RNA–Protein interactions for RNA: ENST00000454000.6

NBPF3-205, Transcript of NBPF member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NBPF3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-205ENST00000454000 SMG6Q86US8 1419 aaKnown RBP19.23■□□□□ 0.67
NBPF3-205ENST00000454000 CPDO75976 1380 aa19.23■□□□□ 0.67
NBPF3-205ENST00000454000 FLT4P35916 1363 aa19.23■□□□□ 0.67
NBPF3-205ENST00000454000 SPATA31A6Q5VVP1 1343 aa19.22■□□□□ 0.67
NBPF3-205ENST00000454000 CDK12Q9NYV4 1490 aaPredicted RBP19.21■□□□□ 0.67
NBPF3-205ENST00000454000 DIAPH1O60610 1272 aaKnown RBP19.19■□□□□ 0.66
NBPF3-205ENST00000454000 RTL1A6NKG5 1358 aa19.19■□□□□ 0.66
NBPF3-205ENST00000454000 EIF4A2Q14240 407 aaKnown RBP19.19■□□□□ 0.66
NBPF3-205ENST00000454000 KIF24Q5T7B8 1368 aa19.18■□□□□ 0.66
NBPF3-205ENST00000454000 LRP6O75581 1613 aa19.18■□□□□ 0.66
NBPF3-205ENST00000454000 INSRP06213 1382 aa19.18■□□□□ 0.66
NBPF3-205ENST00000454000 FAM9BQ8IZU0 186 aa19.18■□□□□ 0.66
NBPF3-205ENST00000454000 C8orf37Q96NL8 207 aa19.18■□□□□ 0.66
NBPF3-205ENST00000454000 RGPD5Q99666 1765 aa19.17■□□□□ 0.66
NBPF3-205ENST00000454000 U2SURPO15042 1029 aaKnown RBP19.17■□□□□ 0.66
NBPF3-205ENST00000454000 MEX3CQ5U5Q3 659 aaKnown RBP19.17■□□□□ 0.66
NBPF3-205ENST00000454000 BTG4Q9NY30 223 aa19.17■□□□□ 0.66
NBPF3-205ENST00000454000 COL3A1P02461 1466 aaPredicted RBP19.17■□□□□ 0.66
NBPF3-205ENST00000454000 IL13P35225 146 aa19.16■□□□□ 0.66
NBPF3-205ENST00000454000 ANKRD24Q8TF21 1146 aa19.16■□□□□ 0.66
NBPF3-205ENST00000454000 COL18A1P39060 1754 aa19.16■□□□□ 0.66
NBPF3-205ENST00000454000 PNISRQ8TF01 805 aaKnown RBP19.16■□□□□ 0.66
NBPF3-205ENST00000454000 STRN4Q9NRL3 753 aa19.16■□□□□ 0.66
NBPF3-205ENST00000454000 NGLY1Q96IV0 654 aa19.15■□□□□ 0.66
NBPF3-205ENST00000454000 CAMTA1Q9Y6Y1 1673 aa19.15■□□□□ 0.66
NBPF3-205ENST00000454000 WDR43Q15061 677 aaKnown RBP eCLIP19.15■□□□□ 0.66
NBPF3-205ENST00000454000 NUDCQ9Y266 331 aa19.15■□□□□ 0.66
NBPF3-205ENST00000454000 BLMP54132 1417 aaPredicted RBP19.14■□□□□ 0.66
NBPF3-205ENST00000454000 CSB-PGBD3P0DP91 1061 aa19.14■□□□□ 0.65
NBPF3-205ENST00000454000 EVA1CP58658 441 aa19.14■□□□□ 0.65
NBPF3-205ENST00000454000 U2AF1L5P0DN76 240 aaPredicted RBP19.13■□□□□ 0.65
NBPF3-205ENST00000454000 U2AF1Q01081 240 aaKnown RBP eCLIP19.13■□□□□ 0.65
NBPF3-205ENST00000454000 ERBB3P21860 1342 aa19.13■□□□□ 0.65
NBPF3-205ENST00000454000 LMO7Q8WWI1 1683 aa19.12■□□□□ 0.65
NBPF3-205ENST00000454000 ADAMTS8Q9UP79 889 aa19.12■□□□□ 0.65
NBPF3-205ENST00000454000 COL14A1Q05707 1796 aaKnown RBP19.12■□□□□ 0.65
NBPF3-205ENST00000454000 EYA1Q99502 592 aa19.12■□□□□ 0.65
NBPF3-205ENST00000454000 HMOX1P09601 288 aa19.11■□□□□ 0.65
NBPF3-205ENST00000454000 USHBP1Q8N6Y0 703 aa19.11■□□□□ 0.65
NBPF3-205ENST00000454000 NBPF6Q5VWK0 638 aa19.1■□□□□ 0.65
NBPF3-205ENST00000454000 ILDR1Q86SU0 546 aaPredicted RBP19.1■□□□□ 0.65
NBPF3-205ENST00000454000 NBPF4Q96M43 638 aa19.1■□□□□ 0.65
NBPF3-205ENST00000454000 NLRP2Q9NX02 1062 aa19.1■□□□□ 0.65
NBPF3-205ENST00000454000 LARP1Q6PKG0 1096 aaKnown RBP19.1■□□□□ 0.65
NBPF3-205ENST00000454000 COL5A2P05997 1499 aaPredicted RBP19.1■□□□□ 0.65
NBPF3-205ENST00000454000 ABCC6O95255 1503 aa19.09■□□□□ 0.65
NBPF3-205ENST00000454000 SULT6B1Q6IMI4 303 aa19.09■□□□□ 0.65
NBPF3-205ENST00000454000 TOM1L2Q6ZVM7 507 aa19.09■□□□□ 0.65
NBPF3-205ENST00000454000 AEBP1Q8IUX7 1158 aa19.09■□□□□ 0.65
NBPF3-205ENST00000454000 PLCH1Q4KWH8 1693 aa19.08■□□□□ 0.65
NBPF3-205ENST00000454000 WDR17Q8IZU2 1322 aa19.08■□□□□ 0.64
NBPF3-205ENST00000454000 USP35Q9P2H5 1018 aa19.07■□□□□ 0.64
NBPF3-205ENST00000454000 RGPD2P0DJD1 1756 aa19.07■□□□□ 0.64
NBPF3-205ENST00000454000 SLIT2O94813 1529 aa19.06■□□□□ 0.64
NBPF3-205ENST00000454000 SENP3-EIF4A1A0A087X0R7 540 aa19.06■□□□□ 0.64
NBPF3-205ENST00000454000 CCDC146Q8IYE0 955 aa19.06■□□□□ 0.64
NBPF3-205ENST00000454000 FNBP4Q8N3X1 1017 aaPredicted RBP19.06■□□□□ 0.64
NBPF3-205ENST00000454000 IGSF1Q8N6C5 1336 aa19.06■□□□□ 0.64
NBPF3-205ENST00000454000 USP21Q9UK80 565 aa19.06■□□□□ 0.64
NBPF3-205ENST00000454000 AFF2P51816 1311 aa19.05■□□□□ 0.64
NBPF3-205ENST00000454000 UNC5CLQ8IV45 518 aa19.05■□□□□ 0.64
NBPF3-205ENST00000454000 CCDC9Q9Y3X0 531 aaKnown RBP19.04■□□□□ 0.64
NBPF3-205ENST00000454000 BCL9LQ86UU0 1499 aa19.03■□□□□ 0.64
NBPF3-205ENST00000454000 RGPD1P0DJD0 1748 aa19.03■□□□□ 0.64
NBPF3-205ENST00000454000 PRKAR2BP31323 418 aa19.03■□□□□ 0.64
NBPF3-205ENST00000454000 RSPH6AQ9H0K4 717 aa19.03■□□□□ 0.64
NBPF3-205ENST00000454000 FCHSD2O94868 740 aa19.02■□□□□ 0.64
NBPF3-205ENST00000454000 NWD2Q9ULI1 1742 aa19.02■□□□□ 0.63
NBPF3-205ENST00000454000 CARD10Q9BWT7 1032 aa19.01■□□□□ 0.63
NBPF3-205ENST00000454000 NRAPQ86VF7 1730 aa19.01■□□□□ 0.63
NBPF3-205ENST00000454000 CRB1P82279 1406 aa19.01■□□□□ 0.63
NBPF3-205ENST00000454000 PHACTR3Q96KR7 559 aa18.99■□□□□ 0.63
NBPF3-205ENST00000454000 PLEKHF1Q96S99 279 aa18.99■□□□□ 0.63
NBPF3-205ENST00000454000 KDRP35968 1356 aa18.99■□□□□ 0.63
NBPF3-205ENST00000454000 YTHDC1Q96MU7 727 aaKnown RBP18.98■□□□□ 0.63
NBPF3-205ENST00000454000 FAM208AQ9UK61 1670 aaKnown RBP18.98■□□□□ 0.63
NBPF3-205ENST00000454000 VPS72Q15906 364 aa18.98■□□□□ 0.63
NBPF3-205ENST00000454000 RUNDC1Q96C34 613 aa18.98■□□□□ 0.63
NBPF3-205ENST00000454000 SPATA31A1Q5TZJ5 1347 aa18.97■□□□□ 0.63
NBPF3-205ENST00000454000 SPATA31A5Q5VU36 1347 aa18.97■□□□□ 0.63
NBPF3-205ENST00000454000 SPATA31A7Q8IWB4 1347 aa18.97■□□□□ 0.63
NBPF3-205ENST00000454000 RAPGEF4Q8WZA2 1011 aa18.97■□□□□ 0.63
NBPF3-205ENST00000454000 PNNQ9H307 717 aaKnown RBP18.97■□□□□ 0.63
NBPF3-205ENST00000454000 NCAPD2Q15021 1401 aa18.96■□□□□ 0.63
NBPF3-205ENST00000454000 MAPK8IP3Q9UPT6 1336 aa18.96■□□□□ 0.63
NBPF3-205ENST00000454000 TCP11L2Q8N4U5 519 aa18.96■□□□□ 0.63
NBPF3-205ENST00000454000 SALL2Q9Y467 1007 aaPredicted RBP18.96■□□□□ 0.63
NBPF3-205ENST00000454000 APAF1O14727 1248 aa18.95■□□□□ 0.62
NBPF3-205ENST00000454000 NEFMP07197 916 aa18.95■□□□□ 0.62
NBPF3-205ENST00000454000 QTRT2Q9H974 415 aaKnown RBP18.95■□□□□ 0.62
NBPF3-205ENST00000454000 NEUROD2Q15784 382 aa18.95■□□□□ 0.62
NBPF3-205ENST00000454000 RRP7AQ9Y3A4 280 aaKnown RBP18.95■□□□□ 0.62
NBPF3-205ENST00000454000 TATP17735 454 aaPredicted RBP18.94■□□□□ 0.62
NBPF3-205ENST00000454000 TRPC5Q9UL62 973 aaPredicted RBP18.94■□□□□ 0.62
NBPF3-205ENST00000454000 MEGF6O75095 1541 aa18.94■□□□□ 0.62
NBPF3-205ENST00000454000 IL2RBP14784 551 aa18.94■□□□□ 0.62
NBPF3-205ENST00000454000 HNRNPUQ00839 825 aaKnown RBP eCLIP18.92■□□□□ 0.62
NBPF3-205ENST00000454000 FAM98CQ17RN3 349 aaKnown RBP18.92■□□□□ 0.62
NBPF3-205ENST00000454000 GJD4Q96KN9 370 aaPredicted RBP18.92■□□□□ 0.62
NBPF3-205ENST00000454000 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms