RNA–Protein interactions for RNA: ENST00000452977.5

CTDSP1-205, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-205ENST00000452977 USP31Q70CQ4 1352 aa21.79■■□□□ 1.08
CTDSP1-205ENST00000452977 TRIM37O94972 964 aa21.79■■□□□ 1.08
CTDSP1-205ENST00000452977 EDC4Q6P2E9 1401 aaKnown RBP21.79■■□□□ 1.08
CTDSP1-205ENST00000452977 CSB-PGBD3P0DP91 1061 aa21.78■■□□□ 1.08
CTDSP1-205ENST00000452977 COL18A1P39060 1754 aa21.77■■□□□ 1.08
CTDSP1-205ENST00000452977 SOX12O15370 315 aa21.77■■□□□ 1.08
CTDSP1-205ENST00000452977 APBA3O96018 575 aa21.77■■□□□ 1.08
CTDSP1-205ENST00000452977 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.77■■□□□ 1.08
CTDSP1-205ENST00000452977 OVOS2A0A0G2JMS6 1433 aa21.77■■□□□ 1.08
CTDSP1-205ENST00000452977 OVOS2A0A0J9YW53 1432 aa21.77■■□□□ 1.08
CTDSP1-205ENST00000452977 OVOS2Q6IE36 1432 aa21.77■■□□□ 1.08
CTDSP1-205ENST00000452977 SRCAPQ6ZRS2 3230 aa21.76■■□□□ 1.07
CTDSP1-205ENST00000452977 USP54Q70EL1 1684 aa21.76■■□□□ 1.07
CTDSP1-205ENST00000452977 DDB1Q16531 1140 aa21.76■■□□□ 1.07
CTDSP1-205ENST00000452977 NFAT5O94916 1531 aa21.75■■□□□ 1.07
CTDSP1-205ENST00000452977 CARD10Q9BWT7 1032 aa21.75■■□□□ 1.07
CTDSP1-205ENST00000452977 CD163L1Q9NR16 1453 aa21.75■■□□□ 1.07
CTDSP1-205ENST00000452977 CCDC7Q96M83 1385 aa21.74■■□□□ 1.07
CTDSP1-205ENST00000452977 SLC12A5Q9H2X9 1139 aa21.74■■□□□ 1.07
CTDSP1-205ENST00000452977 AXIN2Q9Y2T1 843 aa21.74■■□□□ 1.07
CTDSP1-205ENST00000452977 ST20-MTHFSA0A0A6YYL1 179 aa21.73■■□□□ 1.07
CTDSP1-205ENST00000452977 EZH2Q15910 746 aaKnown RBP21.72■■□□□ 1.07
CTDSP1-205ENST00000452977 CAMKK2Q96RR4 588 aa21.72■■□□□ 1.07
CTDSP1-205ENST00000452977 TIMELESSQ9UNS1 1208 aa21.72■■□□□ 1.07
CTDSP1-205ENST00000452977 A0A1W2PP64 1363 aa21.72■■□□□ 1.07
CTDSP1-205ENST00000452977 LRRC37A3O60309 1634 aa21.71■■□□□ 1.07
CTDSP1-205ENST00000452977 LRP5O75197 1615 aa21.71■■□□□ 1.07
CTDSP1-205ENST00000452977 NME9Q86XW9 330 aa21.71■■□□□ 1.07
CTDSP1-205ENST00000452977 TESK2Q96S53 571 aa21.71■■□□□ 1.07
CTDSP1-205ENST00000452977 CLSPNQ9HAW4 1339 aa21.71■■□□□ 1.07
CTDSP1-205ENST00000452977 TMF1P82094 1093 aa21.7■■□□□ 1.06
CTDSP1-205ENST00000452977 WNK3Q9BYP7 1800 aa21.69■■□□□ 1.06
CTDSP1-205ENST00000452977 PSDA5PKW4 1024 aaPredicted RBP21.69■■□□□ 1.06
CTDSP1-205ENST00000452977 CDCA8Q53HL2 280 aa21.69■■□□□ 1.06
CTDSP1-205ENST00000452977 NBPF14Q5TI25 921 aa21.69■■□□□ 1.06
CTDSP1-205ENST00000452977 BCL9O00512 1426 aa21.67■■□□□ 1.06
CTDSP1-205ENST00000452977 USP47Q96K76 1375 aa21.67■■□□□ 1.06
CTDSP1-205ENST00000452977 RGPD5Q99666 1765 aa21.66■■□□□ 1.06
CTDSP1-205ENST00000452977 ERBB3P21860 1342 aa21.66■■□□□ 1.06
CTDSP1-205ENST00000452977 EXOC5O00471 708 aa21.66■■□□□ 1.06
CTDSP1-205ENST00000452977 R3HDM1Q15032 1099 aaKnown RBP21.66■■□□□ 1.06
CTDSP1-205ENST00000452977 ANKRD36BQ8N2N9 1353 aa21.65■■□□□ 1.06
CTDSP1-205ENST00000452977 COG3Q96JB2 828 aa21.65■■□□□ 1.06
CTDSP1-205ENST00000452977 PEAK1Q9H792 1746 aa21.65■■□□□ 1.06
CTDSP1-205ENST00000452977 LTN1O94822 1766 aa21.64■■□□□ 1.06
CTDSP1-205ENST00000452977 RREB1Q92766 1687 aa21.64■■□□□ 1.05
CTDSP1-205ENST00000452977 BCL11BQ9C0K0 894 aaPredicted RBP21.64■■□□□ 1.05
CTDSP1-205ENST00000452977 PLSCR1O15162 318 aa21.63■■□□□ 1.05
CTDSP1-205ENST00000452977 NLRP2Q9NX02 1062 aa21.63■■□□□ 1.05
CTDSP1-205ENST00000452977 RGPD3A6NKT7 1758 aaPredicted RBP21.63■■□□□ 1.05
CTDSP1-205ENST00000452977 RGPD4Q7Z3J3 1758 aa21.63■■□□□ 1.05
CTDSP1-205ENST00000452977 TNS2Q63HR2 1409 aa21.63■■□□□ 1.05
CTDSP1-205ENST00000452977 ANKRD24Q8TF21 1146 aa21.61■■□□□ 1.05
CTDSP1-205ENST00000452977 IL2RBP14784 551 aa21.6■■□□□ 1.05
CTDSP1-205ENST00000452977 MARCH10Q8NA82 808 aaPredicted RBP21.6■■□□□ 1.05
CTDSP1-205ENST00000452977 SBF2Q86WG5 1849 aa21.59■■□□□ 1.05
CTDSP1-205ENST00000452977 NUP188Q5SRE5 1749 aa21.59■■□□□ 1.05
CTDSP1-205ENST00000452977 IP6K1Q92551 441 aa21.59■■□□□ 1.05
CTDSP1-205ENST00000452977 FAM208AQ9UK61 1670 aaKnown RBP21.58■■□□□ 1.05
CTDSP1-205ENST00000452977 AMPHP49418 695 aa21.55■■□□□ 1.04
CTDSP1-205ENST00000452977 PCGF6Q9BYE7 350 aa21.55■■□□□ 1.04
CTDSP1-205ENST00000452977 RTL1A6NKG5 1358 aa21.55■■□□□ 1.04
CTDSP1-205ENST00000452977 MAP3K19Q56UN5 1328 aa21.52■■□□□ 1.03
CTDSP1-205ENST00000452977 HOXC9P31274 260 aa21.51■■□□□ 1.03
CTDSP1-205ENST00000452977 SMG6Q86US8 1419 aaKnown RBP21.51■■□□□ 1.03
CTDSP1-205ENST00000452977 FYB1O15117 783 aa21.49■■□□□ 1.03
CTDSP1-205ENST00000452977 LTV1Q96GA3 475 aaPredicted RBP21.49■■□□□ 1.03
CTDSP1-205ENST00000452977 NHSQ6T4R5 1651 aa21.49■■□□□ 1.03
CTDSP1-205ENST00000452977 KIF24Q5T7B8 1368 aa21.48■■□□□ 1.03
CTDSP1-205ENST00000452977 SPON1Q9HCB6 807 aa21.48■■□□□ 1.03
CTDSP1-205ENST00000452977 GGNBP2Q9H3C7 697 aa21.47■■□□□ 1.03
CTDSP1-205ENST00000452977 TXNRD1Q16881 649 aa21.46■■□□□ 1.03
CTDSP1-205ENST00000452977 STK32BQ9NY57 414 aa21.46■■□□□ 1.03
CTDSP1-205ENST00000452977 CGNL1Q0VF96 1302 aa21.45■■□□□ 1.02
CTDSP1-205ENST00000452977 KIF20BQ96Q89 1820 aa21.45■■□□□ 1.02
CTDSP1-205ENST00000452977 KCNQ2O43526 872 aa21.44■■□□□ 1.02
CTDSP1-205ENST00000452977 PTF1AQ7RTS3 328 aa21.44■■□□□ 1.02
CTDSP1-205ENST00000452977 PPP1R1BQ9UD71 204 aaPredicted RBP21.44■■□□□ 1.02
CTDSP1-205ENST00000452977 ACSBG1Q96GR2 724 aa21.43■■□□□ 1.02
CTDSP1-205ENST00000452977 FLT4P35916 1363 aa21.43■■□□□ 1.02
CTDSP1-205ENST00000452977 RRS1Q15050 365 aaKnown RBP21.42■■□□□ 1.02
CTDSP1-205ENST00000452977 CCER1Q8TC90 406 aaPredicted RBP21.42■■□□□ 1.02
CTDSP1-205ENST00000452977 NSD3Q9BZ95 1437 aa21.42■■□□□ 1.02
CTDSP1-205ENST00000452977 INSRP06213 1382 aa21.41■■□□□ 1.02
CTDSP1-205ENST00000452977 PROM2Q8N271 834 aa21.41■■□□□ 1.02
CTDSP1-205ENST00000452977 DDX54Q8TDD1 881 aaKnown RBP21.41■■□□□ 1.02
CTDSP1-205ENST00000452977 ANO8Q9HCE9 1232 aaPredicted RBP21.41■■□□□ 1.02
CTDSP1-205ENST00000452977 MYOM1P52179 1685 aa21.4■■□□□ 1.02
CTDSP1-205ENST00000452977 KAT6BQ8WYB5 2073 aa21.4■■□□□ 1.02
CTDSP1-205ENST00000452977 EIF4G2P78344 907 aaKnown RBP eCLIP21.4■■□□□ 1.02
CTDSP1-205ENST00000452977 ZCRB1Q8TBF4 217 aaKnown RBP21.4■■□□□ 1.02
CTDSP1-205ENST00000452977 RAPGEF4Q8WZA2 1011 aa21.4■■□□□ 1.02
CTDSP1-205ENST00000452977 SLC15A2Q16348 729 aa21.39■■□□□ 1.01
CTDSP1-205ENST00000452977 FBLN1P23142 703 aa21.38■■□□□ 1.01
CTDSP1-205ENST00000452977 BTAF1O14981 1849 aa21.37■■□□□ 1.01
CTDSP1-205ENST00000452977 DCAF8L1A6NGE4 600 aa21.37■■□□□ 1.01
CTDSP1-205ENST00000452977 TATP17735 454 aaPredicted RBP21.36■■□□□ 1.01
CTDSP1-205ENST00000452977 HMGB2P26583 209 aaKnown RBP21.36■■□□□ 1.01
CTDSP1-205ENST00000452977 SLC27A3Q5K4L6 730 aa21.36■■□□□ 1.01
CTDSP1-205ENST00000452977 CARD14Q9BXL6 1004 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms