RNA–Protein interactions for RNA: ENST00000453257.1

TRGVB-201, Transcript of T cell receptor gamma variable B (pseudogene), humanhuman

BASIC

Gene TRGVB, Length 471 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRGVB-201ENST00000453257 ARID5BQ14865 1188 aa7.24□□□□□ -1.25
TRGVB-201ENST00000453257 OXLD1Q5BKU9 147 aa7.24□□□□□ -1.25
TRGVB-201ENST00000453257 EHBP1Q8NDI1 1231 aa7.24□□□□□ -1.25
TRGVB-201ENST00000453257 DOLKQ9UPQ8 538 aa7.24□□□□□ -1.25
TRGVB-201ENST00000453257 GIGYF1O75420 1035 aaPredicted RBP7.23□□□□□ -1.25
TRGVB-201ENST00000453257 PDE4CQ08493 712 aa7.23□□□□□ -1.25
TRGVB-201ENST00000453257 EML3Q32P44 896 aa7.23□□□□□ -1.25
TRGVB-201ENST00000453257 RNF20Q5VTR2 975 aa7.23□□□□□ -1.25
TRGVB-201ENST00000453257 VARSP26640 1264 aaKnown RBP7.22□□□□□ -1.25
TRGVB-201ENST00000453257 RPIAP49247 311 aa7.22□□□□□ -1.25
TRGVB-201ENST00000453257 WNT7BP56706 349 aa7.22□□□□□ -1.25
TRGVB-201ENST00000453257 VASH1Q7L8A9 365 aaPredicted RBP7.22□□□□□ -1.25
TRGVB-201ENST00000453257 AEBP1Q8IUX7 1158 aa7.22□□□□□ -1.25
TRGVB-201ENST00000453257 MKRN1Q9UHC7 482 aaKnown RBP7.22□□□□□ -1.25
TRGVB-201ENST00000453257 CDV3Q9UKY7 258 aaKnown RBP7.22□□□□□ -1.25
TRGVB-201ENST00000453257 RASA1P20936 1047 aa7.21□□□□□ -1.26
TRGVB-201ENST00000453257 MAP7D1Q3KQU3 841 aa7.21□□□□□ -1.26
TRGVB-201ENST00000453257 LARP1Q6PKG0 1096 aaKnown RBP7.21□□□□□ -1.26
TRGVB-201ENST00000453257 ESF1Q9H501 851 aaKnown RBP7.21□□□□□ -1.26
TRGVB-201ENST00000453257 PCDHB11Q9Y5F2 797 aa7.21□□□□□ -1.26
TRGVB-201ENST00000453257 ZBTB7CA1YPR0 619 aa7.2□□□□□ -1.26
TRGVB-201ENST00000453257 SKOR1P84550 965 aa7.2□□□□□ -1.26
TRGVB-201ENST00000453257 PSME1Q06323 249 aa7.2□□□□□ -1.26
TRGVB-201ENST00000453257 RC3H1Q5TC82 1133 aaKnown RBP7.2□□□□□ -1.26
TRGVB-201ENST00000453257 PLEKHM2Q8IWE5 1019 aa7.2□□□□□ -1.26
TRGVB-201ENST00000453257 KCTD15Q96SI1 283 aaPredicted RBP7.2□□□□□ -1.26
TRGVB-201ENST00000453257 C1QTNF2Q9BXJ5 285 aa7.2□□□□□ -1.26
TRGVB-201ENST00000453257 ATP5J2-PTCD1G3V325 749 aa7.19□□□□□ -1.26
TRGVB-201ENST00000453257 ATG7O95352 703 aa7.19□□□□□ -1.26
TRGVB-201ENST00000453257 TRIM26Q12899 539 aaPredicted RBP7.19□□□□□ -1.26
TRGVB-201ENST00000453257 KANK4Q5T7N3 995 aaPredicted RBP7.19□□□□□ -1.26
TRGVB-201ENST00000453257 PHTF2Q8N3S3 785 aa7.19□□□□□ -1.26
TRGVB-201ENST00000453257 CCDC85AQ96PX6 553 aaPredicted RBP7.19□□□□□ -1.26
TRGVB-201ENST00000453257 TRAIPQ9BWF2 469 aa7.19□□□□□ -1.26
TRGVB-201ENST00000453257 NOD1Q9Y239 953 aa7.19□□□□□ -1.26
TRGVB-201ENST00000453257 RBM19Q9Y4C8 960 aaKnown RBP7.19□□□□□ -1.26
TRGVB-201ENST00000453257 CARNS1A5YM72 827 aa7.18□□□□□ -1.26
TRGVB-201ENST00000453257 LZTS3O60299 673 aaPredicted RBP7.18□□□□□ -1.26
TRGVB-201ENST00000453257 FSHRP23945 695 aa7.18□□□□□ -1.26
TRGVB-201ENST00000453257 SLC19A1P41440 591 aa7.18□□□□□ -1.26
TRGVB-201ENST00000453257 SRPK2P78362 688 aaKnown RBP7.18□□□□□ -1.26
TRGVB-201ENST00000453257 TSGA10IPQ3SY00 556 aa7.18□□□□□ -1.26
TRGVB-201ENST00000453257 LIAT1Q6ZQX7 453 aa7.18□□□□□ -1.26
TRGVB-201ENST00000453257 TRIM50Q86XT4 487 aa7.18□□□□□ -1.26
TRGVB-201ENST00000453257 TRMT44Q8IYL2 757 aaKnown RBP7.18□□□□□ -1.26
TRGVB-201ENST00000453257 ZNF594Q96JF6 807 aaPredicted RBP7.18□□□□□ -1.26
TRGVB-201ENST00000453257 PLA2G2EQ9NZK7 142 aa7.18□□□□□ -1.26
TRGVB-201ENST00000453257 NOVA2Q9UNW9 492 aaKnown RBP7.18□□□□□ -1.26
TRGVB-201ENST00000453257 USTQ9Y2C2 406 aa7.18□□□□□ -1.26
TRGVB-201ENST00000453257 USP17L15C9J2P7 530 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 USP17L10C9JJH3 530 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 USP17L13C9JLJ4 530 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 USP17L12C9JPN9 530 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 USP17L11C9JVI0 530 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 USP17L21D6R901 530 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 USP17L18D6R9N7 530 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 USP17L22D6RA61 530 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 USP17L17D6RBQ6 530 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 USP17L19D6RCP7 530 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 USP17L20D6RJB6 530 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 ATP1A2P50993 1020 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 USP17L24Q0WX57 530 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 SEPT12Q8IYM1 358 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 OGFOD1Q8N543 542 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 KCTD17Q8N5Z5 321 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 SIRT1Q96EB6 747 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 PODXL2Q9NZ53 605 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 TLL2Q9Y6L7 1015 aa7.17□□□□□ -1.26
TRGVB-201ENST00000453257 MYCP01106 439 aaPredicted RBP7.16□□□□□ -1.26
TRGVB-201ENST00000453257 USP4Q13107 963 aa7.16□□□□□ -1.26
TRGVB-201ENST00000453257 CRTC2Q53ET0 693 aaPredicted RBP7.16□□□□□ -1.26
TRGVB-201ENST00000453257 TRAF7Q6Q0C0 670 aa7.16□□□□□ -1.26
TRGVB-201ENST00000453257 CDCA7Q9BWT1 371 aaPredicted RBP7.16□□□□□ -1.26
TRGVB-201ENST00000453257 DNAAF2Q9NVR5 837 aaKnown RBP7.16□□□□□ -1.26
TRGVB-201ENST00000453257 FAM196BA6NMK8 535 aa7.15□□□□□ -1.26
TRGVB-201ENST00000453257 ESPNB1AK53 854 aa7.15□□□□□ -1.26
TRGVB-201ENST00000453257 GTF2IP78347 998 aa7.15□□□□□ -1.26
TRGVB-201ENST00000453257 FOXC1Q12948 553 aa7.15□□□□□ -1.26
TRGVB-201ENST00000453257 INTS6LQ5JSJ4 861 aaKnown RBP7.15□□□□□ -1.26
TRGVB-201ENST00000453257 FAM200AQ8TCP9 573 aa7.15□□□□□ -1.26
TRGVB-201ENST00000453257 STK32AQ8WU08 396 aa7.15□□□□□ -1.26
TRGVB-201ENST00000453257 ZNF697Q5TEC3 545 aa7.14□□□□□ -1.27
TRGVB-201ENST00000453257 TMEM164Q5U3C3 297 aa7.14□□□□□ -1.27
TRGVB-201ENST00000453257 CHIC2Q9UKJ5 165 aa7.14□□□□□ -1.27
TRGVB-201ENST00000453257 MAP4K5Q9Y4K4 846 aa7.14□□□□□ -1.27
TRGVB-201ENST00000453257 ERVH48-1M5A8F1 160 aa7.13□□□□□ -1.27
TRGVB-201ENST00000453257 CLDN10P78369 228 aa7.13□□□□□ -1.27
TRGVB-201ENST00000453257 DHX9Q08211 1270 aaKnown RBP7.13□□□□□ -1.27
TRGVB-201ENST00000453257 DPYDQ12882 1025 aa7.13□□□□□ -1.27
TRGVB-201ENST00000453257 PTK7Q13308 1070 aa7.13□□□□□ -1.27
TRGVB-201ENST00000453257 CCDC125Q86Z20 511 aa7.13□□□□□ -1.27
TRGVB-201ENST00000453257 ANKMY2Q8IV38 441 aa7.13□□□□□ -1.27
TRGVB-201ENST00000453257 TRIM52Q96A61 297 aa7.13□□□□□ -1.27
TRGVB-201ENST00000453257 MRGPRX2Q96LB1 330 aa7.13□□□□□ -1.27
TRGVB-201ENST00000453257 CYLDQ9NQC7 956 aa7.13□□□□□ -1.27
TRGVB-201ENST00000453257 ZMIZ1Q9ULJ6 1067 aa7.13□□□□□ -1.27
TRGVB-201ENST00000453257 WNT7AO00755 349 aa7.12□□□□□ -1.27
TRGVB-201ENST00000453257 ALDH1A1P00352 501 aa7.12□□□□□ -1.27
TRGVB-201ENST00000453257 ELOAQ14241 798 aaKnown RBP7.12□□□□□ -1.27
TRGVB-201ENST00000453257 SPRYD7Q5W111 196 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms