26.24■■□□□ 1.79
UBE2D4-208ENST00000454350 A0A1W2PP64 1363 aa26.23■■□□□ 1.79
UBE2D4-208ENST00000454350 PSDA5PKW4 1024 aaPredicted RBP26.23■■□□□ 1.79
UBE2D4-208ENST00000454350 TOM1L2Q6ZVM7 507 aa26.23■■□□□ 1.79
UBE2D4-208ENST00000454350 EDC4Q6P2E9 1401 aaKnown RBP26.22■■□□□ 1.79
UBE2D4-208ENST00000454350 ST20-MTHFSA0A0A6YYL1 179 aa26.22■■□□□ 1.79
UBE2D4-208ENST00000454350 TMC1Q8TDI8 760 aa26.22■■□□□ 1.79
UBE2D4-208ENST00000454350 APBA3O96018 575 aa26.2■■□□□ 1.78
UBE2D4-208ENST00000454350 PARD3Q8TEW0 1356 aa26.2■■□□□ 1.78
UBE2D4-208ENST00000454350 CARD10Q9BWT7 1032 aa26.19■■□□□ 1.78
UBE2D4-208ENST00000454350 OVOS2A0A0J9YW53 1432 aa26.19■■□□□ 1.78
UBE2D4-208ENST00000454350 OVOS2Q6IE36 1432 aa26.19■■□□□ 1.78
UBE2D4-208ENST00000454350 OVOS2A0A0G2JMS6 1433 aa26.18■■□□□ 1.78
UBE2D4-208ENST00000454350 HDGFL2Q7Z4V5 671 aaPredicted RBP26.18■■□□□ 1.78
UBE2D4-208ENST00000454350 RGPD3A6NKT7 1758 aaPredicted RBP26.18■■□□□ 1.78
UBE2D4-208ENST00000454350 RGPD4Q7Z3J3 1758 aa26.18■■□□□ 1.78
UBE2D4-208ENST00000454350 DDB1Q16531 1140 aa26.16■■□□□ 1.78
UBE2D4-208ENST00000454350 R3HDM1Q15032 1099 aaKnown RBP26.15■■□□□ 1.78
UBE2D4-208ENST00000454350 TERF2IPQ9NYB0 399 aa26.15■■□□□ 1.78
UBE2D4-208ENST00000454350 NINLQ9Y2I6 1382 aa26.14■■□□□ 1.78
UBE2D4-208ENST00000454350 BCL9O00512 1426 aa26.14■■□□□ 1.77
UBE2D4-208ENST00000454350 C11orf95C9JLR9 678 aaPredicted RBP26.13■■□□□ 1.77
UBE2D4-208ENST00000454350 MARCH10Q8NA82 808 aaPredicted RBP26.13■■□□□ 1.77
UBE2D4-208ENST00000454350 CDCA7Q9BWT1 371 aaPredicted RBP26.13■■□□□ 1.77
UBE2D4-208ENST00000454350 ERBB3P21860 1342 aa26.12■■□□□ 1.77
UBE2D4-208ENST00000454350 CCDC7Q96M83 1385 aa26.11■■□□□ 1.77
UBE2D4-208ENST00000454350 CSB-PGBD3P0DP91 1061 aa26.11■■□□□ 1.77
UBE2D4-208ENST00000454350 PTF1AQ7RTS3 328 aa26.11■■□□□ 1.77
UBE2D4-208ENST00000454350 USP47Q96K76 1375 aa26.1■■□□□ 1.77
UBE2D4-208ENST00000454350 TNS2Q63HR2 1409 aa26.07■■□□□ 1.76
UBE2D4-208ENST00000454350 SLC24A1O60721 1099 aa26.07■■□□□ 1.76
UBE2D4-208ENST00000454350 ANKRD36BQ8N2N9 1353 aa26.06■■□□□ 1.76
UBE2D4-208ENST00000454350 FAM208AQ9UK61 1670 aaKnown RBP26.06■■□□□ 1.76
UBE2D4-208ENST00000454350 BCL11BQ9C0K0 894 aaPredicted RBP26.05■■□□□ 1.76
UBE2D4-208ENST00000454350 RGPD2P0DJD1 1756 aa26.05■■□□□ 1.76
UBE2D4-208ENST00000454350 PLSCR1O15162 318 aa26.04■■□□□ 1.76
UBE2D4-208ENST00000454350 MYOM1P52179 1685 aa26.03■■□□□ 1.76
UBE2D4-208ENST00000454350 ANKRD24Q8TF21 1146 aa26.03■■□□□ 1.76
UBE2D4-208ENST00000454350 NHSQ6T4R5 1651 aa26.03■■□□□ 1.76
UBE2D4-208ENST00000454350 EXOC5O00471 708 aa26.02■■□□□ 1.76
UBE2D4-208ENST00000454350 IP6K1Q92551 441 aa26.01■■□□□ 1.75
UBE2D4-208ENST00000454350 NLRP2Q9NX02 1062 aa26.01■■□□□ 1.75
UBE2D4-208ENST00000454350 FBLN1P23142 703 aa26■■□□□ 1.75
UBE2D4-208ENST00000454350 TMF1P82094 1093 aa26■■□□□ 1.75
UBE2D4-208ENST00000454350 KAT6BQ8WYB5 2073 aa26■■□□□ 1.75
UBE2D4-208ENST00000454350 KIF20BQ96Q89 1820 aa26■■□□□ 1.75
UBE2D4-208ENST00000454350 PROM2Q8N271 834 aa25.99■■□□□ 1.75
UBE2D4-208ENST00000454350 TIMELESSQ9UNS1 1208 aa25.99■■□□□ 1.75
UBE2D4-208ENST00000454350 MAP3K19Q56UN5 1328 aa25.98■■□□□ 1.75
UBE2D4-208ENST00000454350 CLSPNQ9HAW4 1339 aa25.98■■□□□ 1.75
UBE2D4-208ENST00000454350 COG3Q96JB2 828 aa25.97■■□□□ 1.75
UBE2D4-208ENST00000454350 FYB1O15117 783 aa25.96■■□□□ 1.75
UBE2D4-208ENST00000454350 IL2RBP14784 551 aa25.96■■□□□ 1.75
UBE2D4-208ENST00000454350 NBPF14Q5TI25 921 aa25.96■■□□□ 1.75
UBE2D4-208ENST00000454350 CASZ1Q86V15 1759 aa25.96■■□□□ 1.75
UBE2D4-208ENST00000454350 BTAF1O14981 1849 aa25.95■■□□□ 1.75
UBE2D4-208ENST00000454350 SHANK3Q9BYB0 1731 aa25.95■■□□□ 1.74
UBE2D4-208ENST00000454350 KCNQ2O43526 872 aa25.95■■□□□ 1.74
UBE2D4-208ENST00000454350 HOXC9P31274 260 aa25.94■■□□□ 1.74
UBE2D4-208ENST00000454350 ANO8Q9HCE9 1232 aaPredicted RBP25.94■■□□□ 1.74
UBE2D4-208ENST00000454350 PCGF6Q9BYE7 350 aa25.92■■□□□ 1.74
UBE2D4-208ENST00000454350 GGNBP2Q9H3C7 697 aa25.91■■□□□ 1.74
UBE2D4-208ENST00000454350 LTV1Q96GA3 475 aaPredicted RBP25.9■■□□□ 1.74
UBE2D4-208ENST00000454350 CARD14Q9BXL6 1004 aa25.9■■□□□ 1.74
UBE2D4-208ENST00000454350 RTL1A6NKG5 1358 aa25.88■■□□□ 1.73
UBE2D4-208ENST00000454350 TXNRD1Q16881 649 aa25.88■■□□□ 1.73
UBE2D4-208ENST00000454350 CDCA8Q53HL2 280 aa25.88■■□□□ 1.73
UBE2D4-208ENST00000454350 RRS1Q15050 365 aaKnown RBP25.87■■□□□ 1.73
UBE2D4-208ENST00000454350 ACSBG1Q96GR2 724 aa25.87■■□□□ 1.73
UBE2D4-208ENST00000454350 PAPPAQ13219 1627 aa25.87■■□□□ 1.73
UBE2D4-208ENST00000454350 AMPHP49418 695 aa25.86■■□□□ 1.73
UBE2D4-208ENST00000454350 PDGFDQ9GZP0 370 aaPredicted RBP25.85■■□□□ 1.73
UBE2D4-208ENST00000454350 MEGF6O75095 1541 aa25.84■■□□□ 1.73
UBE2D4-208ENST00000454350 DOT1LQ8TEK3 1739 aa25.83■■□□□ 1.73
UBE2D4-208ENST00000454350 ANKRD26Q9UPS8 1709 aa25.83■■□□□ 1.73
UBE2D4-208ENST00000454350 MAP2P11137 1827 aaKnown RBP25.81■■□□□ 1.72
UBE2D4-208ENST00000454350 NSD3Q9BZ95 1437 aa25.81■■□□□ 1.72
UBE2D4-208ENST00000454350 NBPF6Q5VWK0 638 aa25.81■■□□□ 1.72
UBE2D4-208ENST00000454350 NBPF4Q96M43 638 aa25.81■■□□□ 1.72
UBE2D4-208ENST00000454350 SPON1Q9HCB6 807 aa25.8■■□□□ 1.72
UBE2D4-208ENST00000454350 DDX54Q8TDD1 881 aaKnown RBP25.79■■□□□ 1.72
UBE2D4-208ENST00000454350 INSRP06213 1382 aa25.79■■□□□ 1.72
UBE2D4-208ENST00000454350 HSP90AB2PQ58FF8 381 aa25.78■■□□□ 1.72
UBE2D4-208ENST00000454350 KIF24Q5T7B8 1368 aa25.78■■□□□ 1.72
UBE2D4-208ENST00000454350 LY75O60449 1722 aa25.77■■□□□ 1.72
UBE2D4-208ENST00000454350 SLC15A2Q16348 729 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms